Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_029024.1 Length=56505 Score E Sequences producing significant alignments: (Bits) Value seq2 2307 0.0 seq28673 390 4e-104 seq3 114 5e-21 >seq2 Length=12201 Score = 2307 bits (2558), Expect = 0.0 Identities = 1720/2006 (86%), Gaps = 16/2006 (1%) Strand=Plus/Plus Query 30791 TGCGATACTCCCCATTCTATAGCGAGATGGACAAGTTTTTTATGAACTTCTTGATCTAAC 30850 ||||| ||||||||||| || || | |||||||| || || || |||| || || Sbjct 8063 TGCGAAACTCCCCATTCAATCGCTAATTGGACAAGCTTAGAGTGCGCTCCTTGCTCCAAT 8122 Query 30851 TTTGCATGTATATATCTTTTAGTATCGATATAGTCATAATTGTGTATTTCTGCAATATAA 30910 ||||| || || || |||| || || |||| ||||| |||||||| ||||||| Sbjct 8123 TTTGCGTGAATGTACTTTTTGGTGTCCTTATATTCATACGCATGTATTTCACTAATATAA 8182 Query 30911 GATATGTTTAGGTGTTCTGTAATTAATTTAGACATGTATTGTGTAGTGGTTATTCCTTTT 30970 || || |||||||| || ||||||||||||||||||||||| ||||| || | Sbjct 8183 TCAATTCCGAGATGTTCTGTGATCAATTTAGACATGTATTGTGTAGTAGTTATATTTTGT 8242 Query 30971 TGGTATGCTGAGGATCTTATTAGTTGTCTTTGTATTTCATTTACGGGGATTTTTACGTCT 31030 ||| | ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||| Sbjct 8243 TGGAACGCTGAAGATCTTATTAATTGTCTTTGTATTTCATTTACGGGGATTTTTACATCT 8302 Query 31031 TTCTTTTTATCGCAACGAGTTTTACGAAGTTGTTGGTTTGTTATTTTAGTAGATTTTCCG 31090 |||||||| || |||||||||||||| ||||||| ||||||||| |||||||||||| Sbjct 8303 TTCTTTTTGTCAGAACGAGTTTTACGAGGTTGTTGATTTGTTATTGTAGTAGATTTTCTA 8362 Query 31091 GAAGGTTCAAACATAGGGTTAACATTGCTCATGATGCTCTCCCCTTTCAAAATTAACCTC 31150 ||| ||||||||||||||||||||||||||||||||||||||||||| | |||||| Sbjct 8363 GAAAAACTAAACATAGGGTTAACATTGCTCATGATGCTCTCCCCTTTCAAATTCAACCTC 8422 Query 31151 CTCCCTC-TCTGTTAACACAGGGTCATAGTTCCAATATGCTATCATTCCTGCTGTTTTTG 31209 ||||| | ||||| | ||||| |||| |||||| |||||||| ||||||||||||||| Sbjct 8423 CTCCCCCCTCTGTATTCTCAGGGACATAATTCCAACATGCTATCGTTCCTGCTGTTTTTG 8482 Query 31210 AGAAAAGAGAGGAGGGATCTTATATTTTTGTTAGATA--GTTATTACCAATCGTTGAAAC 31267 ||| || ||||| ||| | | |||||| ||| ||| | | ||| | | || Sbjct 8483 AGAGGAGGGAGGAAGGAG-TAAAATTTTTCTTACATAAAGCTTTTATCTA-------AAT 8534 Query 31268 CATTAATTAACTCCATAGCATTATCGACAGCTTCTTCAGAAGGTTTCTCATCTTCTCCTG 31327 | | ||| |||||||||||||| || ||||||||||||| || |||||| |||||| Sbjct 8535 TAGCTAGTAAATCCATAGCATTATCAACGACTTCTTCAGAAGGCTTTTCATCTACTCCTG 8594 Query 31328 CATCATTCTGTATGCCATGAGTATTTATATTGATTAATAGCTTTTTAACTAATTGAAGCG 31387 |||||||||||||||||||||||||||||||||||| || ||| |||||||||||||| | Sbjct 8595 CATCATTCTGTATGCCATGAGTATTTATATTGATTAGTAACTTCTTAACTAATTGAAGTG 8654 Query 31388 GATCTTCTTCACCAGCAACTTCAGCAAGTACCTGGTACATTTCTAATCtttttttAATCT 31447 |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 8655 GATCTTCTTCTCCTGCAACTTCAGCAAGTACCTGGTACATTTCTAATCTCTTTTTAATTT 8714 Query 31448 GCTTATTTACGTAACCCTTTTGCCCCTTACCTTGTTCCTCTAAACGAGTTACAAAGTTGT 31507 | |||||||| || || ||||| || ||||||||||||||||| |||||||| ||||| | Sbjct 8715 GTTTATTTACATACCCTTTTTGTCCTTTACCTTGTTCCTCTAATCGAGTTACGAAGTTAT 8774 Query 31508 AAAGGACCTTATCATTGTTAGGGTTAAGCTCAATTTGCAGCTTTTTCTTTTGTAAGTTTG 31567 | || ||||| |||||||| || || ||||||||||| |||||||||||||||||||||| Sbjct 8775 ACAGAACCTTGTCATTGTTTGGATTTAGCTCAATTTGAAGCTTTTTCTTTTGTAAGTTTG 8834 Query 31568 TCAAAGACATCACATCCTAAATAGTAGTATCCTAATAGGTTAGCTTCTTGACCATTTTCT 31627 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 8835 TCAAAGACATCACATCCTAAATAGTAGTATCCTAATAGGTTAGCTTCTTGACCGTTTTCT 8894 Query 31628 AGAACCGCAAATGTTGGGAATTGCTCTTTTTTCTTCTCAATACGCTTTTTATGAAGAGCA 31687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8895 AGAACCGCAAATGTTGGGAATTGCTCTTTTTTCTTCTCAATACGCTTTTTATGAAGAGCA 8954 Query 31688 GCCATTCCGCCAGTCCAAACGATTTTATCGTATACAGCTAAGTTAAACTTTTGAGACACT 31747 |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||| ||| Sbjct 8955 GCCATTCCACCAGTCCAGACGATTTTATCGTATACAGCTAAGTTGAACTTTTGAGAAACT 9014 Query 31748 TCACGTAACGCTGCATCGAAATGACGTTGTAATTCTTCATCTACTTTCTCAGCTACATCT 31807 |||||||| |||||||| |||||||||||||| |||||||| || ||||||||||| ||| Sbjct 9015 TCACGTAATGCTGCATCAAAATGACGTTGTAACTCTTCATCAACCTTCTCAGCTACGTCT 9074 Query 31808 TTATGAGTGTATAAGTCGTATAGAGAGCCATTGTACTTATAGCCATTTTCAAGGATATAG 31867 |||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |||||| Sbjct 9075 TTATGAGTGTATAAATCGTATAGAGAGCCGTTGTACTTATAGCCATTCTCAAGAATATAG 9134 Query 31868 TGCATGTTAGAAACACTTAAATCAGGTGTTTCGCCAATGTTATCGCGTACAATTTGTTCA 31927 |||||||| || || ||||||||||||||||| |||||||||||||| || ||||||||| Sbjct 9135 TGCATGTTCGACACGCTTAAATCAGGTGTTTCACCAATGTTATCGCGAACGATTTGTTCA 9194 Query 31928 ATAGCCATGAATGCTTTCTCGCAACCTAATTCAGTTCCTAAACGGTCGATAACAGCATTA 31987 |||||||| ||||||||||| || |||||||||||||||||||| || |||||||||||| Sbjct 9195 ATAGCCATAAATGCTTTCTCACAGCCTAATTCAGTTCCTAAACGATCAATAACAGCATTA 9254 Query 31988 CCAGACATATCAGTAACATCGAATGTACCGAATCCACCATCAATGATAAGGATACGATCT 32047 |||||||||||||||||||| ||||| || || |||||||| || ||||| ||||||||| Sbjct 9255 CCAGACATATCAGTAACATCAAATGTGCCAAACCCACCATCGATAATAAGAATACGATCT 9314 Query 32048 TCTTTATTAATAATTTCtttttttACCAGGTAATATTGTGTTCCTACTGGTTGTGGGATT 32107 |||||||||||||||||||| || || | |||||| || || || || ||||| || || Sbjct 9315 TCTTTATTAATAATTTCTTTCTTCACTAAGTAATACTGAGTGCCGACGGGTTGCGGAATA 9374 Query 32108 ACTAAACACTCTTTTACTTTAACTGTGATTAATTCACCGTTTACTTTCACTGCTGTTTCT 32167 ||||| || | ||| ||||||| ||||||||| | || |||||||| |||||||||||| Sbjct 9375 ACTAAGCATTGTTTCACTTTAATTGTGATTAACTGGCCATTTACTTTTACTGCTGTTTCT 9434 Query 32168 TCCATAGCGACCTTACGAATTGATTCGCGTTGATTACCGAAGTGAGATACTGGAAGACCG 32227 |||||||| || || |||| ||||| ||||||||||| ||||| |||||||||||||| Sbjct 9435 TCCATAGCTACTTTTTGAATCGATTCACGTTGATTACCAAAGTGTGATACTGGAAGACCT 9494 Query 32228 GTAACAAGTAACGGAATAGTAACGTTCTTCTTAAAGTCTTTTGCAATGAATCCGAATAGC 32287 ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| Sbjct 9495 GTAACAAGTAACGGAATTGTAACGTTCTTTTTAAAGTCTTTTGCAATGAATCCAAATAAT 9554 Query 32288 TGTTTCTTAAACGTTGGATCCTCATAACGTTTTGCTTTGTTCTCGCCAAGCGCGCGAATT 32347 || |||||||| |||||||||||||| || || ||||| ||||||||||| || || ||| Sbjct 9555 TGCTTCTTAAATGTTGGATCCTCATAGCGCTTCGCTTTATTCTCGCCAAGGGCACGGATT 9614 Query 32348 AATGGAAGTTTTGATTTTCTAGCTTCTTCTCCTATGTAGTAAGGGAAGTCGGTGTTCGTT 32407 ||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||| Sbjct 9615 AATGGTAGTTTGGATTTTCTAGCTTCTTCTCCTATGTAGTATGGGAAGTCAGTGTTTGTT 9674 Query 32408 AATTCAATTTTTGTGAAACTAGCTTCGTTGTAGTAGTCATCAACAGGCGCTAACACCGAT 32467 | ||||||||| |||||||||||||| ||||||||||| || ||||| || ||||| ||| Sbjct 9675 AGTTCAATTTTCGTGAAACTAGCTTCATTGTAGTAGTCGTCTACAGGAGCCAACACAGAT 9734 Query 32468 AATTCTGTAATAACATCAGCCTCTAGTGATTTGTTTTTCTTTGAAGCACGCTTTGTAAAA 32527 ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||| Sbjct 9735 AATTCTGTAATAACATCTGCCTCTAGTGATTTATTTTTCTTTGAAGCGCGTTTTGTAAAG 9794 Query 32528 CCATTTCCTAAGTCAATCGCATACGGATTTCCTAATAGCATATATATTCCCCTTTCAAAA 32587 |||||||||||||||||||| || ||||||||||||| |||||| |||||||||||| || Sbjct 9795 CCATTTCCTAAGTCAATCGCGTATGGATTTCCTAATAACATATACATTCCCCTTTCATAA 9854 Query 32588 CCAATGGTTAATCATTGATATTTTTGATTCTAACAGATACTTACGTTTAAATTCAATGAA 32647 ||| || |||||||||| || |||||||||||||||||| ||||| | |||||| || Sbjct 9855 CCATTGATTAATCATTGGTA-TTTTGATTCTAACAGATATTTACGCTAGGTTTCAATAAA 9913 Query 32648 ATATACCAAAAACGCTAAATTTATTATTGGTTAATCATTGATTATTAGTTTT--CAAGGT 32705 |||| |||||||| ||| || |||| |||| ||||| || || |||| | |||| Sbjct 9914 ATATGCCAAAAACAACAAA-ATACAATTGATTAACCATTGGTTTGTACTTTTTGCGAGGT 9972 Query 32706 TATAGGGCATCGCAAAGGCTTCGCAATATTAATAAAAATGCATGTTGCGAGGTAGGGAAG 32765 | | | |||||| |||||||| | ||| || ||||||| ||| | ||||||||||| Sbjct 9973 CGTTAGTCTTCGCAATGGCTTCGCTAAATTTAT-AAAATGCGTGTAGAAAGGTAGGGAAG 10031 Query 32766 ACATAGGCTTGTCCTCCCTAAGATTC 32791 |||| ||||||||||||||| |||| Sbjct 10032 CCATAAGCTTGTCCTCCCTAATATTC 10057 Score = 1021 bits (1132), Expect = 0.0 Identities = 761/888 (86%), Gaps = 2/888 (0%) Strand=Plus/Plus Query 28306 AATAA-AAATAGCCCCGTTTTTCACGAAGCTACATCCAAAAATCATCGTAATGAACATCT 28364 ||||| |||||||||||||||| ||| |||||||||||||| ||||| ||||| |||||| Sbjct 7124 AATAATAAATAGCCCCGTTTTTAACGGAGCTACATCCAAAAGTCATCATAATGTACATCT 7183 Query 28365 TTATTTGTTATCTTTTTCAAAGCTCTCACAATCTTTTGTGCATTCTTCATTGTTGGAGAG 28424 || || |||| || ||||| ||| | | ||||||||||||||| ||||| ||||| || Sbjct 7184 TTGTTAGTTAATTTCTTCAATGCTTTTATAATCTTTTGTGCATTTTTCATGGTTGGCGAA 7243 Query 28425 AATTTATCACCTTGGCATACGCGACTTATTGTAGATTTACTTACACCGCTTCTTTCTGCT 28484 |||||||| ||||||||||| ||||| || || ||||||||||| ||||||||||| ||| Sbjct 7244 AATTTATCTCCTTGGCATACACGACTAATAGTCGATTTACTTACCCCGCTTCTTTCCGCT 7303 Query 28485 AATTCTTGCTGAGTAATTTTGTTTTTCTCCAGAAAATTGGAGAGCTTTGACTTTCTCCCT 28544 ||||| || |||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 7304 AATTCCTGTTGAGTAATTTTGTTTTTCTCCAGAAAATTGGAGAGCTTCGATTTTCTCCCT 7363 Query 28545 TTGCCAGAAATAAGCCATCCCATTCTAATCACTCCTGTTTTAAGTTCTTAGTACAAGAGT 28604 || ||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| Sbjct 7364 TTACCAGAAATAAGCCATCCCATTTTA-TCACTCCTGTTTTAAATTCTTAGTACAAGAGT 7422 Query 28605 GGCCAAAGATTTCATTTTTTAAACATCCCGAAAATAGGAATCTTAATTATTATGAAAATC 28664 || |||||||||||||||||||||||| | |||||||||| |||| | |||||||||| Sbjct 7423 GGTCAAAGATTTCATTTTTTAAACATCTCAAAAATAGGAAATTTAAACACTATGAAAATC 7482 Query 28665 TGCGTTTCAGTAGGGATAGTTTCTTTCCAGGTTCTTCAGCATAATATTTCATGTAGTCAC 28724 | || |||| | ||||||||||| || ||||||||||||||| | ||||||||||| Sbjct 7483 TTCGCTTCAACAAAGATAGTTTCTTCCCTGGTTCTTCAGCATAAAACCGCATGTAGTCAC 7542 Query 28725 ACATTAAGATATTAATCAATTTATCAGCGGTATATCCATGCATAGGGTAGGTGTGAGCCA 28784 |||| | ||||| || ||||| ||||| ||| | || ||||||||| | | ||||||| Sbjct 7543 ACATCAGAATATTGATTAATTTTTCAGCTGTAAAACCGTGCATAGGGAAACTATGAGCCA 7602 Query 28785 TATCAGAGAAAAACACTTCAATTCTTCTCAATGTCCTTCTATCAATCTTCACTTCAACTG 28844 |||| || |||||||||||||||| ||| ||| ||| ||||||||| || || || || Sbjct 7603 TATCCGAAAAAAACACTTCAATTCGTCTTAATATCCGTCTATCAATTTTTACAGAAATTG 7662 Query 28845 TTCCGTACCTTTCATCATTTTCATTAAATTCTAATTCGCAATCTGTATAGTGCTTCTTAC 28904 | ||||| | || |||||||||||||| || || | |||| ||||| || ||||| | Sbjct 7663 TACCGTATCGATCGTCATTTTCATTAAACTCCAAATTAAAATCCGTATAATGTTTCTTGC 7722 Query 28905 TCTCTAGAATTTGATACAACTGCTCCATACTATTCTTGGATCTTATATGTTCCAGAAAGT 28964 ||||||| |||||||||| ||||||||||||||| || || | ||||||||| ||||||| Sbjct 7723 TCTCTAGGATTTGATACAGCTGCTCCATACTATTTTTAGAGCGTATATGTTCAAGAAAGT 7782 Query 28965 CCTCAACAAGTATCTCAGCTAAATCACTAGCGTTACACTCGTAATCTTCCTCTTCCATAT 29024 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 7783 CCTCAACAAGTATCTCAGCTAGATCACTAGCATTACACTCGTAATCTTCCTCTTCCATAT 7842 Query 29025 CCTCAATGATAATATTCATGCGGAATAAGTAAATTTTGAGCATCTTCACTTCAAAACGGT 29084 | || || ||||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct 7843 CTTCGATAATAATATTCATTCGAAATAAGTAAATTTTGAGCATCTTCACTTCAAAACGGT 7902 Query 29085 ATTTCTCTTTTAAAGCCCACTCAATTTTAGTCCGTTCCCACCAGTTCCCAGCACTCATTA 29144 | ||||||||||| ||| |||||||| || || |||||||| || | ||||||||| | Sbjct 7903 ACTTCTCTTTTAACTTCCATTCAATTTTCGTTCGCTCCCACCAATTACTAGCACTCATAA 7962 Query 29145 GCTGTATTTCTTTCGTCATCACATCGTACTTACTGTACATGCTGTCAC 29192 ||||||||||||||||||| || ||||| ||||| ||||||| |||| Sbjct 7963 GCTGTATTTCTTTCGTCATAACGTCGTATTTACTATACATGCGCTCAC 8010 Score = 767 bits (850), Expect = 0.0 Identities = 489/539 (91%), Gaps = 28/539 (5%) Strand=Plus/Plus Query 23815 TAAGAACACTACGAGCTACTGAAAATATATCTGCTACAGGGCGTATGTGGGCGCAAGAAT 23874 |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct 3104 TAAGAACATTACGAGCGCAAGAAAATATATCTGCTACAGGACGTATGTGGGCGCAAGAAT 3163 Query 23875 TTATCCCCAATTCTTCTCGTACGCTTAAAATGGACATAGAAGACCTTCCATTCTCTGCTT 23934 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 3164 TTATCCCTAATTCTTCTCGTACGCTTAAAACGGACATAGAAGACCTTCCATTCTCTGCTT 3223 Query 23935 TAGATAAAATCAACTCTGTAAACATCAAACAGTATCACTTTATAAGAGATGTTGAACGCT 23994 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3224 TAGATAAAATCAACTCTGTAAACATCAAACAGTATCACTTTATAAGAGATGTTGAACGCT 3283 Query 23995 TCGAGTCAGGGGAGTCTATTACACTTCCAATTAATTACGGTATGATTGCGGAGGACACTG 24054 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| Sbjct 3284 TCGAGTCAGGGGAATCTATTACACTACCAATTAATTACGGTATGATTGCGGAGGACTCTG 3343 Query 24055 ACGATGTATTCACCACACCACAGAAAGACGCTATAAAACTTTATAGCTCTGTTGCAATTT 24114 |||||||||||||||||||||| ||||||||| ||| |||||||||||| |||||||||| Sbjct 3344 ACGATGTATTCACCACACCACAAAAAGACGCTGTAACACTTTATAGCTCGGTTGCAATTT 3403 Query 24115 CTATTCAAGCAATACAAGAAGTTGACTTTAAAGTTGAAAATCTTCAATTTGACCACGGTA 24174 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 3404 CTATTCAAGCAATACAAGAAGTTGACTTTAAAGTTAAAAATCTTCAATTTGACCACGGTA 3463 Query 24175 TGTTGAAGCAGGAAGTTGACACTCTTAAAGAACAACTTGAAGCAGAAAAACTTGAGAAGA 24234 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3464 TGTGGAAGCAGGAAGTTGACACTCTTAAAGAACAACTTGAAGCAGAAAAACTTGAGAAAG 3523 Query 24235 TTTCAATGAAAGCTGAAATTGATGAATTAAAGGTATTAGTGCAACAATTACTAAACAAAT 24294 |||||||||||||||||||||||||||||||||||||||| Sbjct 3524 TTTCAATGAAAGCTGAAATTGATGAATTAAAGGTATTAGT-------------------- 3563 Query 24295 AAACCGAAACAACAATTAATAAATGAGAAACCAGAGCAGCCATAAGCTGGTCttttttt 24353 ||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct 3564 --------ACAACAATTAATAAATGAGAAACCAGAGCAGCCATAAGCTGTTTTTTATTT 3614 Score = 405 bits (448), Expect = 2e-108 Identities = 291/333 (87%), Gaps = 2/333 (1%) Strand=Plus/Plus Query 357 AAGAAGTATACACAATAGAGCAAGCAAATGGACAATTCGCAAAAGATTCTTATGTAAGAG 416 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2240 AAGAAGTATACACAATAGAGCAAGCAAATGGACAATTTGCAAAAGATTCTTATGTAAGAG 2299 Query 417 ATATGGAAAACTCGTCTTCAGTTAACTGAAAAGGGCGTTAGTATATCTGTAAAAGAAAAT 476 ||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| || Sbjct 2300 ATATGGAAACC-CGTCTTCAGTTAACTGAAAAGGGCGTTAGTCTATCTGTAAAAGAGAAC 2358 Query 477 GATGTAATTGCAGCATTCAATATGAGTAAAGAAAACAT-ACTTTGAATGCAAACAGGATT 535 ||||||||||||||||| |||||||| ||||||||||| || |||||||| ||||| ||| Sbjct 2359 GATGTAATTGCAGCATTTAATATGAGCAAAGAAAACATTACGTTGAATGCGAACAGAATT 2418 Query 536 AACTTAAGAGGTTTTATTACAGCAGACCATATCAAAGGGCAAGTTTTAGAAGGAGTAACA 595 |||||| |||||| ||||||||| | ||||| ||||| ||||||||||||| ||||| Sbjct 2419 AACTTAGTAGGTTTCATTACAGCAAATCATATTAAAGGAAAAGTTTTAGAAGGGGTAACG 2478 Query 596 CTTAGAACTACTGGAAGTAGATTTGTTGAAATAAACCAGCAAAACTTTAAGATTTTTGAT 655 |||| ||| | ||||| ||||||||||||||||| ||||| || | |||||||| ||| Sbjct 2479 CTTAAAACAAGTGGAAACAGATTTGTTGAAATAAATAAGCAAGACATGAAGATTTTCGAT 2538 Query 656 GCAAACAAACCTCGCGGTTATATGGGATTTATG 688 | | || || || || ||||| ||||||||| Sbjct 2539 TTAGATAAGCCACGTGGCTATATAGGATTTATG 2571 Score = 105 bits (116), Expect = 2e-18 Identities = 303/461 (66%), Gaps = 10/461 (2%) Strand=Plus/Plus Query 27021 AAAAGGAGATGTTGAATAATGGAAATCAAACAAATGTTAGTGCCAAGAAGTCGATACGAT 27080 ||||||||||||| |||||||||||||| | ||| ||||| ||| ||| | | Sbjct 5186 AAAAGGAGATGTTTAATAATGGAAATCAGAAAAAATTTAGTTGATGCAAGCAAATATGGT 5245 Query 27081 GCCTTATGCCCGTATGAGATGAATCCAACAGAAATCACATTTCATAACACGTACAACGAC 27140 | ||||| ||| ||||||||| | || || | || || || || ||||| Sbjct 5246 ACTAAGTGCCCTTATACAATGAATCCAGAATTCATTACTGTCCACAATACTTATAACGAT 5305 Query 27141 GCACCGGCTATAAATGA----GCGTA-ATAATGTCGCTAACAATAGCACTGGAACATCAT 27195 || | || | || || || || || || ||| ||| ||| | | | || | Sbjct 5306 GCTACAGCAAATAACGAAGTGGCTTATATGAT-TCG-TAATGATAACCAAGTA---TCGT 5360 Query 27196 TTCATATCGCTGTGGATGATAAAGAAGCTATTCAGTTAATTCCTTTTAACAGAAATGCAT 27255 ||||||| || || || |||||||||||| | || |||||||| | | || || | Sbjct 5361 TTCATATTGCGGTAGACGATAAAGAAGCTGTACAAGGTATTCCTTTAGAGCGTAACGCTT 5420 Query 27256 GGCACGCTGGAGATGGTAATGGGAGAGGGAATCGTCATAGTATTGGGGTGGAAATTTGTT 27315 |||| || |||||| || | || |||||| | |||||| || ||||| |||| Sbjct 5421 GGCATTGCGGTGATGGTGGCGGTAACGGAAATCGTAAATCTATTGGAGTTGAAATCTGTT 5480 Query 27316 ATTCACAATCAGGCGGAGCGAGATATCGCAAGGCTGAATTAAATGCAATTGAAGTAATCG 27375 | || | | || |||| ||||| || || || |||||| | || | | Sbjct 5481 ACTCTCTAAGTGGTGGAGATCGATATTATAAAGCGGAGGATAATGCAGCTATCGTCGTAG 5540 Query 27376 CCCAATTAATGATTCAGTTTGATATTCCAATCAGTAAAGTTAAGACTCATCAAGAGAGAA 27435 | | |||| |||| |||||||||| ||||||||| || |||||| | | Sbjct 5541 CTGGGCTCATGAAACAGTACAATATTCCAATTAGTAAAGTTCGCACACATCAATCATGGA 5600 Query 27436 ACGGGAAGTACTGTCCGCATCGAATGTTAGATGAAGGACGT 27476 || ||||| ||||| ||||| ||||||| ||||||||| Sbjct 5601 GTGGAAAGTATTGTCCTCATCGTATGTTAGCAGAAGGACGT 5641 Score = 102 bits (112), Expect = 3e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 22044 GGTCTTAAACCAAATAAAACGCTATGGCGTGATATTAGTGGTGGTAAGCCTGGTATTTTG 22103 || |||| ||| |||| || || |||||||||||||| ||| ||||||||||||||| Sbjct 193 GGGCTTAGACCTTATAAGACACTTTGGCGTGATATTAGCAATGGAAAGCCTGGTATTTTG 252 Query 22104 AAAATATGGACAGGTGAAGCGTGGGATGTTGTCGTTCCGGATGTCGAGGAAGTTAA 22159 |||||||||||||| | ||| ||||| ||||| || ||||| || |||||| Sbjct 253 AAAATATGGACAGGCGCAGCTTGGGAATCGGTCGTACCTGATGTTGATTCAGTTAA 308 >seq28673 Length=3150 Score = 390 bits (432), Expect = 4e-104 Identities = 538/753 (71%), Gaps = 17/753 (2%) Strand=Plus/Plus Query 37080 TTTAAAGGTGTTTATACGTTAAAATAAGGAGTGTGAGACCTACATAAAATACTTTTTCAC 37139 |||||| || ||| | | ||||| | |||||| | |||||| ||||||||||| | Sbjct 1793 TTTAAAATTGCTTACAAGCGAAAATGAAAGGTGTGATAGCTACATGAAATACTTTTTAAT 1852 Query 37140 CAAGTATGTATATTCCACTAAGAGGTTTAGTGCTTTCTTTTGTGGTTCTGTGTCTAGTTT 37199 ||||| |||||||| ||||| || || || |||||||||| |||||||| |||| | Sbjct 1853 TAAGTAAGTATATTCGACTAAAAGATTGAGCGCTTTCTTTTTAGGTTCTGTATCTAAATC 1912 Query 37200 AGAAATTTGATCTAATATGACCTCGACTTGTGGTGGTATCCGGTATTCTCTGCCGACCAG 37259 || ||||||||||| ||||| |||| ||||| || || || ||| ||||| || || Sbjct 1913 GGATATTTGATCTAAAATGACTTCGAACTGTGGAGGCATTCGATATGTCCTGCCAACTAG 1972 Query 37260 ATTGTCCAGACTAATGTTATATAGATCAGCAATCTTGATTAGAGTAGAAACGTCAGGTTC 37319 || || || || | || |||| |||| || || || ||||| || || || ||||| Sbjct 1973 GTTATCGAGGCTGACATTGTATATATCACTAAGTTTAATGAGAGTTGATACATCTGGTTC 2032 Query 37320 AGATCTTCCCGCTTCCCAATTGGTATATGTTGAACGAACAACATTAAGATGGTGAGCAAC 37379 ||| | ||| |||||||| || |||||||||||||| |||||||| | | ||| ||| || Sbjct 2033 AGACCGTCCTGCTTCCCAGTTTGTATATGTTGAACGGACAACATTCAAACGGTAAGCGAC 2092 Query 37380 ATCATTTTGAGTAAGTTTGTTTTTCTTTCGAAAGTATATAAGTCGTTCGCTAAGCAATGA 37439 ||||||||| || | |||||||||||| |||||||||| |||||||||||||||||||| Sbjct 2093 ATCATTTTGTGTTAATTTGTTTTTCTTGCGAAAGTATACTAGTCGTTCGCTAAGCAATGA 2152 Query 37440 CTATTCACCGCCCTTTTTTATCTGTGACAATTATAAGCGAACGAGCAAAGTA--AATGGT 37497 |||||||||||||||| | |||| |||||||||||||||||||| ||| |||||| Sbjct 2153 CTATTCACCGCCCTTTATAATCTTCGACAATTATAAGCGAACGAG--TGGTAATAATGGT 2210 Query 37498 ATATATTTGGATAAAACGATTAATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 37557 ||||||| | || | ||||||||| Sbjct 2211 ATATATTCGAATGGTATGATTAATTATGTGACCTTTATGTTATGTGAAGATTCATTATGA 2270 Query 37558 NTCATGATAAAAATACTTAGAACAAAAGTTCGATTTTATGGTAATATATGCATGTGAGGT 37617 || || ||||| |||| | |||||| ||| |||||| |||| ||| | | Sbjct 2271 GTCTGTGTAGAAATAAAAGGAACGAGAGTTCGTATTTGTGGTAAAATATTCATACAGGTT 2330 Query 37618 CTTCAAGCG-TTCCATGCATAATTGCATATTTTATT-TTTGTATCGCTTGAGAAACCTTG 37675 | || || | |||||||||||||| ||||||| |||| | | |||| ||| Sbjct 2331 CAAAAAACGATGAAATGCATAATTGCATTTTTTATTCCATGTAATACAT--AAAACGTTG 2388 Query 37676 ATAATAAGGGATTTCTTAATTTTCTCAATAATTGTCTGATAACTGCATGACtgaaatttg 37735 ||| ||| | ||| | ||||||||||||| || || || | | | ||| ||| |||| Sbjct 2389 ATACAAAGCGGTTTTTCAATTTTCTCAATAGTTTTCAGACTATTATACGACAGAATTTTG 2448 Query 37736 ccaaaaatgtgatattatgaaaacaaataaaataaacggacgtgaaaaaaGACCCAC--- 37792 ||| |||| |||||||| ||| |||||| ||||||| ||||||||| ||| Sbjct 2449 GGAAATTTGTGGTATTATGATAAC-AATAAA--AAACGGAACGAAAAAAAGACTCACAGC 2505 Query 37793 -GGTGTAAGTAGTG-CTGGTAACACTCTTACAC 37823 ||||||| |||| | | ||||||||||| Sbjct 2506 GTGTGTAAG-AGTGATTTGGCCCACTCTTACAC 2537 Score = 132 bits (146), Expect = 2e-26 Identities = 90/100 (90%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 36801 TTGTTTCCTCCAGTTATGTAAAATGTAAGATTTCCGAGCCTATCATAGCAAACAATCAAT 36860 || || ||||||||||||||||||||||||||||||||| |||||||||||||| | ||| Sbjct 1223 TTATTACCTCCAGTTATGTAAAATGTAAGATTTCCGAGCTTATCATAGCAAACATTTAAT 1282 Query 36861 TCGAATATTGTCATATTTTGTCGAA-AGAAAATAAAAAAG 36899 | |||||||||||||||||||||| ||||| ||||||| Sbjct 1283 TATAATATTGTCATATTTTGTCGAACAGAAATGAAAAAAG 1322 Score = 122 bits (134), Expect = 3e-23 Identities = 122/154 (79%), Gaps = 7/154 (5%) Strand=Plus/Plus Query 36032 TAAAGAAAAGACACCCAAAGGTGCCTTCCTCCGACTTGATAACCACTTTAATTTTAATAA 36091 |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct 173 TAAAGAAAAGACACCCTAAGGTGCCTTCCTTCGACTTGATAACCACTTTAATTTTAATAA 232 Query 36092 TATGAGTGTT----GGATTCTCATCCAATATC-ATTATATCACATTATAGAATGTTAGAA 36146 ||| ||| | || || | ||||| | ||| || || ||| || ||| Sbjct 233 CGAGAGAGTTAATAGAATACT-ACCCAATTCCTATTTTACCATATTTATCTATATTA-TT 290 Query 36147 GATTGAGAAAAAAGAAAAGCACTCTTTCGAGTGC 36180 ||||||||| || |||||||||||||||||||| Sbjct 291 CATTGAGAAATAATAAAAGCACTCTTTCGAGTGC 324 >seq3 Length=4151 Score = 114 bits (126), Expect = 5e-21 Identities = 71/75 (95%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 55491 ATTAAATCAATATCAATTATCGTAGGCGCTGCCGTGATCTGGGTGGCGTCTTGTTTGTTG 55550 |||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 2363 ATTAAACCAATAGCAATTATCGTAGGCGCTTCCGTGATCTGGG-GGCGTCTTGTTTGTTG 2421 Query 55551 TTAAGGAAAGATAAG 55565 ||||||||||||||| Sbjct 2422 TTAAGGAAAGATAAG 2436 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180590552330838