Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22]
48,397 sequences; 282,201,865 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq5564 84.2 2e-11
>seq5564
Length=26244
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || ||||| || || |||||||| ||||| | || ||||| || |
Sbjct 5117 ATGCAAATCTTCGTGAAGACACTGACTGGGAAGACCATTACTTTGGAGGTCGAGAGTTCA 5176
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || ||||| || || ||| || ||||| || ||| |||| ||| |
Sbjct 5177 GATACCATTGACAAT--GTGAAGGCAAAGATTCAAGACAAGGAGGGTATTCCCCCGGATC 5234
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| |||| |||||||| || || || | || || | | | ||| | || ||||
Sbjct 5235 AGCAGAGGTTGATTTTTGCAGGGAAGCAGCTTGAGGATGGGAGGACTTTGGCAGACTACA 5294
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
||||||| |||||| || | |||||||| ||||| |||| || ||
Sbjct 5295 ACATCCAGAAAGAGTCAACCCTCCATTTGGTCCTGCGTCTGCGAGGAGG 5343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355652498678019
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |