Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Linum_20usitatissimum_20[genbank_20GCA_5F000224295.1_202011-08-22] 48,397 sequences; 282,201,865 total letters Query= NC_031027.1 Length=162359 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=12201 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/198 (71%), Gaps = 6/198 (3%) Strand=Plus/Minus Query 27125 ACGACCTTCATCTAACATACGGTGTGGGCAATATTTACCATTACGCTCTTGGTGAGTCTT 27184 ||| ||||| |||||||||| || || ||||| || ||| | | ||| || || Sbjct 5641 ACGTCCTTCTGCTAACATACGATGAGGACAATACTTTCCACTCCATGATTGATGTGTGCG 5582 Query 27185 AACTTTAGAGATTGGGATATTAAAACGTACCATTAAATCTGAGATATGCTCGATAGC--- 27241 ||||||| ||||| ||||| | || ||| | | || || | ||||||| Sbjct 5581 AACTTTACTAATTGGAATATTGTACTGTTTCATGAGCCC--AGCTACGA-CGATAGCTGC 5525 Query 27242 ATTTAACTCAGCTTTACGATAACGCTCTCCACCACTCATAGAGTAACAGATTTCTACACC 27301 ||| ||| |||||| ||| || ||||||||||| | ||||||||||||||| || || Sbjct 5524 ATTATCCTCCGCTTTATAATATCGATCTCCACCACTTAGAGAGTAACAGATTTCAACTCC 5465 Query 27302 GATAGAGTTACGGTTACC 27319 ||||| ||||| || || Sbjct 5464 AATAGATTTACGATTTCC 5447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519106569894280