Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1704 156 4e-33 seq32367 147 2e-30 seq42527 127 2e-24 seq36964 127 2e-24 >seq1704 Length=114806 Score = 156 bits (172), Expect = 4e-33 Identities = 390/585 (67%), Gaps = 7/585 (1%) Strand=Plus/Minus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| || || ||||||||||| || | |||||||| | ||| || ||||| || | Sbjct 97654 ACAACAAGCACGCGAAATCGCAGTGAAGCCCCTCGTCGCGTGAGATCAGCTCGTTGGAGA 97595 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || | ||| ||||| || ||||| || ||||| || |||||| ||| ||| | Sbjct 97594 ACGTGAGCCCCGGCATGAGACCGCGTTTTTTCAACCAGAAGATCGCGCAGAAGCTCCCGG 97535 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || || || ||| | || || || | | || || ||| | | | | Sbjct 97534 AGAAGAAGATCCCTTCCACGCAGGCGAAGGCAACCACCCGCTCCGCGAAGGAATCCGATG 97475 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 || ||| |||||||| | ||||||||||||| | | | ||| || ||||| | Sbjct 97474 CGT--CGA-TCCATTTCATCGCCCACTCGGCTTTCTTCGCGACGCAGGGGATGGTTTCGA 97418 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAG-GTCGATTATATACGTATCGATGAGTAGG 17254 ||| | || | | ||| || || | ||| | || || || || | || ||| Sbjct 97417 CGGCGTGGAAGAGGCGGTGTTTCTCG-GTGGAGTCCTTGATGTAGGTTTCTAACAGGAGG 97359 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 |||||||| |||||||| |||||||| ||||| ||||| || ||||| ||| || ||| Sbjct 97358 CTGTACATCTCGGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGTGCT 97299 Query 17315 TCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCG 17374 || || ||||| ||||| ||| | | | || ||||||||| |||||||||||| Sbjct 97298 TCGGCGATTTGGACTTCTTTCATGAACCTTCCGGCGAGATTTTCGAGGACGATGCCGTCG 97239 Query 17375 CTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTG-TAAGAAC 17433 |||||||| || || | | || | ||||| | |||| ||| | | || Sbjct 97238 GAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAGTGGCGTTCG-CCGTCGTTGAGGGA 97180 Query 17434 GCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCAC 17493 | |||||| | || | ||| | || |||||||||| |||||| || || | Sbjct 97179 GTCCCAGTCGCGGAGGTCGTGGGAGAGGTCGACTTCTTCGGCGGTCCAGAAGGAGGCGAG 97120 Query 17494 TGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 || || || ||||| | ||| || || |||||| || ||||| Sbjct 97119 GGCTTTCTTGTACATTTGCCAGATTTCGGGGTATTGGATTGGGAA 97075 >seq32367 Length=12065 Score = 147 bits (162), Expect = 2e-30 Identities = 261/378 (69%), Gaps = 2/378 (1%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 |||||||||| ||||| ||||| || | |||||||| | | ||| || ||||| || | Sbjct 2391 ACATCAGACACGCGAAGTCGCAGTGGAGCCCCTCGTCACGGGAGATCAGCTCGTTGGAGA 2450 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 |||| | ||| ||||| || || ||||| | ||| || || ||| ||| ||| | Sbjct 2451 ATGTTAGCCCCGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTCCCGG 2510 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || || || || | || ||||||| | ||||| ||| | | ||| Sbjct 2511 AGAAGAAGATTCCTTCCACACACGCGAACGCGACAAGCCGTTCCGCGAAGAAAGTATCTG 2570 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 | | ||||||||| | ||||||||||||| | | ||| |||| | ||||| | Sbjct 2571 TCGAGTGGATCCATTTCAGGGCCCACTCGGCTTTCTTCCTTACGCAAGGAACAGTTTCGA 2630 Query 17196 TGGCCTTAAATAATTT-CTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGG 17254 | || || | | | ||||| | | | || || | || || || || | ||| | Sbjct 2631 TTGCACGGAAGAGTCTGCTCTTCTCCGCGGAG-TCCTTAATGTAGGTTTCTAAGAGCAAA 2689 Query 17255 CTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCT 17314 ||||||||||| ||||| |||||||| ||||| ||||| |||||||| ||| ||||| Sbjct 2690 CTGTACATTTCCGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGGCGCGGGCC 2749 Query 17315 TCCGCTATTTGAACTTCC 17332 || || ||| ||||| Sbjct 2750 TCAGCGGATTGGCCTTCC 2767 >seq42527 Length=94160 Score = 127 bits (140), Expect = 2e-24 Identities = 291/436 (67%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| || || ||||||||||| || | |||||||| | || || ||||| |||| Sbjct 58002 ACAACAAGCACGCGAAATCGCAGTGAAGCCCCTCGTCACGTGAAATCAGCTCGTTGGAAA 57943 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || | ||| ||||| || |||||||| | ||| || || ||| ||| ||| | Sbjct 57942 ACGTGAGCCCCGGCATGAGACCGCGTTTCTTCAGCCAGAAAATGGCGCAGAAGCTCCCGG 57883 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || || || || | || || |||| | || || ||| | | || Sbjct 57882 AGAAGAAGATCCCTTCCACACAGGCGAAAGCGACGAGACGCTCCGCGAAGGAGTCGGTGG 57823 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 || ||| |||||||| | ||||||||||||| | ||| | ||| || ||||| | Sbjct 57822 CGT--CGA-TCCATTTCAACGCCCACTCGGCTTTCTTCTTGACGCAGGGGATGGTTTCCA 57766 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255 ||| || | || |||||| ||| | || || || || | || |||| Sbjct 57765 CGGCGCGGAAGAGGTTGGATTTTTCAGCGGAGTCCTTGATGTAGGTTTCTAACAGGAGGC 57706 Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315 ||||||| |||||||| |||||||| || || ||||| || | ||| ||| || || | Sbjct 57705 TGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTGGAAGCTGTAGAAGGCGCGTGCCT 57646 Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375 | || ||| |||||| ||| | | | || ||||||||| || || |||||| Sbjct 57645 CGGCGGATTGGACTTCCTTCATGAACCTTCCGGCGAGATTTTCGAGGACTATCCCGTCGG 57586 Query 17376 TCGCGGCGAAAAACGC 17391 |||||||| || || Sbjct 57585 AGGCGGCGAAGAAGGC 57570 >seq36964 Length=242943 Score = 127 bits (140), Expect = 2e-24 Identities = 291/436 (67%), Gaps = 3/436 (1%) Strand=Plus/Minus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| || || ||||||||||| || | |||||||| | || || ||||| |||| Sbjct 59785 ACAACAAGCACGCGAAATCGCAGTGAAGCCCCTCGTCACGTGAAATCAGCTCGTTGGAAA 59726 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | || | ||| ||||| || |||||||| | ||| || || ||| ||| ||| | Sbjct 59725 ACGTGAGCCCCGGCATGAGACCGCGTTTCTTCAGCCAGAAAATGGCGCAGAAGCTCCCGG 59666 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || || || || | || || |||| | || || ||| | | || Sbjct 59665 AGAAGAAGATCCCTTCCACACAGGCGAAAGCGACGAGACGCTCCGCGAAGGAGTCGGTGG 59606 Query 17136 TGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTA 17195 || ||| |||||||| | ||||||||||||| | ||| | ||| || ||||| | Sbjct 59605 CGT--CGA-TCCATTTCAACGCCCACTCGGCTTTCTTCTTGACGCAGGGGATGGTTTCCA 59549 Query 17196 TGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGC 17255 ||| || | || |||||| ||| | || || || || | || |||| Sbjct 59548 CGGCGCGGAAGAGGTTGGATTTTTCAGCGGAGTCCTTGATGTAGGTTTCTAACAGGAGGC 59489 Query 17256 TGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTT 17315 ||||||| |||||||| |||||||| || || ||||| || | ||| ||| || || | Sbjct 59488 TGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTGGAAGCTGTAGAAGGCGCGTGCCT 59429 Query 17316 CCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGC 17375 | || ||| |||||| ||| | | | || ||||||||| || || |||||| Sbjct 59428 CGGCGGATTGGACTTCCTTCATGAACCTTCCGGCGAGATTTTCGAGGACTATCCCGTCGG 59369 Query 17376 TCGCGGCGAAAAACGC 17391 |||||||| || || Sbjct 59368 AGGCGGCGAAGAAGGC 59353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517257948155520