Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq32367 156 4e-33 >seq32367 Length=12065 Score = 156 bits (172), Expect = 4e-33 Identities = 265/379 (70%), Gaps = 4/379 (1%) Strand=Plus/Plus Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 |||| ||||||||||||||||| || || || ||||| | | ||| || |||||||| | Sbjct 2391 ACATCAGACACGCGAAGTCGCAGTGGAGCCCCTCGTCACGGGAGATCAGCTCGTTGGAGA 2450 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCA-AATGACCCC 16312 | |||| ||| ||||| || || ||||| | |||||| || || ||| || ||| Sbjct 2451 ATGTTAGCCCCGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGGC-GCAGAAGCTCCCG 2509 Query 16313 GAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCT 16372 || ||||| || || || ||| | || || |||| | ||||||||| | || |||| Sbjct 2510 GAGAAGAAGATTCCTTCCACACACGCGAACGCGACAAGCCGTTCCGCGAAGAAAGTATCT 2569 Query 16373 TTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCT 16432 | | ||||||||| | |||| |||||||| | ||| ||| | ||||| Sbjct 2570 GTCGAGTGGATCCATTTCAGGGCCCACTCGGCTTTCTTCCTTACGCAAGGAACAGTTTCG 2629 Query 16433 ATGGCCTTAAACAAT-TTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 || || || | | | ||||| | | | | || | || || || || | || || Sbjct 2630 ATTGCACGGAAGAGTCTGCTCTTCTCCGCGGA-GTCCTTAATGTAGGTTTCTAAGAGCAA 2688 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 |||||||||||| ||||| |||||||| ||||| ||||| ||||| |||||| || || Sbjct 2689 ACTGTACATTTCCGAGTGGATGTTCTCAATGGCGATCTGGAATCCGTAGAAGGCGCGGGC 2748 Query 16552 CTCCGCTATTTGTACTTCC 16570 ||| || ||| ||||| Sbjct 2749 CTCAGCGGATTGGCCTTCC 2767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511130155876480