Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_001901.1 Length=46375 Score E Sequences producing significant alignments: (Bits) Value seq11259 2700 0.0 >seq11259 Length=3298 Score = 2700 bits (2994), Expect = 0.0 Identities = 2587/3301 (78%), Gaps = 18/3301 (1%) Strand=Plus/Minus Query 1014 TTTACCAATGGCCGTGGATTTTGGTGCCTGGGCGGTAAGGCTGCAAAAAACTATCGTGAA 1073 ||| | ||||| ||||| || ||||||||||||||||| || ||||||||||| |||||| Sbjct 3297 TTTCCTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGGCAAAAAACTACCGTGAA 3238 Query 1074 AAATCAGTAGATGTAGTTGGTTACGATGAACTGGCGGCGTTTGACGCAGACATTGAGAAA 1133 || || || ||||| | ||||| |||||||| || || ||||| | || ||||| | Sbjct 3237 AAGTCGGTGGATGTGGCGGGTTATGATGAACTTGCTGCTTTTGATGATGATATTGAACAG 3178 Query 1134 GAGGGTTCGCCGACCTTCCTGGGGGATAAGCGTATCGAGGGCTCTGTTTGGCCCAAATCC 1193 || || || ||||| |||||||| || |||||||| || ||||| || ||||| || ||| Sbjct 3177 GAAGGCTCTCCGACGTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCC 3118 Query 1194 ATACGCGGTTCGACACCGAAATTGCGTGGAACGTGTCAGATTGAGCGAGCAGCAAAAGAG 1253 || || || || || || ||| || | || || |||||||||||||| ||||| | || Sbjct 3117 ATCCGTGGCTCCACGCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAA 3058 Query 1254 TCCGGGCATTTTATGCGATTTCATGTCGCATGCCCGCATTGTGGTGAAGAGCAATATCTT 1313 ||| |||||||||||| |||||||| || ||||||||||| || || ||||| |||||| Sbjct 3057 TCCCCGCATTTTATGCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTT 2998 Query 1314 AAATTTGGTGACCGGGATACGCCTTTTGGCTTCAAATGGGAGCCTGAGCAGGCCGAAACG 1373 |||||||| ||| || ||||| |||||| |||||||| ||| || | || | Sbjct 2997 AAATTTGGCGACAAAGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGC 2938 Query 1374 GTCTACTACCTCTGCGAGCATAATGCTTGTGTCATTAAGCAACATGAACTGGACTTTTCC 1433 | | || | ||||||||||||||| || ||||| || || || ||||||||| | Sbjct 2937 GCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACT 2878 Query 1434 AACGCTCGTTATATTTGCGAATTGACCGGAATATGGACGCGAGACGGGCTTCGCTGGTTC 1493 | || |||||||| |||||| |||||| || ||||| || || || ||| |||||| Sbjct 2877 GATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGGCATTCTCTGGTTT 2818 Query 1494 TCATCGTCTAATGCTGAAATTGACCCGCCTGAAAGCGTAACTTTCCACATCTGGACTGCT 1553 || || || || || ||||| || ||||| || || || || ||||||||||| || Sbjct 2817 TCGTCATCCGGTGAAGAGATTGAGCCACCTGACAGTGTGACCTTTCACATCTGGACAGCG 2758 Query 1554 TATAGCCCGTTTACCACCTGGGTACAGATTGTTAAAGACTGGTTCAAAACGAAAGGCGAC 1613 || |||||||| ||||||||||| |||||||| ||||||||| | |||||||| || || Sbjct 2757 TACAGCCCGTTCACCACCTGGGTGCAGATTGTCAAAGACTGGATGAAAACGAAGGG-GAT 2699 Query 1614 ACGGGTAAACGCAAAACATTCGTGAACACCACCTTGGGTGAGACGTGGGAAGCGAAAATC 1673 ||||| ||||| ||||| ||||| |||||||| | |||||||||||||| |||||||| Sbjct 2698 ACGGGAAAACGTAAAACCTTCGTAAACACCACGCTCGGTGAGACGTGGGAGGCGAAAATT 2639 Query 1674 GGTGATCGGCCCGATGCGGACGTGTTAGCTGAGCGTAAAGAGCACTTTGATGCTGCAGTG 1733 || || || || ||||| || ||| | || ||||| |||||||| | | || | | | Sbjct 2638 GGCGAACGTCCGGATGCTGAAGTGATGGCAGAGCGGAAAGAGCATTATTCAGCGGGGGGG 2579 Query 1734 CCTGAGCGAGTGGCGTATCTGACAGCTGGTATTGACTCCCAGCTCGACCGTTACGAAATG 1793 ||||| || ||||| || ||||| || ||||| ||||||||||| ||||| ||||||||| Sbjct 2578 CCTGACCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAGCTGGACCGCTACGAAATG 2519 Query 1794 CGTGTATGGGGATGGGGGCCGGGAGAGGAAAGCTGGCTTATCGACCGGCAAATCATCATG 1853 || |||||||||||||||||||| |||||||||||||| || |||||||| || || ||| Sbjct 2518 CGCGTATGGGGATGGGGGCCGGGTGAGGAAAGCTGGCTGATTGACCGGCAGATTATTATG 2459 Query 1854 GGTCGTCATGATGATGAGTCTACGCTTGCT-CGCGTGGATGAGGCGATTAACAAGACATA 1912 || || || || ||||| ||||| ||| || ||||||||||| || || || || || Sbjct 2458 GGCCGCCACGACGATGAACAGACGCT-GCTGCGTGTGGATGAGGCCATCAATAAAACCTA 2400 Query 1913 CACGCGCCGGAACGGTGTTGAAATGTCTATCTCCCGTATTTGCTGGGACATCGGTGGCAT 1972 || |||||||| |||| ||||||| | ||||||| |||||||| | || || || Sbjct 2399 TACCCGCCGGAATGGTGCAGAAATGTGGAGGGCCCGTATCTGCTGGGATACTGGCGGGAT 2340 Query 1973 TGATCCCACTATCGTCTACAACCGCTCTAAAAAACACGGTCTGTTTCGTGTGATCCCGAT 2032 ||| || || || || || | ||||| |||||||| || ||||| || |||||||| || Sbjct 2339 TGACCCGACCATTGTGTATGAACGCTCGAAAAAACATGGGCTGTTCCGGGTGATCCCCAT 2280 Query 2033 TAAGGGTGCCTCGGTTTATGGAAAACCGGTAGCGAATATGCCCCGCAAGCGTAACAAAAA 2092 ||| || || || || || ||||| ||||| || | ||||| || ||||| |||||||| Sbjct 2279 TAAAGGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCACGTAAGCGAAACAAAAA 2220 Query 2093 CGGTGTTTATCTGACTGAGGTGGGTACTGATACCGCTAAAGAGCAGATTTATAACCGCTT 2152 ||| ||||| || || || | ||||| |||||||| ||||||||||||||||||||||| Sbjct 2219 CGGGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTT 2160 Query 2153 CACGCTGATTGTCGAGGGAGATGAACCTCTGGCCGGTGCCGTTCACTTCCCCAACAACCC 2212 ||| |||| || || |||||||| || ||||||||||||||||||| || ||||| Sbjct 2159 CACACTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCC 2100 Query 2213 CGATATTTACGATCTTTCTGAGGCGCAGCAGCTGACCGCCGAAGAGCTGGTAGAAAAGTG 2272 ||||||| ||||| | || |||||||||||||| || ||||||| ||| ||||| || Sbjct 2099 GGATATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATG 2040 Query 2273 GGTTGATGGGAAGAGAAAAATCATATGGGACAGCAAAAAGAGGCGAAATGAGGCTCTCGA 2332 ||| ||||| | || |||||| | ||||||||||||||| | || |||||||| ||||| Sbjct 2039 GGTGGATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGA 1980 Query 2333 CTGCTTTGTTTACGCACTGGCGGCGCTTCGTATCAGCATATCCCGCTGGCAGCTTAACCT 2392 |||||| ||||| || ||||||||||| || ||||| || |||||||||||||| | || Sbjct 1979 CTGCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCT 1920 Query 2393 TGATTCACTTCTGGCCAGCCTGCTGGAGGAAGAGGGCACCCGTAACAATAACAAGACCCT 2452 | | || ||||| ||||||| ||| || || || | | ||| || || || || Sbjct 1919 CAGTGCGCTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAACCAACAAGAAAACACT 1860 Query 2453 GGCGGATTACGCGCGGGCATTATCTGGAGAGGAATAATGGCAACACAGACTGAACTGGAT 2512 ||| |||||||| || || ||||| |||||||| |||| | |||| ||||| | Sbjct 1859 GGCAGATTACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCGACAGGAAGAACTTGCC 1800 Query 2513 GCCGCGCGCGCTGCGTTACATGACCTGATGATGGGGAAACGTGTGGCGACAGTACAAAAA 2572 || || || || || | ||||||||||||| || ||||| ||||| |||||||| ||| Sbjct 1799 GCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACAGTACAGAAA 1740 Query 2573 GACGGTCGAAGAGTGGAATTTACAGCTACCTCAGTCAGCGATCTGAAAAAGTATATCGCC 2632 ||||| ||||| ||||| ||||| || || || || || |||||||| ||||| || Sbjct 1739 GACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAATATATTGCA 1680 Query 2633 GACCTTGAATCACAGGTCGGAACCACATCACGACGCCGGGGGCCTGCTGGGTTTTACGTA 2692 || || ||| ||| ||| | ||| |||||| |||| ||||| || ||||| ||| Sbjct 1679 GAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGATTTTATGTA 1620 Query 2693 TGAAAAT----ACCAT-----CTTTAGTGGGACCTGACGGGAAAACATCCCTTCGGGAAT 2743 |||||| ||||| | | |||| || ||||| | ||||| || || |||| Sbjct 1619 TGAAAACGCCCACCATTCCCACCCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAAT 1560 Query 2744 ACGCGGGATATCATGGAGGTGGTGGCGGGTTTGGTGGTCAGCTGCGAGGCTGGAATCCGC 2803 | || || ||||| || ||||| |||| ||||| || ||| |||| ||||| || | Sbjct 1559 ATGCCGGTTATCACGGCGGTGGCAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCAC 1500 Query 2804 CGAGCGAAAGTGCAGATGCAGCACTCCTTCCCAACTATTCTCGTGGAAATGCCCGCGCTG 2863 |||| ||||||| |||||||| || | ||||||| | | ||||| ||||||||||| | Sbjct 1499 CGAGTGAAAGTGTGGATGCAGCCCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAG 1440 Query 2864 ACGATCTGGTGCGAAATAATGGCTATGCGGCAAATGCCGTGCAGCTCCACCAGGACCACA 2923 |||||||||| || ||||| |||||||| || || ||| | ||||| || ||||| || | Sbjct 1439 ACGATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAGCTGCATCAGGATCATA 1380 Query 2924 TCGTCGGGTCATTTTTCAGACTCAGTTATCGACCAAGCTGGCGTTATCTGGGTATTAATG 2983 |||||||||| |||||| | |||||| |||| ||||||||||| |||||||| || | Sbjct 1379 TCGTCGGGTCTTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGCTATCTGGGCATCGGGG 1320 Query 2984 AGGAAGATTCACGCGCATTTTCGCGGGATGTGGAAGCTGCATGGAATGAGTATGCCGAGG 3043 ||||||| | || || ||||| || || || ||||| |||||||| |||| |||||||| Sbjct 1319 AGGAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGGAAAGAGTTTGCCGAGG 1260 Query 3044 ATGACTTTTGCGGGATTGATGCCGAACGTAAGCGCACGTTTACGATGATGATCCGCGAAG 3103 |||||| ||| | ||||| | || || || ||||||||||| |||||||| || |||| Sbjct 1259 ATGACTGCTGCTGCATTGACGTTGAGCGAAAACGCACGTTTACCATGATGATTCGGGAAG 1200 Query 3104 GTGTGGCCATGCATGCGTTTAACGGTGAATTATGCGTGCAGGCGACCTGGGACAGCGATT 3163 ||||||||||||| || |||||||||||| | | ||| ||||| |||||||| | | || Sbjct 1199 GTGTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACCTGGGATACCAGTT 1140 Query 3164 CAACGCGTCTTTTCCGCACCCAGTTCAAAATGGTCAGTCCGAAGCGCGTCAGCAACCCGA 3223 | |||| |||||||| || |||||| |||||||| ||||||||| |||||||||||| Sbjct 1139 CGTCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAGCGCATCAGCAACCCGA 1080 Query 3224 ACAATATCGGTGATACCCGGAACTGTCGTGCCGGTGTAAAAATCAATGATAGCGGTGCTG 3283 |||||| ||| || | ||||||||| ||||||||||| | || ||||| |||||||| | Sbjct 1079 ACAATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGTGCGG 1020 Query 3284 CGCTGGGATATTACGTCAGCGACGATGGCTATCCCGGCTGGATGGCGCAAAACTGGACCT 3343 |||||||||||||||||||||| || || ||||| ||||||||| |||| || ||||| | Sbjct 1019 CGCTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATGCCGCAGAAATGGACAT 960 Query 3344 ACATCCCTCGCGAACTACCCGGCGGTCGACCTTCGTTTATCCATGTATTCGAACCGATGG 3403 || || || || |||||||||| || | ||||| || || || || ||||| ||| Sbjct 959 GGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGTTTTTGAACCCGTGG 900 Query 3404 AGGATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAAATGC 3463 |||| || ||||| || || || |||| ||||||||||||||||||||||||||| |||| Sbjct 899 AGGACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAGATGC 840 Query 3464 TCGACACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCGGCTA 3523 ||||||| ||||| || || ||||| |||||||| || |||||||| |||||||| || | Sbjct 839 TCGACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAGGCGATGTATGCCGCCA 780 Query 3524 CCATCGAGAGTGAGCTGGATACCCAATCGGCGATGGACTTTATTCTCGGTGCAGATAATA 3583 |||| ||||||||||||||||| || || |||||||| |||||||| || || | | | Sbjct 779 CCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAACAGTC 720 Query 3584 AAGAGCAGCAGAGCAAACTGACGGGCTGGCTCGGCGAAATGGCAGCCTATTACTCTGCTG 3643 | ||||||| | | ||||| |||||| | || ||||| || || |||||| | || | Sbjct 719 AGGAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCCGCAG 660 Query 3644 CGCCGGTTCGCCTTGGCGGGGCAAGGGTCCCACACCTGTTGCCAGGGGATTCTCTTAACC 3703 ||||||| || || || || |||| || || |||||| |||| || || || || |||| Sbjct 659 CGCCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCGGGTGACTCACTGAACC 600 Query 3704 TTCAGTCGGCGCAGGATACCGATAACGGCTATTCAACGTTCGAACAATCCCTGCTGCGTT 3763 | ||| |||| |||||||| ||||||||||| || ||| || || || |||||||| | Sbjct 599 TGCAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTGCGGT 540 Query 3764 ATATTGCTGCAGGGCTGGGTGTGTCGTATGAGCAGCTTTCACGAAATTATTCGCAGATGA 3823 |||| ||||| ||||||||||| ||||||||||||||||| || ||||| | ||||||| Sbjct 539 ATATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGGAATTACGCCCAGATGA 480 Query 3824 GCTACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGTCGAA 3883 ||||||| || ||||| || ||||| |||||||| |||||||||||||||||||| |||| Sbjct 479 GCTACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGGCGAA 420 Query 3884 AGTTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCGATTG 3943 | || || |||||||| ||||| | ||||||||||| |||||||| |||||||| || | Sbjct 419 AATTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCCATCG 360 Query 3944 TCCGCCGCGTGGTCACGCTTCCTTCGAAAGCCAGGTTCAGTTTCCAGGAGGCGAGAACAG 4003 | ||||||||||| ||| | ||||| ||||| | |||||||| ||||| || | | | Sbjct 359 TTCGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTTCAGGAAGCCCGCAGTG 300 Query 4004 CCTGGGGGAATGCCAACTGGATTGGTTCTGGTCGAATGGCAATTGACGGTCTGAAAGAGG 4063 |||||||||| | ||||||| || || ||||| ||||| || || ||||||||||| | Sbjct 299 CCTGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATCGATGGTCTGAAAGAAG 240 Query 4064 TGCAGGAAGCCGTCATGCTAATCGAAGCAGGTCTCAGTACGTATGAGAAAGAGTGCGCCA 4123 | |||||||| || ||||| || ||||| || || ||||| || |||||||||||||| | Sbjct 239 TTCAGGAAGCGGTGATGCTGATAGAAGCCGGACTGAGTACCTACGAGAAAGAGTGCGCAA 180 Query 4124 AACGCGGTGATGATTATCAGGAGATTTTTGCCCAGCAGGTCCGGGAATCAATGGAGCGTC 4183 |||||||||| || |||||||| |||||||||||||||||||| ||| | |||||||| | Sbjct 179 AACGCGGTGACGACTATCAGGAAATTTTTGCCCAGCAGGTCCGTGAAACGATGGAGCGCC 120 Query 4184 GTGCTGCGGGTCTGAACCCACCGGCATGGGCCGCTGCCGCTTTTGAGGCTGGAGTGAAAA 4243 |||| || ||||| || || || || ||||| ||||| || ||||| | || || | Sbjct 119 GTGCAGCCGGTCTTAAACCGCCCGCCTGGGCGGCTGCAGCATTTGAATCCGGGCTGCGAC 60 Query 4244 AATCAAACGAGGAGGAGCAAGA-TGGC-GCACGAGCTGCGTAATCTTCCGCATATTGCCA 4301 |||||| ||||||||| |||| || | ||| ||||||||| |||| ||||||| ||||| Sbjct 59 AATCAACAGAGGAGGAG-AAGAGTGACAGCA-GAGCTGCGT-ATCTCCCGCATA-TGCCA 4 Query 4302 G 4302 | Sbjct 3 G 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148200107522016