Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq41040 95.1 9e-15 >seq41040 Length=490441 Score = 95.1 bits (104), Expect = 9e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 || |||| ||| || || || ||||| |||||||||||||||||| ||| | | |||| Sbjct 167770 AGCACCAAGTGTAGGGTGGACTCTTTCCGAATGTTGTAGTCGGCCAAGGTTCTGCCATCT 167829 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | ||||| || ||| |||| || || ||||| || || | ||| || || || Sbjct 167830 TCAAGCTGTTTACCAGCAAAGATGAGCCTCTGTTGGTCTGGTGGGATGCCCTCTTTGTCT 167889 Query 18234 GCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTT 18293 ||||| ||| || | ||| |||||| | ||| |||| ||||||| | Sbjct 167890 TGAATTTTGGCCTTCACATTGTCAATTGTGTCAGAGCTCTCCACCTCAAGGGTGATGGTC 167949 Query 18294 TTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || || | || || |||||||||||||| Sbjct 167950 TTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 167981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379138431589680