Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq41918 82.4 7e-11 >seq41918 Length=7750 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || ||||||||||| |||||||| ||||||||| || || || ||||| ||||| | Sbjct 4014 CAAGCAAAATCACAGTGAAGGCCTTCATCTCTAGAGATTAGCTCATTTGAGAATGTGAGA 3955 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATAT 13754 || ||||||||||||| ||| || | ||| || || Sbjct 3954 CCAGGCATCAATCCTCTTTTCTTAAGCCAGAAAAT 3920 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478322800344960