Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq32367 113 7e-20 >seq32367 Length=12065 Score = 113 bits (124), Expect = 7e-20 Identities = 235/342 (69%), Gaps = 6/342 (2%) Strand=Plus/Minus Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 ||| ||||||||||| ||| ||||||||| | ||||||||||||||| | || | Sbjct 2740 CTTCTACGGATTCCAGATCGCCATTGAGAACATCCACTCGGAAATGTACAGTTTGCTCTT 2681 Query 125294 TGACATGTACATTCGCGA-TCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGG 125352 || | |||||| || ||||| | | | || ||||| |||||||| || | Sbjct 2680 AGAAACCTACATTAAGGACTCCGCGGAGAAGAG-CAGACTCTTCCGTGCAATCGAAACTG 2622 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CT 125411 | || | || | || || || | |||| | |||||| | ||||| | || Sbjct 2621 TTCCTTGCGTAAGGAAGAAAGCCGAGTGGGCCCTGAAATGGATCCACT-CGACAGATACT 2563 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGT 125471 | | ||| || | || || || ||||| || || || |||||||| || || || Sbjct 2562 TTCTTCGCGGAACGGCTTGTCGCGTTCGCGTGTGTGGAAGGAATCTTCTTCTCCGGGAGC 2503 Query 125472 TT-TGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 || |||| ||||||| ||||| ||||||||||| |||||||| || || || | || Sbjct 2502 TTCTGCG-CCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCGGGGCTAACATTCTCCAA 2444 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 |||| | || || || |||||||| || ||||| ||||| || Sbjct 2443 CGAGCTGATCTCCCGTGACGAGGGGCTCCACTGCGACTTCGC 2402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740647319296640