Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq39612 127 4e-24 seq41339 91.5 3e-13 seq40535 91.5 3e-13 seq39734 91.5 3e-13 seq41129 89.7 1e-12 seq1793 89.7 1e-12 seq40574 87.8 4e-12 seq38955 87.8 4e-12 seq38607 87.8 4e-12 seq37113 87.8 4e-12 seq29281 87.8 4e-12 seq15701 87.8 4e-12 seq8360 87.8 4e-12 seq43476 86.0 1e-11 seq41338 86.0 1e-11 seq38597 86.0 1e-11 seq36501 86.0 1e-11 seq6720 86.0 1e-11 seq40392 84.2 4e-11 >seq39612 Length=49512 Score = 127 bits (140), Expect = 4e-24 Identities = 199/282 (71%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 218528 ACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCCAGCGTGGTGG 218587 |||| || || || | ||||| || |||| | | | || |||||| ||||| | Sbjct 24790 ACAAAGAACTTATATTGTTCTCTAGGGCTGATCTTCAAAGGTCCATTCCCTCGGTGGTTG 24849 Query 218588 ATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTTC 218647 |||||||||| ||| || | ||||| || || | |||| ||| || | |||| Sbjct 24850 ATGGCCTCAAACCAGGTCAAAGGAAGATTCTTTTCTGCTCATTTAAG-AAAAAGTTGTTC 24908 Query 218648 AA-GAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCAC 218706 || ||||| || || | || ||| ||||||||| |||||| |||| ||||| || Sbjct 24909 AAGGAAATAAAAGTAGGCCAATTTATTGGTTATGTGTCCGAACACTCTGCTTACCACCAT 24968 Query 218707 GGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAAC 218766 ||||| || |||||| | | || |||| ||||||||||||| ||| || || ||| Sbjct 24969 GGTGAACAAAGTCTGGCTAGCACAATCATAGGAATGGCACAGGACTTTGTTGGTAGCAAC 25028 Query 218767 AACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808 ||||| || ||||| || |||||||| |||||| ||||| Sbjct 25029 AACATTAATCTGCTGAAACCAAACGGTCAATTTGGTACTCGT 25070 >seq41339 Length=137894 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 130232 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 130173 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 130172 AGCCCCAC 130165 >seq40535 Length=90514 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 69233 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 69292 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 69293 AGCCCCAC 69300 >seq39734 Length=90514 Score = 91.5 bits (100), Expect = 3e-13 Identities = 61/68 (90%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560 |||||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||| Sbjct 21282 ATAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 21223 Query 142561 AGCCCCAC 142568 |||||||| Sbjct 21222 AGCCCCAC 21215 >seq41129 Length=29110 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 7699 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 7758 Query 142562 GCCCCAC 142568 ||||||| Sbjct 7759 GCCCCAC 7765 >seq1793 Length=8354 Score = 89.7 bits (98), Expect = 1e-12 Identities = 60/67 (90%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 ||||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||| Sbjct 4176 TAGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 4117 Query 142562 GCCCCAC 142568 ||||||| Sbjct 4116 GCCCCAC 4110 >seq40574 Length=65990 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 58842 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 58901 Query 142563 CCCCAC 142568 |||||| Sbjct 58902 CCCCAC 58907 >seq38955 Length=11493 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 11093 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 11034 Query 142563 CCCCAC 142568 |||||| Sbjct 11033 CCCCAC 11028 >seq38607 Length=755539 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 506837 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 506778 Query 142563 CCCCAC 142568 |||||| Sbjct 506777 CCCCAC 506772 >seq37113 Length=107774 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 100844 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 100785 Query 142563 CCCCAC 142568 |||||| Sbjct 100784 CCCCAC 100779 >seq29281 Length=14704 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 10990 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 10931 Query 142563 CCCCAC 142568 |||||| Sbjct 10930 CCCCAC 10925 >seq15701 Length=20536 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 16369 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 16428 Query 142563 CCCCAC 142568 |||||| Sbjct 16429 CCCCAC 16434 >seq8360 Length=5022 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 2465 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2524 Query 142563 CCCCAC 142568 |||||| Sbjct 2525 CCCCAC 2530 >seq43476 Length=14712 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 13630 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 13571 Query 142564 CCCAC 142568 ||||| Sbjct 13570 CCCAC 13566 >seq41338 Length=99585 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 83390 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 83331 Query 142564 CCCAC 142568 ||||| Sbjct 83330 CCCAC 83326 >seq38597 Length=103227 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 83157 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 83098 Query 142564 CCCAC 142568 ||||| Sbjct 83097 CCCAC 83093 >seq36501 Length=230867 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||| ||||||||| |||||||||| || ||||||| || |||||||||||||||||| Sbjct 112301 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 112242 Query 142564 CCCAC 142568 ||||| Sbjct 112241 CCCAC 112237 >seq6720 Length=31440 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||| ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 14533 AGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 14474 Query 142563 CCCCA 142567 ||||| Sbjct 14473 CCCCA 14469 >seq40392 Length=102912 Score = 84.2 bits (92), Expect = 4e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||| || ||||||||| |||||||||| || ||||||| || ||||||||||||||||| Sbjct 59342 AGCTCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 59401 Query 142563 CCCCAC 142568 |||||| Sbjct 59402 CCCCAC 59407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027251246514224