Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq32508 102 1e-16 seq32367 96.9 6e-15 >seq32508 Length=19167 Score = 102 bits (112), Expect = 1e-16 Identities = 172/246 (70%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 ||| ||||||||| ||||||||||| || ||||| || | |||||| |||||| || Sbjct 4061 ACAAGAGGCACGCGAAGTCGCAGTGGAGGCCCTCATCACACAAGATGAGCTCGTTAGAGT 4120 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCG 160033 ||| | |||||||| || ||| |||||| | | || | |||| |||| ||| Sbjct 4121 AAGTGATCCTCGGCATGAGGCCGCGCTTCTTGAGCTAGTAGATAG-CGCAGAAGCTACCA 4179 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTG 160093 || |||||||| |||| | ||||||||| |||| | || |||| || || | Sbjct 4180 GAGAAGAAGATCCCTTCCATGCACGCAAACGCGACGAAGCATTCTGCAAAGGAATCGGAG 4239 Query 160094 GTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCG 160153 | | | | |||| | ||||| || |||||||| |||| ||| || ||| |||| Sbjct 4240 GAG---TTGATCCATTTCAGCGCCCACTCTGCCTTCTTGGCGACGCAGGGGATGGTCTCG 4296 Query 160154 ACGGCG 160159 |||||| Sbjct 4297 ACGGCG 4302 >seq32367 Length=12065 Score = 96.9 bits (106), Expect = 6e-15 Identities = 116/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Plus Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATG 159979 || ||||| ||||||||||| || |||||||| || ||||| | ||||||||| | | Sbjct 2396 AGACACGCGAAGTCGCAGTGGAGCCCCTCGTCACGGGAGATCAGCTCGTTGGAGAATGTT 2455 Query 159980 AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGC-ACCGCTAAA 160038 || |||||||||| || ||| || ||||| || |||| |||| |||| ||| || Sbjct 2456 AGCCCCGGCATGAGGCCGCGCTTCTTCAGCCAGAAGATGG-CGCAGAAGCTCCCGGAGAA 2514 Query 160039 AAAGATCCCCTCCACGGCCGCAAACGCCACGAGCC 160073 ||||| || ||||| ||| ||||| || |||| Sbjct 2515 GAAGATTCCTTCCACACACGCGAACGCGACAAGCC 2549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794713252739840