Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq32367 150 2e-31 seq42527 134 2e-26 seq36964 134 2e-26 seq37024 125 9e-24 seq1704 125 9e-24 seq32508 122 1e-22 seq40957 111 2e-19 seq44058 105 8e-18 seq37232 96.9 4e-15 seq36378 93.3 5e-14 >seq32367 Length=12065 Score = 150 bits (166), Expect = 2e-31 Identities = 207/284 (73%), Gaps = 4/284 (1%) Strand=Plus/Minus Query 102039 TACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAG-CTCTTTGA 102097 |||||| ||| |||| | || |||||||| || ||||||| |||| ||||| Sbjct 2694 TACAGTTTGCTCTTAGAAACCTACATTAAGGACTCCGCGGAGAAGA-GCAGACTCTTCCG 2636 Query 102098 AGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGA 102157 || ||| |||| ||||| || | |||||||| || ||||| |||| ||| | | Sbjct 2635 TGCAATCGAAACTGTTCCTTGCGTAAGGAAGAAAGCCGAGTGGGCCCTGAAATGGATCCA 2576 Query 102158 TACAA-AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 102216 | | || | ||| || || || || || |||| || |||||||| || || |||| Sbjct 2575 CTCGACAGATACTTTC-TTCGCGGAACGGCTTGTCGCGTTCGCGTGTGTGGAAGGAATCT 2517 Query 102217 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 102276 ||||||| || ||||||||| || | ||||| |||||||| || |||||||| || | Sbjct 2516 TCTTCTCCGGGAGCTTCTGCGCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCGGGGC 2457 Query 102277 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 | |||||||||||||| ||||| ||||||||||| |||||| Sbjct 2456 TAACATTCTCCAACGAGCTGATCTCCCGTGACGAGGGGCTCCAC 2413 >seq42527 Length=94160 Score = 134 bits (148), Expect = 2e-26 Identities = 152/200 (76%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTG 102180 |||| |||||||| || ||||| |||| ||| | || | | || | |||| || | Sbjct 57784 TCAAGAAGAAAGCCGAGTGGGCGTTGAAATGGATCGACGCCAC--CGACT-CCTTCGCGG 57840 Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240 |||| ||| |||| || || ||||| || || ||||||||||| || ||||||||| | Sbjct 57841 AGCGTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCCA 57900 Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300 ||| ||||| ||||| || ||||||||||| || ||| || ||||||||||| || | Sbjct 57901 TTTTCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAGCTGATTT 57960 Query 102301 CTCGTGACGAGGGACTCCAC 102320 | ||||||||||| || ||| Sbjct 57961 CACGTGACGAGGGGCTTCAC 57980 >seq36964 Length=242943 Score = 134 bits (148), Expect = 2e-26 Identities = 152/200 (76%), Gaps = 4/200 (2%) Strand=Plus/Plus Query 102122 TCAA-AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTG 102180 |||| |||||||| || ||||| |||| ||| | || | | || | |||| || | Sbjct 59567 TCAAGAAGAAAGCCGAGTGGGCGTTGAAATGGATCGACGCCAC--CGACT-CCTTCGCGG 59623 Query 102181 AGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTA 102240 |||| ||| |||| || || ||||| || || ||||||||||| || ||||||||| | Sbjct 59624 AGCGTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCCA 59683 Query 102241 TTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCT 102300 ||| ||||| ||||| || ||||||||||| || ||| || ||||||||||| || | Sbjct 59684 TTTTCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAGCTGATTT 59743 Query 102301 CTCGTGACGAGGGACTCCAC 102320 | ||||||||||| || ||| Sbjct 59744 CACGTGACGAGGGGCTTCAC 59763 >seq37024 Length=156878 Score = 125 bits (138), Expect = 9e-24 Identities = 145/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 102185 |||||||| || ||||| ||||| ||| | || || ||| |||||| || ||||| Sbjct 92 AAGAAAGCCGAGTGGGCGATGAAATGGATCGACGCA---TCGGATTCCTTCGCGGAGCGG 148 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 | | || || || || || || || ||||||||||| || ||||||||| || | Sbjct 149 GTGGTTGCCTTCGCCTGCGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCGATCTTC 208 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||| | || || || ||||||||||| || ||| |||||||||||||| ||||| || Sbjct 209 TGGTTGAAAAAACGCGGTCTCATGCCGGGGCTCACGTTCTCCAACGAGCTGATCTCACGC 268 Query 102306 GACGAGGGACTCCAC 102320 |||||||| || ||| Sbjct 269 GACGAGGGGCTTCAC 283 >seq1704 Length=114806 Score = 125 bits (138), Expect = 9e-24 Identities = 145/195 (74%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 102185 |||||||| || ||||| ||||| ||| | || || ||| |||||| || ||||| Sbjct 97441 AAGAAAGCCGAGTGGGCGATGAAATGGATCGACGCA---TCGGATTCCTTCGCGGAGCGG 97497 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 | | || || || || || || || ||||||||||| || ||||||||| || | Sbjct 97498 GTGGTTGCCTTCGCCTGCGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCGATCTTC 97557 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGT 102305 ||| | || || || ||||||||||| || ||| |||||||||||||| ||||| || Sbjct 97558 TGGTTGAAAAAACGCGGTCTCATGCCGGGGCTCACGTTCTCCAACGAGCTGATCTCACGC 97617 Query 102306 GACGAGGGACTCCAC 102320 |||||||| || ||| Sbjct 97618 GACGAGGGGCTTCAC 97632 >seq32508 Length=19167 Score = 122 bits (134), Expect = 1e-22 Identities = 121/153 (79%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 102170 TTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTC 102229 ||||||||| || | || |||| |||||||| | || || ||||||||||||||| Sbjct 4233 TTCCTTTGCAGAATGCTTCGTCGCGTTTGCGTGCATGGAAGGGATCTTCTTCTCTGGTAG 4174 Query 102230 CTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCC-AGG-TCTCTGCTTCTCC 102287 |||||||||||| || | |||||||||||| || |||||||| ||| || || | ||| Sbjct 4173 CTTCTGCGCTATCTACTAGCTCAAGAAGCGCGGCCTCATGCCGAGGATCACT--TACTCT 4116 Query 102288 AACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||||| |||| |||| ||||| |||||| Sbjct 4115 AACGAGCTCATCTTGTGTGATGAGGGCCTCCAC 4083 >seq40957 Length=105852 Score = 111 bits (122), Expect = 2e-19 Identities = 180/256 (70%), Gaps = 10/256 (4%) Strand=Plus/Minus Query 15918 TCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAA 15977 ||||| || ||| | | || ||||| || | ||||| ||||| || | ||||| Sbjct 5477 TCAAGAATGTCAGCCCTGTTAGTTGCAGCAACGACAATGATACCGGTATTACCCTCAAAC 5418 Query 15978 CCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 16037 |||||||| ||||||||||| ||||| | || ||||| | |||||||||| || | Sbjct 5417 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CCA 5361 Query 16038 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCAT 16094 ||| |||| | | ||| | || || |||||||| ||||||| ||||| ||||| Sbjct 5360 CCAATTCCAGTCCCTCTTTGTCTCCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 5301 Query 16095 GGTTGATTTTCGCGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 16152 || ||| || || |||| || | ||| || || || ||||| ||||||| Sbjct 5300 GGGGCATTCTCTTTGGC--CTTCTTGAACAAATCACGGACTCGAGAAGCGCCAACACCAA 5243 Query 16153 CAAACATCTCCACAAA 16168 |||||||||| ||||| Sbjct 5242 CAAACATCTCAACAAA 5227 >seq44058 Length=119181 Score = 105 bits (116), Expect = 8e-18 Identities = 290/440 (66%), Gaps = 6/440 (1%) Strand=Plus/Minus Query 15936 TTCGTTGCGGCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAA 15995 || ||||| || | ||| | ||||| || | ||||| || ||||| ||||||| | Sbjct 58903 TTAGTTGCTGCAACGACTATGATACCAGTATTACCCTCAAACCCGTCCATTTCTGTCAGA 58844 Query 15996 AGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 16055 || ||||| | || ||||| | ||||||||| || | ||||||| | |||| Sbjct 58843 AGTTGGTTCAGGGTCTGTTCTCTTTCATCATTTCCTCCGCCAATTCCAGCACCTCTTTGC 58784 Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 |||| || |||||||| ||||||| || || ||||| || ||| || || || Sbjct 58783 CTTCCAACAGCATCAATTTCATCAACAAAAACAATGCAGGGAGCATTCTCTTTGGC--CT 58726 Query 16116 TCA--AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 16173 || || | ||| || || || || || | ||||||||||||||| ||||| | | Sbjct 58725 TCTTGAATAAATCACGAACTCGAGAAGCACCAATACCAACAAACATCTCAACAAACTCAG 58666 Query 16174 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 16232 | | | |||| || || |||||| | |||||| ||||| || ||| | || Sbjct 58665 AACCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCAGCAATAGCCTTGGCTAATAGC 58607 Query 16233 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTT 16292 ||||| || || ||||| ||| || || | ||| ||| || || ||| Sbjct 58606 GTCTTCCCAGTCCCTGGAGGACCAATAAGAAGAACTCCTTTTGGTATGCGAGCTCCAACA 58547 Query 16293 CCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCG 16352 || | | |||||||| | ||| ||||| ||||| | ||| || || | ||||| Sbjct 58546 GCAGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTCCATAAAATCCTGCTTGGCT 58487 Query 16353 GCGTCAATCCCCTCAACATC 16372 | || | ||| ||||||| Sbjct 58486 TCATCTACCCCGGCAACATC 58467 >seq37232 Length=10575 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || || || ||||||||||| || |||||| || |||| ||||| ||||| || ||| Sbjct 7028 GTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGTGCGATTTTCTGGCTGAAGAAACGCGGT 7087 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 |||||||| || ||| || ||||||||| | || || ||||||||||| || ||| Sbjct 7088 CTCATGCCGGGGCTCACGTTTTCCAACGAGTTGATTTCACGTGACGAGGGGCTTCACTGT 7147 Query 102324 GAGTTTGC 102331 || ||||| Sbjct 7148 GATTTTGC 7155 >seq36378 Length=63125 Score = 93.3 bits (102), Expect = 5e-14 Identities = 251/379 (66%), Gaps = 20/379 (5%) Strand=Plus/Minus Query 15974 AAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 16033 ||| ||||||||||||||||| ||||||||||| || || |||| ||||||||| | Sbjct 47858 AAAGCCATCCATCTCTGTCAAGAGCTGGTTAATTGTCTGCTCCCTCTCATCATTCCC--- 47802 Query 16034 CATACCACC-AGCACTG-----CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGAC 16087 |||||| ||| | | | ||| | || || |||||||||||||||||||| || Sbjct 47801 ---ACCACCGAGCCCCGCCCCTCTCTGCCTCCCAACAGCATCAATCTCATCAATGAACAC 47745 Query 16088 GATGCATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGC 16143 ||||| ||| |||| || || ||||| | ||||| ||| || | || | Sbjct 47744 AATGCACGGT--GCCTTCGATTTCGCCTTCTCAAACAAATCCC--TCACCCTGGACGCAC 47689 Query 16144 CCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAG 16203 | || || ||||| | |||||| || | | || | || || ||| || | Sbjct 47688 CAACCCCCACAAAGAGCTCCACGAACTCAGAAGCCGCGCACGAGAAGAACGGCGTGCCGG 47629 Query 16204 ATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGA 16263 |||||| || | |||| || ||||| ||||| || || || || || | || | Sbjct 47628 CTTCACCAGCCACCGCTCTCGCCAGAAGGGTCTTCCCTGTTCCCGGTGGCCCAACCAGAA 47569 Query 16264 GGGCACCTCGTGGAATCTTGGCGCCACTTCCAAAGTATCTCTCAGGTTGCTTAAGAAAAT 16323 | ||| ||||||||| || || || ||| | ||||| | ||| | |||| Sbjct 47568 GACACCCTTTTGGAATCTTCGCACCCAGCGCAGTGTACTTGTCAGGATTCTTCAAGAAAT 47509 Query 16324 CCACAATCTCTTCCAATTC 16342 | || | ||||| ||| || Sbjct 47508 CAACCACCTCTTGCAACTC 47490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620397391374080