Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq32367 136 5e-27 seq42527 123 3e-23 seq36964 123 3e-23 seq37024 120 4e-22 seq1704 120 4e-22 seq40957 116 4e-21 seq44058 111 2e-19 seq42083 89.7 6e-13 seq36378 87.8 2e-12 seq5671 86.0 7e-12 seq37232 82.4 9e-11 seq32508 82.4 9e-11 >seq32367 Length=12065 Score = 136 bits (150), Expect = 5e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || ||||| || || || || ||||| ||| || |||||||| || Sbjct 2413 GTGGAGCCCCTCGTCACGGGAGATCAGCTCGTTGGAGAATGTTAGCCCCGGCATGAGGCC 2472 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||| ||| | || |||||||| ||||||||||||||| || |||||||| Sbjct 2473 GCGCTTCTTCAGCCAGAAGATGGCGCAGAAGCTCCCGGAGAAGAAGATTCCTTCCACACA 2532 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT---GTCAAACCATTTCAT 117461 ||| ||||| | ||| || || |||||| | || | ||| || | |||||||| Sbjct 2533 CGCGAACGCGACAAGCCGTTCCGCGAAGAA---AGTATCTGTCGAGTGGATCCATTTCAG 2589 Query 117462 TGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||||| | || |||||| | || || ||||||| ||| || Sbjct 2590 GGCCCACTCGGCTTTCTTCCTTACGCAAGGAACAGTTTCGATTGC 2634 >seq42527 Length=94160 Score = 123 bits (136), Expect = 3e-23 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || || ||||| || || || || || || || ||||||||||| Sbjct 57980 GTGAAGCCCCTCGTCACGTGAAATCAGCTCGTTGGAAAACGTGAGCCCCGGCATGAGACC 57921 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||||| ||| |||| |||||||| ||||||||||||||| || |||||||| Sbjct 57920 GCGTTTCTTCAGCCAGAAAATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACACA 57861 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || || | || ||||| ||||||||| | | | ||| | |||||||| || Sbjct 57860 GGCGAAAGCGACGAGACGCTCCGCGAAGGAGTCGG---TGGCGTCGATCCATTTCAACGC 57804 Query 117465 CCATTTCGCCTTCTTCT 117481 ||| | || ||||||| Sbjct 57803 CCACTCGGCTTTCTTCT 57787 >seq36964 Length=242943 Score = 123 bits (136), Expect = 3e-23 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || || ||||| || || || || || || || ||||||||||| Sbjct 59763 GTGAAGCCCCTCGTCACGTGAAATCAGCTCGTTGGAAAACGTGAGCCCCGGCATGAGACC 59704 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || ||||||| ||| |||| |||||||| ||||||||||||||| || |||||||| Sbjct 59703 GCGTTTCTTCAGCCAGAAAATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACACA 59644 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || || | || ||||| ||||||||| | | | ||| | |||||||| || Sbjct 59643 GGCGAAAGCGACGAGACGCTCCGCGAAGGAGTCGG---TGGCGTCGATCCATTTCAACGC 59587 Query 117465 CCATTTCGCCTTCTTCT 117481 ||| | || ||||||| Sbjct 59586 CCACTCGGCTTTCTTCT 59570 >seq37024 Length=156878 Score = 120 bits (132), Expect = 4e-22 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || || || || || || || ||||| || || ||||||||||| Sbjct 283 GTGAAGCCCCTCGTCGCGTGAGATCAGCTCGTTGGAGAACGTGAGCCCCGGCATGAGACC 224 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || || |||||||| | || |||||||| ||||||||||||||| || ||||| || Sbjct 223 GCGTTTTTTCAACCAGAAGATCGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACGCA 164 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || |||| | ||||| |||||||| | | || ||| | ||||||||| || Sbjct 163 GGCGAAGGCAACCACCCGCTCCGCGAAGGA---ATCCGATGCGTCGATCCATTTCATCGC 107 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| | || |||||| | | || || | |||| || ||| Sbjct 106 CCACTCGGCTTTCTTCGCGACGCAGGGGATGGTTTCGACGGC 65 >seq1704 Length=114806 Score = 120 bits (132), Expect = 4e-22 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||| || ||||| || || || || || || || ||||| || || ||||||||||| Sbjct 97632 GTGAAGCCCCTCGTCGCGTGAGATCAGCTCGTTGGAGAACGTGAGCCCCGGCATGAGACC 97573 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 || || |||||||| | || |||||||| ||||||||||||||| || ||||| || Sbjct 97572 GCGTTTTTTCAACCAGAAGATCGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACGCA 97513 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATTGC 117464 || || |||| | ||||| |||||||| | | || ||| | ||||||||| || Sbjct 97512 GGCGAAGGCAACCACCCGCTCCGCGAAGGA---ATCCGATGCGTCGATCCATTTCATCGC 97456 Query 117465 CCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 ||| | || |||||| | | || || | |||| || ||| Sbjct 97455 CCACTCGGCTTTCTTCGCGACGCAGGGGATGGTTTCGACGGC 97414 >seq40957 Length=105852 Score = 116 bits (128), Expect = 4e-21 Identities = 179/254 (70%), Gaps = 6/254 (2%) Strand=Plus/Minus Query 9225 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAA 9284 ||||| || ||| | | || || || || | ||||| ||||| || | | ||||| Sbjct 5477 TCAAGAATGTCAGCCCTGTTAGTTGCAGCAACGACAATGATACCGGTATTACCCTCAAAC 5418 Query 9285 CCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATA 9344 |||||||| ||||||||||||||||| | || ||||| | |||||||||| || | Sbjct 5417 CCATCCATTTCTGTCAAAAGTTGGTTGAGGGTCTGTTCTCTTTCATCATTCCCT---CCA 5361 Query 9345 CCA---CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACAT 9401 ||| |||| | | ||| | || || |||||||| ||||||| |||||||| || Sbjct 5360 CCAATTCCAGTCCCTCTTTGTCTCCCAACAGCATCAATTTCATCAACAAAGACAATGCAA 5301 Query 9402 GGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACA 9461 || ||| || ||| | | || | ||| || || | ||||| ||||||||| Sbjct 5300 GGGGCATTCTCTTTGGCCTTCTTGAACAAATCACGGACTCGAGAAGCGCCAACACCAACA 5241 Query 9462 AACATCTCCACAAA 9475 |||||||| ||||| Sbjct 5240 AACATCTCAACAAA 5227 >seq44058 Length=119181 Score = 111 bits (122), Expect = 2e-19 Identities = 289/438 (66%), Gaps = 2/438 (0%) Strand=Plus/Minus Query 9243 TTCGTCGCGGCGATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAA 9302 || || || || | ||| | ||||| || | | ||||| || ||||| ||||||| | Sbjct 58903 TTAGTTGCTGCAACGACTATGATACCAGTATTACCCTCAAACCCGTCCATTTCTGTCAGA 58844 Query 9303 AGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC 9362 |||||||| | || ||||| | ||||||||| || | ||||||| | |||| Sbjct 58843 AGTTGGTTCAGGGTCTGTTCTCTTTCATCATTTCCTCCGCCAATTCCAGCACCTCTTTGC 58784 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 |||| || |||||||| ||||||| || ||||| || || ||| || ||| | Sbjct 58783 CTTCCAACAGCATCAATTTCATCAACAAAAACAATGCAGGGAGCATTCTCTTTGGCCTTC 58724 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9482 | || | ||| ||||| | || || | ||||||||||||||| ||||| | | Sbjct 58723 TTGAATAAATCACGAACTCGAGAAGCACCAATACCAACAAACATCTCAACAAACTCAGAA 58664 Query 9483 GCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9541 | | | |||| || || |||||| | |||||| ||||| || ||| | || || Sbjct 58663 CCTG-AGATTGAGAAAAATGGGACACCTGCTTCACCAGCAATAGCCTTGGCTAATAGCGT 58605 Query 9542 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTTCC 9601 ||| || || ||||| ||| || || | || ||| || || ||| | Sbjct 58604 CTTCCCAGTCCCTGGAGGACCAATAAGAAGAACTCCTTTTGGTATGCGAGCTCCAACAGC 58545 Query 9602 AAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTTTGGCGGC 9661 | | | |||||||| | ||| ||||| ||||| | ||| || || | ||||| | Sbjct 58544 AGTGAACCTCTCAGGCTTCTTCAGAAACTCCACCACCTCCATAAAATCCTGCTTGGCTTC 58485 Query 9662 GTCAATCCCCTCAACATC 9679 || | ||| ||||||| Sbjct 58484 ATCTACCCCGGCAACATC 58467 >seq42083 Length=66024 Score = 89.7 bits (98), Expect = 6e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 ||| || || ||||| ||||||||||| || || || | ||| ||| ||||| | ||| Sbjct 45747 CTGAGGCCTAGGTGTTCCAGCATTGAAAAGTGTCGGGGATGCATGAGTGAACCACCGTTG 45688 Query 107227 GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGC 107286 |||||| || || |||| | |||| |||||||| ||| ||| || || | || Sbjct 45687 AGACATCAAGTGATAAGTCTTAACAGCAGATTCAATGTCATCCTTGTGAATTCCAACAGC 45628 Query 107287 CACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGAT 107345 || | ||| ||||||| || || | |||| | |||| | || || | | || | Sbjct 45627 AACCCTCATCAACATGTGCTGAGGCCTCTCCA-CAACCTGCCCTTGAACCTTCAACAGGT 45569 Query 107346 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCC 107393 | | ||||||| || |||| ||||||||| || | ||| |||||| Sbjct 45568 ATGACCTCTCAAGCGTCTTGAACCCAAAGTAATCATAGTCAAAGTCCC 45521 >seq36378 Length=63125 Score = 87.8 bits (96), Expect = 2e-12 Identities = 98/130 (75%), Gaps = 12/130 (9%) Strand=Plus/Minus Query 9281 AAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG 9340 ||| ||||||||||||||||| || |||||||| || || |||| ||||||||| | Sbjct 47858 AAAGCCATCCATCTCTGTCAAGAGCTGGTTAATTGTCTGCTCCCTCTCATCATTCCC--- 47802 Query 9341 CATACCACC-AGCACTG-----CGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGAC 9394 |||||| ||| | | | ||| | || || |||||||||||||||||||| || Sbjct 47801 ---ACCACCGAGCCCCGCCCCTCTCTGCCTCCCAACAGCATCAATCTCATCAATGAACAC 47745 Query 9395 AATACATGGT 9404 ||| || ||| Sbjct 47744 AATGCACGGT 47735 >seq5671 Length=1874 Score = 86.0 bits (94), Expect = 7e-12 Identities = 134/189 (71%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 9282 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGG- 9340 ||||||||||| || || | | ||| || | ||||| || | |||||||||| || Sbjct 1814 AAACCATCCATTTCAGTGAGCAATTGATTCAGTGTTTGCTCTCTTTCATCATTCCCTCCA 1755 Query 9341 CATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACA 9400 | || ||| | || | ||| | ||||| ||||| |||||||||||||| | | ||| Sbjct 1754 CCTAT-ACCTGTACCTCTCTGCCTCCCCACAGCATCTATCTCATCAATGAATATCAAACA 1696 Query 9401 TGGTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAAC 9460 ||| |||||| ||| | | || | ||| | |||||| || || |||||||| Sbjct 1695 AGGTGAATTTTCTTTGGCCTTGTTGAACAAATCCCTCACCCTTGAAGCCCCTACACCAAC 1636 Query 9461 AAACATCTC 9469 ||||||||| Sbjct 1635 AAACATCTC 1627 >seq37232 Length=10575 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| || ||||| || || ||||| | || || || || || || Sbjct 7155 GCAAAATCACAGTGAAGCCCCTCGTCACGTGAAATCAACTCGTTGGAAAACGTGAGCCCC 7096 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| || ||||||| ||| |||| || ||||| ||||||||||||||| Sbjct 7095 GGCATGAGACCGCGTTTCTTCAGCCAGAAAATCGCACAGAAGCTCCCGGAGAAGAAGATC 7036 Query 117394 CCCTCCAC 117401 || ||||| Sbjct 7035 CCTTCCAC 7028 >seq32508 Length=19167 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAG-AAGCATAGGCCT-GGCATGAGA 117342 |||||| |||||||| | | || || || || ||| ||| | ||| |||||||| Sbjct 4083 GTGGAGGCCCTCATCACACAAGATGAGCTCGTTAGAGTAAG--TGATCCTCGGCATGAGG 4140 Query 117343 CCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACA 117402 || |||||||| | | | || ||||||||||| || ||||||||||| || |||| Sbjct 4141 CCGCGCTTCTTGAGCTAGTAGATAGCGCAGAAGCTACCAGAGAAGAAGATCCCTTCCATG 4200 Query 117403 CACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCAAACCATTTCATT 117462 ||||||||||| | | || || || ||||| || | || | |||||||| Sbjct 4201 CACGCAAACGCGACGAAGCATTCTGCAAAGGAATCGGA---GGAGTTGATCCATTTCAGC 4257 Query 117463 GCCCATTTCGCCTTCTT 117479 ||||| | |||||||| Sbjct 4258 GCCCACTCTGCCTTCTT 4274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589652888671360