Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq41564 86.0 1e-11 >seq41564 Length=31337 Score = 86.0 bits (94), Expect = 1e-11 Identities = 252/379 (66%), Gaps = 16/379 (4%) Strand=Plus/Plus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 |||| || || |||||||||||||| | || || || || ||||| | || | || Sbjct 25420 TTGGAGAGCCTGGTGTTGGTAAAACTGCTGTGGTGGAAGGCTTGGCACAGAGGATTGTTA 25479 Query 150462 ATGGTGATGTTCC-AG-ATTCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGC 150519 || |||||||| || | ||| | |||||| || || | ||| | |||||||| Sbjct 25480 GAGGGGATGTTCCCAGCAATCTTTCT--GATGTTAGGCTTATTGCATTGGACATGGGTGC 25537 Query 150520 ATTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACG--TGTAGACAATTTGCTA 150577 || ||||||| |||||||| | || ||||| || || | || || || ||| | Sbjct 25538 TTTGGTTGCTGGTGCTAAGTATAGGGGAGAATTTGAGGAGAGGTTGAAGGCAGTTT--TG 25595 Query 150578 CAAGAACTAAAAGAACGCGATG---ATGTTATTCTGTTCATCGATGAAATCCATACTATT 150634 ||||| | | || || | | |||||||||||||| |||||||| ||| || Sbjct 25596 AAAGAAGTGGAGGAGGCTGAGGGGAAAGTTATTCTGTTCATTGATGAAATTCATCTGGTT 25655 Query 150635 ATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCT 150694 | ||||||||| |||| | || || ||||| ||| | || || ||| Sbjct 25656 CTTGGTGCTGGTAGGACT---GAAGGATCGATGGATGCTGCCAACCTTTTTAAGCCTATG 25712 Query 150695 CTATCTCGCGGTGAAATT-CGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACA 150753 || ||||||| | || |||| |||||||| ||||| ||| || ||| | || | Sbjct 25713 CTTGCTCGCGGCCAGCTTAAGTGT-ATCGGTGCCACAACGCTCGAGGAGTATAGGAAGTA 25771 Query 150754 CATTGAAAAAGATGCAGCA 150772 | || || ||||||||| Sbjct 25772 TGTGGAGAAGGATGCAGCA 25790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1146936623487072