Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1704 170 4e-37 seq42527 163 5e-35 seq36964 163 5e-35 seq32367 129 1e-24 seq37232 109 1e-18 >seq1704 Length=114806 Score = 170 bits (188), Expect = 4e-37 Identities = 561/862 (65%), Gaps = 20/862 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | |||||||||||||| || ||||||| |||||| || ||| Sbjct 97935 CTGGTACTCTCCAACGCGCTTCTCAAAGAAGTTAGTTTTCCCCTTCAACGAAATCAACTC 97876 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCAT-CTGTTCCAGCA 47957 ||| | | || ||||| |||||||| | || |||| || || ||| Sbjct 97875 CATCCAAGGAAACGGGTTCACCACATTATACACTT-TCCCACACCCAAGCTTCTCAAGCC 97817 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATG----TTCATGCCTATG 48013 | |||||| || |||| || || | ||| |||| ||||| || | Sbjct 97816 AATAATCCGCAACAAACTCAATATACTGACTCATC----TGATCCCCATTCATCCCCAAC 97761 Query 48014 AGGG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | | |||||| || || | | ||||||| |||| |||| ||| || || | ||| Sbjct 97760 AACGCACACGG-CAGCGCGTCGCACACAAACTCCCTCTCAATCTCCACCGCATCACGCAC 97702 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCA 48132 |||| ||| ||||| ||| | || || ||| | | ||| | || ||| Sbjct 97701 AATCCCCTTCACGCGCTCCTCGCTAAGCTTCTTCTCCAGAAGA---GAATACAACAAGCA 97645 Query 48133 GGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACC 48192 || || || | ||| | || ||||| || ||| ||| |||||||||| ||| || Sbjct 97644 CGCGAAATCGCAGTGAAGCCCCTCGTCGCGTGAGATCAGCTCGTTGGAGAACGTGAGCCC 97585 Query 48193 AGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGAT 48252 ||||||| || | | ||| | |||||| || || ||| || ||||||||||| Sbjct 97584 CGGCATGAGACCGCGTTTTTTCAACCAGAAGATCGCGCAGAAGCTCCCGGAGAAGAAGAT 97525 Query 48253 GCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGAT 48312 || ||||| ||||| || | || ||| |||| ||| | ||| ||| Sbjct 97524 CCCTTCCACGCAGGCGAAGGCAACCACCCGCTCCGCGAAGGAATCCGATGCGTC---GAT 97468 Query 48313 CCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 ||| | |||||| || || |||||| || ||| || || || || | ||| |||| Sbjct 97467 CCATTTCATCGCCCACTCGGCTTTCTTCGCGACGCAGGGGATGGTTTCGACGGCGTGGAA 97408 Query 48373 GAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTC 48432 ||| | ||| | |||| | ||||| | ||| ||||||||| Sbjct 97407 GAGGCGGTGTTTCTCGGTGGAGTCCTTGATGTAGGTTTCTAACAGGAGGCTGTACATCTC 97348 Query 48433 AGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTG 48492 ||||| | ||||| || ||||||||||| ||||||||||| | || || | || Sbjct 97347 GGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAGAAGGCGCGTGCTTCGGCGATTTG 97288 Query 48493 CACTTCTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAA 48551 |||||| | ||| || ||| || ||||| || ||| || || || || || || | Sbjct 97287 GACTTCTTTCATGAACCT-TCCGGCGAGATTTTCGAGGACGATGCCGTCGGAGGCGGCGA 97229 Query 48552 AGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCT 48611 ||||||| ||||| || | | ||| ||||| ||| || | |||| | | |||| | Sbjct 97228 AGAAGGCGAGGACGTGGGTGATGAAGTGGCGTTCGCCGTCGTTGAGGGAGTCCCAGTCGC 97169 Query 48612 GTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGT 48671 | | ||| | | ||||| |||||||| | ||||||||||| ||||| ||||| |||| Sbjct 97168 GGAGGTCGTGGGAGAGGTCGACTTCTTCGGCGGTCCAGAAGGAGGCGAGGGCTTTCTTGT 97109 Query 48672 ACATGCCCCATATGTCCGGATA 48693 |||| ||| || || || || Sbjct 97108 ACATTTGCCAGATTTCGGGGTA 97087 >seq42527 Length=94160 Score = 163 bits (180), Expect = 5e-35 Identities = 426/646 (66%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||| || || | ||||||| ||| ||||| ||| | Sbjct 58082 AAACTCCCTCTCAATCTCCACTGCGTCACGCACAATCCCCTTCACGCGCTCCTCGCTAAG 58023 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || | | ||| || | || | || ||| || || || | ||| | || ||||| Sbjct 58022 CTTCGTCCTCAGCAGCGAG---TACAACAAGCACGCGAAATCGCAGTGAAGCCCCTCGTC 57966 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || || ||| ||||||| || ||| || ||||||| || | | || ||||| Sbjct 57965 ACGTGAAATCAGCTCGTTGGAAAACGTGAGCCCCGGCATGAGACCGCGTTTCTTCAGCCA 57906 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 |||||| || ||| || ||||||||||| || ||||| ||||| ||| ||| Sbjct 57905 GAAAATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACACAGGCGAAAGCGACGAG 57846 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 | ||| |||| || || | ||| |||||| | |||||| || || ||||| Sbjct 57845 ACGCTCCGCGAAGGAGTCGGTGGCGTC---GATCCATTTCAACGCCCACTCGGCTTTCTT 57789 Query 48340 CTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGC 48399 ||||| ||| || || || || | ||| |||||||| || ||| | | |||| Sbjct 57788 CTTGACGCAGGGGATGGTTTCCACGGCGCGGAAGAGGTTGGATTTTTCAGCGGAGTCCTT 57729 Query 48400 AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTG 48459 | ||||| | ||| ||||||||| ||||| | ||||| || |||||||| Sbjct 57728 GATGTAGGTTTCTAACAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTG 57669 Query 48460 GAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-A 48518 ||| | ||||||||| | ||||| || ||||| | ||| || ||| || | Sbjct 57668 GAAGCTGTAGAAGGCGCGTGCCTCGGCGGATTGGACTTCCTTCATGAACCT-TCCGGCGA 57610 Query 48519 GATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAAT 48578 |||| || ||||||||| || || || || |||||||| ||||| || | | ||| | Sbjct 57609 GATTTTCGAGGACTATCCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAGT 57550 Query 48579 GGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTT 48638 |||| ||| || |||||| | | |||| | | || || || || || | Sbjct 57549 GGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGATCGGACGATAGATCAACCTCCT 57490 Query 48639 CCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || | |||||||| || || ||||| |||||||| |||| || Sbjct 57489 CCGCCGTCCAGAACGATGCTTCGGCTTTCTTGTACATTTCCCAAAT 57444 >seq36964 Length=242943 Score = 163 bits (180), Expect = 5e-35 Identities = 426/646 (66%), Gaps = 8/646 (1%) Strand=Plus/Minus Query 48040 AAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGG 48099 ||||||| |||| |||| ||| || || | ||||||| ||| ||||| ||| | Sbjct 59865 AAACTCCCTCTCAATCTCCACTGCGTCACGCACAATCCCCTTCACGCGCTCCTCGCTAAG 59806 Query 48100 TTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTC 48159 || | | ||| || | || | || ||| || || || | ||| | || ||||| Sbjct 59805 CTTCGTCCTCAGCAGCGAG---TACAACAAGCACGCGAAATCGCAGTGAAGCCCCTCGTC 59749 Query 48160 CCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCA 48219 || || ||| ||||||| || ||| || ||||||| || | | || ||||| Sbjct 59748 ACGTGAAATCAGCTCGTTGGAAAACGTGAGCCCCGGCATGAGACCGCGTTTCTTCAGCCA 59689 Query 48220 GAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAG 48279 |||||| || ||| || ||||||||||| || ||||| ||||| ||| ||| Sbjct 59688 GAAAATGGCGCAGAAGCTCCCGGAGAAGAAGATCCCTTCCACACAGGCGAAAGCGACGAG 59629 Query 48280 CCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTT 48339 | ||| |||| || || | ||| |||||| | |||||| || || ||||| Sbjct 59628 ACGCTCCGCGAAGGAGTCGGTGGCGTC---GATCCATTTCAACGCCCACTCGGCTTTCTT 59572 Query 48340 CTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGC 48399 ||||| ||| || || || || | ||| |||||||| || ||| | | |||| Sbjct 59571 CTTGACGCAGGGGATGGTTTCCACGGCGCGGAAGAGGTTGGATTTTTCAGCGGAGTCCTT 59512 Query 48400 AACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTG 48459 | ||||| | ||| ||||||||| ||||| | ||||| || |||||||| Sbjct 59511 GATGTAGGTTTCTAACAGGAGGCTGTACATCTCGGAGTGGATGTTCTCGATCGCGATCTG 59452 Query 48460 GAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGC-A 48518 ||| | ||||||||| | ||||| || ||||| | ||| || ||| || | Sbjct 59451 GAAGCTGTAGAAGGCGCGTGCCTCGGCGGATTGGACTTCCTTCATGAACCT-TCCGGCGA 59393 Query 48519 GATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAAT 48578 |||| || ||||||||| || || || || |||||||| ||||| || | | ||| | Sbjct 59392 GATTTTCGAGGACTATCCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGTGATGAAGT 59333 Query 48579 GGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTT 48638 |||| ||| || |||||| | | |||| | | || || || || || | Sbjct 59332 GGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGAGATCGGACGATAGATCAACCTCCT 59273 Query 48639 CCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 || | |||||||| || || ||||| |||||||| |||| || Sbjct 59272 CCGCCGTCCAGAACGATGCTTCGGCTTTCTTGTACATTTCCCAAAT 59227 >seq32367 Length=12065 Score = 129 bits (142), Expect = 1e-24 Identities = 300/446 (67%), Gaps = 11/446 (2%) Strand=Plus/Plus Query 48043 CTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCTGAGGGTTT 48102 |||| |||| |||| ||| || || ||||||| | | ||| ||| | | | || Sbjct 2314 CTCCCTCTCGATCTCCACCGCGTCATGCACAATCCCCACCATGCGCTCCTCGGTGAGCTT 2373 Query 48103 GTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCG 48162 | | | |||| | || || | || || || ||||| | ||| | || ||||| || Sbjct 2374 GGTCCTCAGGAG---GGAGTACATCAGACACGCGAAGTCGCAGTGGAGCCCCTCGTCACG 2430 Query 48163 GCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAA 48222 | ||| ||| |||||||||| || || ||||||| || | || || |||||||| Sbjct 2431 GGAGATCAGCTCGTTGGAGAATGTTAGCCCCGGCATGAGGCCGCGCTTCTTCAGCCAGAA 2490 Query 48223 AATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCT 48282 || || ||| || ||||||||||| || ||||| |||||||||| |||| Sbjct 2491 GATGGCGCAGAAGCTCCCGGAGAAGAAGATTCCTTCCACACACGCGAACGCGACAAGCCG 2550 Query 48283 CTCTCCGAAAGAAGCGT-TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCT 48341 || |||| ||| | | | | || |||||| || ||||| || || |||||| Sbjct 2551 TTCCGCGAAGAAAGTATCTGTCGAGTG-GATCCATTTCAGGGCCCACTCGGCTTTCTTCC 2609 Query 48342 TGATGCATGGCATCGTCTCTATGGCCCGGAAGAG-CT--TCTTGCACTCACCTGCGTCCG 48398 | | ||| || | || || || || |||||||| || |||| ||| | | |||| Sbjct 2610 TTACGCAAGGAACAGTTTCGATTGCACGGAAGAGTCTGCTCTT---CTCCGCGGAGTCCT 2666 Query 48399 CAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCT 48458 || ||||| | ||| |||||| || ||||| | ||||| || ||||||| Sbjct 2667 TAATGTAGGTTTCTAAGAGCAAACTGTACATTTCCGAGTGGATGTTCTCAATGGCGATCT 2726 Query 48459 GGAACCCGTAGAAGGCCCTGGCCTCA 48484 |||| ||||||||||| | ||||||| Sbjct 2727 GGAATCCGTAGAAGGCGCGGGCCTCA 2752 Score = 107 bits (118), Expect = 4e-18 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 48445 CTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGA 48504 ||| || ||||||||||| ||||||||||| | |||||| || ||||| | Sbjct 2811 CTCAATGGCGATCTGGAATCCGTAGAAGGCGCGCGCCTCAGCGGATTGGACTTCCTTCAT 2870 Query 48505 GAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGA 48563 ||| || ||| || || || ||| |||| || || || ||||| |||||||| || |||| Sbjct 2871 GAACCT-TCCGGCGAGGTTTTCAATGACAATGCCGTCAGAAGCGGCAAAGAAAGCCAGGA 2929 Query 48564 CATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACGTCTTTGC 48623 | || | | || |||||||||| || ||| || | |||||| | | ||| | | Sbjct 2930 CGTGGGTGATAAAGTGGCGCTCGTCGTCGGTCAGGGAGTTCCAGTGGCGGAGGTCGTCGG 2989 Query 48624 CCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATGCCCCATA 48683 ||||| || || || | |||||||| || || ||||| |||||||| |||||| Sbjct 2990 AGAGGTCGACCTCCTCAGCGGTCCAGAATGAAGCTTCGGCTTTCTTGTACATTTCCCATA 3049 Query 48684 T 48684 | Sbjct 3050 T 3050 >seq37232 Length=10575 Score = 109 bits (120), Expect = 1e-18 Identities = 247/368 (67%), Gaps = 10/368 (3%) Strand=Plus/Minus Query 48322 CGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTT 48381 ||||||||| || |||||||||| ||| || || || || | ||| |||||||| || Sbjct 7010 CGCCCAGTCCGCTTTCTTCTTGACGCAGGGGATGGTGTCGACGGCGCGGAAGAGGTTGGA 6951 Query 48382 GCACTCACCTGCGTCCGCAACATAGGT----AGTGAGCAGCTTTGCGTACATCTCAGAGT 48437 ||| | | |||| | ||||| | | | ||| ||||||||| |||| Sbjct 6950 TTTCTCGGCGGAGTCCTTGATGTAGGTTTCCAATAGGAGGCT----GTACATCTCGGAGT 6895 Query 48438 GCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTT 48497 | | || || || |||||||||||||| |||||||| | ||||| || |||| Sbjct 6894 GGATGTTTTCGATGGCGATCTGGAACCCATAGAAGGCGCGTGCCTCGGCGGATTGGACTT 6835 Query 48498 CTGTGGAGAATCTCTCCAGC-AGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAG 48556 || | ||| || ||| || ||||| || || ||||| || || || || |||||| Sbjct 6834 CTTTCATGAACCT-TCCGGCGAGATTTTCTAGGAATATCCAGTCGGAGGCGGCGAAGAAG 6776 Query 48557 GCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTACG 48616 || ||||| || | | ||| ||||| ||| || ||||| | | |||| | | Sbjct 6775 GCGAGGACGTGGGTGATGAAGTGGCGTTCGCCGTCTGTGAGGGAGTCCCAGTGGCGGAGA 6716 Query 48617 TCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACATG 48676 || || || |||||||| | ||||||||||| || ||||| |||||||| Sbjct 6715 TCGGATGAGAGATCGACTTCTTCGGCGGTCCAGAAGGAGGCTTCGGCTTTCTTGTACATT 6656 Query 48677 CCCCATAT 48684 |||| || Sbjct 6655 TCCCAGAT 6648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931015054069760