Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04]
44,464 sequences; 394,454,697 total letters
Query= NC_019723.1
Length=47090
Score E
Sequences producing significant alignments: (Bits) Value
seq11259 5766 0.0
>seq11259
Length=3298
Score = 5766 bits (6394), Expect = 0.0
Identities = 3258/3302 (99%), Gaps = 4/3302 (0%)
Strand=Plus/Minus
Query 966 GTTTCACTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGGCAAAAAACTACCGTG 1025
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3298 GTTTC-CTAATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGGCAAAAAACTACCGTG 3240
Query 1026 AAAAGTCGGTGGATGTGGCGGGTTATGATGAACTTGCTGCTTTTGATGATGATATTGAAC 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3239 AAAAGTCGGTGGATGTGGCGGGTTATGATGAACTTGCTGCTTTTGATGATGATATTGAAC 3180
Query 1086 AGGAAGGCTCTCCGACGTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGT 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3179 AGGAAGGCTCTCCGACGTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGT 3120
Query 1146 CCATCCGTGGCTCCACGCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTG 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3119 CCATCCGTGGCTCCACGCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTG 3060
Query 1206 AATCCCCGCATTTTATGCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATC 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3059 AATCCCCGCATTTTATGCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATC 3000
Query 1266 TTAAATTTGGCGACAAAGAGACGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCA 1325
|||||||||||||||||||||||||| |||||||
Sbjct 2999 TTAAATTTGGCGACAAAGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCA 2940
Query 1326 GCGTGTTTTATCTCTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTA 1385
||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2939 GCGCTTTTTAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTA 2880
Query 1386 CTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGGCATTCTCTGGT 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2879 CTGATGCCCGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGGCATTCTCTGGT 2820
Query 1446 TTTCGTCATCCGGTGAAGAGATTGAGCCACCTGACAGTGTGACCTTTCACATCTGGACAG 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2819 TTTCGTCATCCGGTGAAGAGATTGAGCCACCTGACAGTGTGACCTTTCACATCTGGACAG 2760
Query 1506 CGTACAGCCCGTTCACCACCTGGGTGCAGATTGTCAAAGACTGGATGAAAACGAAAGGGG 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2759 CGTACAGCCCGTTCACCACCTGGGTGCAGATTGTCAAAGACTGGATGAAAACGAA-GGGG 2701
Query 1566 ATACGGGAAAACGTAAAACCTTCGTAAACACCACGCTCGGTGAGACGTGGGAGGCGAAAA 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2700 ATACGGGAAAACGTAAAACCTTCGTAAACACCACGCTCGGTGAGACGTGGGAGGCGAAAA 2641
Query 1626 TTGGCGAACGTCCGGATGCTGAAGTGATGGCAGAGCGGAAAGAGCATTATTCAGCGCCCG 1685
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2640 TTGGCGAACGTCCGGATGCTGAAGTGATGGCAGAGCGGAAAGAGCATTATTCAGCGGGGG 2581
Query 1686 TTCCTGACCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAGCTGGACCGCTACGAAA 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2580 GGCCTGACCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAGCTGGACCGCTACGAAA 2521
Query 1746 TGCGCGTATGGGGATGGGGGCCGGGTGAGGAAAGCTGGCTGATTGACCGGCAGATTATTA 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2520 TGCGCGTATGGGGATGGGGGCCGGGTGAGGAAAGCTGGCTGATTGACCGGCAGATTATTA 2461
Query 1806 TGGGCCGCCACGACGATGAACAGACGCTGCTGCGTGTGGATGAGGCCATCAATAAAACCT 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2460 TGGGCCGCCACGACGATGAACAGACGCTGCTGCGTGTGGATGAGGCCATCAATAAAACCT 2401
Query 1866 ATACCCGCCGGAATGGTGCAGAAATGTCGATATCCCGTATCTGCTGGGATACTGGCGGGA 1925
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 2400 ATACCCGCCGGAATGGTGCAGAAATGTGGAGGGCCCGTATCTGCTGGGATACTGGCGGGA 2341
Query 1926 TTGACCCGACCATTGTGTATGAACGCTCGAAAAAACATGGGCTGTTCCGGGTGATCCCCA 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2340 TTGACCCGACCATTGTGTATGAACGCTCGAAAAAACATGGGCTGTTCCGGGTGATCCCCA 2281
Query 1986 TTAAAGGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCACGTAAGCGAAACAAAA 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2280 TTAAAGGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCACGTAAGCGAAACAAAA 2221
Query 2046 ACGGGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCT 2105
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2220 ACGGGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCT 2161
Query 2106 TCACACTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACC 2165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2160 TCACACTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACC 2101
Query 2166 CGGATATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAAT 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2100 CGGATATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAAT 2041
Query 2226 GGGTGGATGGCAGGaaaaaaaTACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCG 2285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2040 GGGTGGATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCG 1981
Query 2286 ACTGCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATC 2345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1980 ACTGCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATC 1921
Query 2346 TCAGTGCGCTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAACCAACAAGAAAACAC 2405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920 TCAGTGCGCTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAACCAACAAGAAAACAC 1861
Query 2406 TGGCAGATTACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCGACAGGAAGAACTTGC 2465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1860 TGGCAGATTACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCGACAGGAAGAACTTGC 1801
Query 2466 CGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACAGTACAGAA 2525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 CGCTGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACAGTACAGAA 1741
Query 2526 AGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAATATATTGC 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 AGACGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAATATATTGC 1681
Query 2586 AGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGATTTTATGT 2645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 AGAGCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGATTTTATGT 1621
Query 2646 ATGAAAACGCCCACCATTCCCACCCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAA 2705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 ATGAAAACGCCCACCATTCCCACCCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAA 1561
Query 2706 TATGCCGGTTATCACGGCGGTGGCAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCA 2765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560 TATGCCGGTTATCACGGCGGTGGCAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCA 1501
Query 2766 CCGAGTGAAAGTGTGGATGCAGCCCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCA 2825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 CCGAGTGAAAGTGTGGATGCAGCCCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCA 1441
Query 2826 GACGATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAGCTGCATCAGGATCAT 2885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1440 GACGATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAGCTGCATCAGGATCAT 1381
Query 2886 ATCGTCGGGTCTTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGCTATCTGGGCATCGGG 2945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 ATCGTCGGGTCTTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGCTATCTGGGCATCGGG 1321
Query 2946 GAGGAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGGAAAGAGTTTGCCGAG 3005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 GAGGAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGGAAAGAGTTTGCCGAG 1261
Query 3006 GATGACTGCTGCTGCATTGACGTTGAGCGAAAACGCACGTTTACCATGATGATTCGGGAA 3065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 GATGACTGCTGCTGCATTGACGTTGAGCGAAAACGCACGTTTACCATGATGATTCGGGAA 1201
Query 3066 GGTGTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACCTGGGATACCAGT 3125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1200 GGTGTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACCTGGGATACCAGT 1141
Query 3126 TCGTCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAGCGCATCAGCAACCCG 3185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TCGTCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAGCGCATCAGCAACCCG 1081
Query 3186 AACAATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGTGCG 3245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 AACAATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGTGCG 1021
Query 3246 GCGCTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATGCCGCAGAAATGGACA 3305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1020 GCGCTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATGCCGCAGAAATGGACA 961
Query 3306 TGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGTTTTTGAACCCGTG 3365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TGGATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGTTTTTGAACCCGTG 901
Query 3366 GAGGACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAGATG 3425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GAGGACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAGATG 841
Query 3426 CTCGACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAGGCGATGTATGCCGCC 3485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 CTCGACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAGGCGATGTATGCCGCC 781
Query 3486 ACCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAACAGT 3545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 ACCATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAACAGT 721
Query 3546 CAGGAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCCGCA 3605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 CAGGAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCCGCA 661
Query 3606 GCGCCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCGGGTGACTCACTGAAC 3665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GCGCCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCGGGTGACTCACTGAAC 601
Query 3666 CTGCAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTGCGG 3725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 CTGCAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTGCGG 541
Query 3726 TATATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGGAATTACGCCCAGATG 3785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TATATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGGAATTACGCCCAGATG 481
Query 3786 AGCTACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGGCGA 3845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AGCTACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGGCGA 421
Query 3846 AAATTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCCATC 3905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AAATTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCCATC 361
Query 3906 GTTCGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTTCAGGAAGCCCGCAGT 3965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GTTCGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTTCAGGAAGCCCGCAGT 301
Query 3966 GCCTGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATCGATGGTCTGAAAGAA 4025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 GCCTGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATCGATGGTCTGAAAGAA 241
Query 4026 GTTCAGGAAGCGGTGATGCTGATAGAAGCCGGACTGAGTACCTACGAGAAAGAGTGCGCA 4085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 GTTCAGGAAGCGGTGATGCTGATAGAAGCCGGACTGAGTACCTACGAGAAAGAGTGCGCA 181
Query 4086 AAACGCGGTGACGACTATCAGGAAATTTTTGCCCAGCAGGTCCGTGAAACGATGGAGCGC 4145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 AAACGCGGTGACGACTATCAGGAAATTTTTGCCCAGCAGGTCCGTGAAACGATGGAGCGC 121
Query 4146 CGTGCAGCCGGTCTTAAACCGCCCGCCTGGGCGGCTGCAGCATTTGAATCCGGGCTGCGA 4205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CGTGCAGCCGGTCTTAAACCGCCCGCCTGGGCGGCTGCAGCATTTGAATCCGGGCTGCGA 61
Query 4206 CAATCAACAGAGGAGGAGAAGAGTGACAGCAGAGCTGCGTAATCTCCCGCATATTGCCAG 4265
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 60 CAATCAACAGAGGAGGAGAAGAGTGACAGCAGAGCTGCGT-ATCTCCCGCATA-TGCCAG 3
Query 4266 CA 4267
||
Sbjct 2 CA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 150486899435136
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