Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq32367 136 5e-27 seq42527 123 3e-23 seq36964 123 3e-23 seq37024 120 4e-22 seq1704 120 4e-22 seq5671 118 1e-21 seq44058 107 2e-18 seq42083 98.7 1e-15 seq36378 84.2 3e-11 seq37232 82.4 9e-11 seq32508 82.4 9e-11 >seq32367 Length=12065 Score = 136 bits (150), Expect = 5e-27 Identities = 166/225 (74%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 || ||| ||||||| || || | |||||| || | ||||| |||||||| | || Sbjct 2634 GCAATCGAAACTGTTCCTTGCGTAAGGAAGAAAGCCGAGTGGGCCCTGAAATGGATCCAC 2575 Query 65056 ---ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATC 65112 ||| | || | |||||| || || ||| | ||||| ||||||||||| || ||| Sbjct 2574 TCGACAGATACT---TTCTTCGCGGAACGGCTTGTCGCGTTCGCGTGTGTGGAAGGAATC 2518 Query 65113 TTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGC 65172 |||||||||||| |||||||| || | ||| |||||||||| || |||||||| || Sbjct 2517 TTCTTCTCCGGGAGCTTCTGCGCCATCTTCTGGCTGAAGAAGCGCGGCCTCATGCCGGGG 2458 Query 65173 CTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||| ||||| || || || || ||||| || ||||| |||||| Sbjct 2457 CTAACATTCTCCAACGAGCTGATCTCCCGTGACGAGGGGCTCCAC 2413 >seq42527 Length=94160 Score = 123 bits (136), Expect = 3e-23 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGC 65080 ||||||| || | ||||| |||||||| | ||| | | | ||||||||| |||| Sbjct 57787 AGAAGAAAGCCGAGTGGGCGTTGAAATGGATCGACGCCA---CCGACTCCTTCGCGGAGC 57843 Query 65081 GCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTT 65140 | || | || || || |||||||| || ||||||||||||||| |||||||| |||| Sbjct 57844 GTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCCATTT 57903 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| ||||||| || ||||||||||| || || || || || || || ||||| | Sbjct 57904 TCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAGCTGATTTCAC 57963 Query 65201 GAGATGAGGGTCTCCAC 65217 | || ||||| || ||| Sbjct 57964 GTGACGAGGGGCTTCAC 57980 >seq36964 Length=242943 Score = 123 bits (136), Expect = 3e-23 Identities = 146/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 65021 AGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGC 65080 ||||||| || | ||||| |||||||| | ||| | | | ||||||||| |||| Sbjct 59570 AGAAGAAAGCCGAGTGGGCGTTGAAATGGATCGACGCCA---CCGACTCCTTCGCGGAGC 59626 Query 65081 GCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTT 65140 | || | || || || |||||||| || ||||||||||||||| |||||||| |||| Sbjct 59627 GTCTCGTCGCTTTCGCCTGTGTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGCGCCATTT 59686 Query 65141 ATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCC 65200 ||| ||||||| || ||||||||||| || || || || || || || ||||| | Sbjct 59687 TCTGGCTGAAGAAACGCGGTCTCATGCCGGGGCTCACGTTTTCCAACGAGCTGATTTCAC 59746 Query 65201 GAGATGAGGGTCTCCAC 65217 | || ||||| || ||| Sbjct 59747 GTGACGAGGGGCTTCAC 59763 >seq37024 Length=156878 Score = 120 bits (132), Expect = 4e-22 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 ||| || |||| | || || | | |||||| || | ||||| ||||||||| | ||| Sbjct 65 GCCGTCGAAACCATCCCCTGCGTCGCGAAGAAAGCCGAGTGGGCGATGAAATGGATCGAC 124 Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 || | | |||||||| ||||| | |||| || || || ||||| || |||||| Sbjct 125 GCATCGGAT---TCCTTCGCGGAGCGGGTGGTTGCCTTCGCCTGCGTGGAAGGGATCTTC 181 Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175 ||||||||| |||||||| || | |||||||| || || ||||||||||| || || Sbjct 182 TTCTCCGGGAGCTTCTGCGCGATCTTCTGGTTGAAAAAACGCGGTCTCATGCCGGGGCTC 241 Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || || || || || || || ||||| || ||| Sbjct 242 ACGTTCTCCAACGAGCTGATCTCACGCGACGAGGGGCTTCAC 283 >seq1704 Length=114806 Score = 120 bits (132), Expect = 4e-22 Identities = 160/222 (72%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 ||| || |||| | || || | | |||||| || | ||||| ||||||||| | ||| Sbjct 97414 GCCGTCGAAACCATCCCCTGCGTCGCGAAGAAAGCCGAGTGGGCGATGAAATGGATCGAC 97473 Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 || | | |||||||| ||||| | |||| || || || ||||| || |||||| Sbjct 97474 GCATCGGAT---TCCTTCGCGGAGCGGGTGGTTGCCTTCGCCTGCGTGGAAGGGATCTTC 97530 Query 65116 TTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTA 65175 ||||||||| |||||||| || | |||||||| || || ||||||||||| || || Sbjct 97531 TTCTCCGGGAGCTTCTGCGCGATCTTCTGGTTGAAAAAACGCGGTCTCATGCCGGGGCTC 97590 Query 65176 TGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 ||||| || || || || || || || ||||| || ||| Sbjct 97591 ACGTTCTCCAACGAGCTGATCTCACGCGACGAGGGGCTTCAC 97632 >seq5671 Length=1874 Score = 118 bits (130), Expect = 1e-21 Identities = 303/448 (68%), Gaps = 20/448 (4%) Strand=Plus/Plus Query 175191 TGATGTTGAGGGGATTGACGCCGCCAAAGATGAACTTGAAGAGATTGTGGATTTTCTCAA 175250 |||||| | || |||| | ||||| | || | |||||||||| || || | || Sbjct 1416 TGATGTGGCTGGAGTTGATGAAGCCAAGCAAGATTTCCAAGAGATTGTTGAGTTCTTGAA 1475 Query 175251 GCAACCCGAGAGATATTTTG-GAAGT-GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCG 175308 | || | ||||| |||| | ||| || ||||| || ||| ||| | ||||| | Sbjct 1476 G--ACTCCAGAGAAGTTTTCAGCAGTTGGAGCCAAAATTCCCAAAGGAG---TTCTCTTG 1530 Query 175309 GGTAAGCCA---GGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAAT 175365 | | |||| || || |||||||| | || ||| || || || || ||| || Sbjct 1531 GTTGGGCCACCAGGGACTGGAAAGACATTGCTGGCCAAGGCAATTGCAGGAGAAGCAGGG 1590 Query 175366 GTCCCATTCATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGC 175424 || |||||| | | || |||| || | || | ||||||||||||||||| || || Sbjct 1591 GTTCCATTCTTTTCTCTG-TCTGGGTCAGAGTTCATTGAGATGTTTGTTGGTGTAGGGGC 1649 Query 175425 CAAAAGGGTTCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCAT 175484 |||||| | ||| | || | | ||| |||||| ||| ||| | | ||||| Sbjct 1650 TTCAAGGGTGAGGGATTTGTTCAACAAGGCCAAAGAAAATTCACCTTGTTTGATATTCAT 1709 Query 175485 TGATGAGATTGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTATG-CCAGCAAATGACG 175543 ||||||||| ||||| ||||| | ||| | | | ||| || | || ||||| | Sbjct 1710 TGATGAGATAGATGCTGTGGGGAGGCAGAGAGGTACAGGT-ATAGGTGGAGGGAATGATG 1768 Query 175544 AGAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGAC---AATGAGA 175600 | ||||| |||||| | |||||| | ||||| || |||||||| ||| || || | | Sbjct 1769 AAAGAGAGCAAACACTGAATCAATTGCTCACTGAAATGGATGG-TTTCACTGGAA--ACA 1825 Query 175601 CTGGCATTGTGGTTATTGCGGCCACTAA 175628 |||| || | |||||||| |||||||| Sbjct 1826 CTGGAGTTATAGTTATTGCTGCCACTAA 1853 >seq44058 Length=119181 Score = 107 bits (118), Expect = 2e-18 Identities = 218/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 ||||| || || ||||| || | ||| || || || |||||| || ||||||||| Sbjct 58590 CCAGGGACTGGGAAGACGCTATTAGCCAAGGCTATTGCTGGTGAAGCAGGTGTCCCATTT 58649 Query 175375 ATC-CAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGT 175433 || || | ||| | | | ||||| ||||||||||||||| | ||||| | || Sbjct 58650 TTCTCAAT-CTCAGGTTCTGAGTTTGTTGAGATGTTTGTTGGTATTGGTGCTTCTCGAGT 58708 Query 175434 TCGCGATCTCTTTGAAATCGCCCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGAT 175493 ||| ||| | || | | ||| || ||| || || ||||| || ||||||| || Sbjct 58709 TCGTGATTTATTCAAGAAGGCCAAAGAGAATGCTCCCTGCATTGTTTTTGTTGATGAAAT 58768 Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGGTGGTAT--GC-CAGCAAATGACGAGAGAGA 175550 |||||| || || | |||| || | || ||| || || || |||||| || ||||| Sbjct 58769 TGATGCTGTTGGAAGGCAA---AGAGGTGCTGGAATTGGCGGAGGAAATGATGAAAGAGA 58825 Query 175551 ACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGT 175610 ||| || | || ||||| || || || ||||| || ||||| | | ||||| || | Sbjct 58826 ACAGACCCTGAACCAACTTCTGACAGAAATGGACGGGTTTGAGGGTAATACTGGTATCAT 58885 Query 175611 GGTTATTGCGGCCACTAA 175628 || |||| || ||||| Sbjct 58886 AGTCGTTGCAGCAACTAA 58903 >seq42083 Length=66024 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 75129 GGGACTATGATTTTGGTTACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCT-TCAACGG 75187 |||||| ||| | || ||||||||| |||| || ||||||| | || || | | || Sbjct 45521 GGGACTTTGACTATGATTACTTTGGGTTCAAGACGCTTGAGAGGTCATACCTGTTGAAGG 45580 Query 75188 CTCGATGGCATCCTCATGGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATC 75247 || | |||| | |||| | || ||| ||||||| ||| |||| || | || || Sbjct 45581 TTCAAGGGCAGGTTG-TGGAGAGGCCTCAGCACATGTTGATGAGGGTTGCTGTTGGAATT 45639 Query 75248 CACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATGTTC 75307 ||| ||| |||||||| |||| | |||| || || |||||| ||| | |||| Sbjct 45640 CACAAGGATGACATTGAATCTGCTGTTAAGACTTATCACTTGATGTCTCAACGGTGGTTC 45699 Query 75308 ATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAG 75355 | ||| ||| | || || || ||||||||||| ||||| || || ||| Sbjct 45700 ACTCATGCATCCCCGACACTTTTCAATGCTGGAACACCTAGGCCTCAG 45747 >seq36378 Length=63125 Score = 84.2 bits (92), Expect = 3e-11 Identities = 191/286 (67%), Gaps = 20/286 (7%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || || || || |||||||| || || |||| | || |||||| | || ||| Sbjct 47583 CCGGGAACAGGGAAGACCCTTCTGGCGAGAGCGGTGGCTGGTGAAGCCGGCACGCCGTTC 47642 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || |||| | || | | || |||||| | ||||| || || ||||| ||||| Sbjct 47643 TTCTCGTGCGCGGCTTCTGAGTTCGTGGAGCTCTTTGTGGGGGTTGGTGCGTCCAGGGTG 47702 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATCAA----CCATGTATTGTCTTCATTGATGA 175490 | ||| | ||||| | || |||| || || || ||||| ||||||||||| Sbjct 47703 AGGGATTTGTTTGAGAAGGC----GAAATCGAAGGCACCGTGCATTGTGTTCATTGATGA 47758 Query 175491 GATTGATGCGGTGGGCAAGCAACG-----CAGCGCT-GGTGGTATGCCAGCAAATGACGA 175544 ||||||||| || || | ||| | | | ||| |||||| | ||||| || Sbjct 47759 GATTGATGCTGTTGGGAGGCAGAGAGGGGCGGGGCTCGGTGGTGGG------AATGATGA 47812 Query 175545 GAGAGAACAAACAATTAATCAACTACTCACCGAGATGGATGGCTTT 175590 ||| || || |||||||| || || | || ||||||||||||||| Sbjct 47813 GAGGGAGCAGACAATTAACCAGCTCTTGACAGAGATGGATGGCTTT 47858 >seq37232 Length=10575 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 ||||| || ||||||||||||||| ||||| || |||| ||| ||||||| || ||| Sbjct 7028 GTGGAAGGGATCTTCTTCTCCGGGAGCTTCTGTGCGATTTTCTGGCTGAAGAAACGCGGT 7087 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAG 65220 |||||||| || || || || || || | ||||| || || ||||| || ||| Sbjct 7088 CTCATGCCGGGGCTCACGTTTTCCAACGAGTTGATTTCACGTGACGAGGGGCTTCACTGT 7147 Query 65221 GAGTTTGC 65228 || ||||| Sbjct 7148 GATTTTGC 7155 >seq32508 Length=19167 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/197 (71%), Gaps = 7/197 (4%) Strand=Plus/Minus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCTCCTTCGCCGAGCGC 65082 |||||||| | ||||| |||||||| | || | || ||||| || || || Sbjct 4274 AAGAAGGCAGAGTGGGCGCTGAAATGGATCAACTCC---TCCGATTCCTTTGCAGAATGC 4218 Query 65083 CTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTAT 65142 | | ||||||||||| |||| || ||||||||||| || ||||||||||| || Sbjct 4217 TTCGTCGCGTTTGCGTGCATGGAAGGGATCTTCTTCTCTGGTAGCTTCTGCGCTATCTAC 4158 Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCC-AGGCCTATGCTT-CTCAAATGAACTTATTTCCC 65200 | | | |||||||| || |||||||| ||| | ||| ||| || || || || | Sbjct 4157 TAGCTCAAGAAGCGCGGCCTCATGCCGAGGATCA--CTTACTCTAACGAGCTCATCTTGT 4100 Query 65201 GAGATGAGGGTCTCCAC 65217 | |||||||| |||||| Sbjct 4099 GTGATGAGGGCCTCCAC 4083 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596238026616320