Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq11259 2749 0.0 >seq11259 Length=3298 Score = 2749 bits (3048), Expect = 0.0 Identities = 2595/3299 (79%), Gaps = 26/3299 (1%) Strand=Plus/Minus Query 1163 AACGGTCGCGGGTTCTGGTGTCTGGGTGGTAAAGCGGCGAAAAACTATCGTGAGAAATCG 1222 || || || || |||||||| ||||| ||||||||||| |||||||| ||||| || ||| Sbjct 3291 AATGGGCGTGGCTTCTGGTGCCTGGGCGGTAAAGCGGCAAAAAACTACCGTGAAAAGTCG 3232 Query 1223 GTCGATGTCGCCGGTTACGATGAACTGGCGGCATTCGATGAAGATATTGAGAAAGAGGGA 1282 || ||||| || ||||| |||||||| || || || ||||| |||||||| | || || Sbjct 3231 GTGGATGTGGCGGGTTATGATGAACTTGCTGCTTTTGATGATGATATTGAACAGGAAGGC 3172 Query 1283 TCCCCGACGTTCCTGGGTGATAAACGTATTGAGGGGTCTGTCTGGCCCAAATCTATTCGC 1342 || ||||||||||||||||| || |||||||| || || |||||||| || || || || Sbjct 3171 TCTCCGACGTTCCTGGGTGACAAGCGTATTGAAGGCTCGGTCTGGCCAAAGTCCATCCGT 3112 Query 1343 GGCTCAACGCCAAAAACAAAGGGGACCTGCCAGATTGAGCGTGCTGCCAGCGAGTCCGGG 1402 ||||| ||||||||| | || ||||| |||||||||||||| ||||| || ||| | Sbjct 3111 GGCTCCACGCCAAAAGTGAGAGGCACCTGTCAGATTGAGCGTGCAGCCAGTGAATCCCCG 3052 Query 1403 CATTTCATGCGTTTTCATGTTGCCTGTCCGCACTGTGGTGAAGAGCAGTACCTTAAATTC 1462 ||||| |||||||||||||||||||| ||||| || || || |||||||| |||||||| Sbjct 3051 CATTTTATGCGTTTTCATGTTGCCTGCCCGCATTGCGGGGAGGAGCAGTATCTTAAATTT 2992 Query 1463 GGCGACAAAGAGACCCCGTTCGGGCTGAAATGGACACCGGGCGAACCCTCCAGCGTCTTT 1522 |||||||||||||| ||||| || || |||||||| |||| || |||||||||| ||| Sbjct 2991 GGCGACAAAGAGACGCCGTTTGGCCTCAAATGGACGCCGGATGACCCCTCCAGCGCTTTT 2932 Query 1523 TACCTGTGTGAACATAATGCCTGCGTCATTAAGCAGCAGGAGCTGGATTTCACTGAAGCT 1582 || | || || ||||||||||||||||| |||||||||||||| || ||||| || Sbjct 2931 TAACACTGCGAGCATAATGCCTGCGTCATCCGCCAGCAGGAGCTGGACTTTACTGATGCC 2872 Query 1583 CGTTACATCTGCGACACCACCGGGATCTGGACGCGCGACGGTTTATCCTGGTTTTCATCA 1642 ||||| |||||||| | |||||||||||||| || || || | ||||||||| ||| Sbjct 2871 CGTTATATCTGCGAAAAGACCGGGATCTGGACCCGTGATGGCATTCTCTGGTTTTCGTCA 2812 Query 1643 ACAGGCACCGAAATCGACCCGCCAGACAGCGTGACGTTTCACATCTGGACGGCATACAGC 1702 | || || || || || || ||||| ||||| |||||||||||||| || |||||| Sbjct 2811 TCCGGTGAAGAGATTGAGCCACCTGACAGTGTGACCTTTCACATCTGGACAGCGTACAGC 2752 Query 1703 CCGTTTACCACCTGGGTTCAGATCGTTAAAGACTGGCTAAAAACGAAAGGGGATACAGGA 1762 ||||| ||||||||||| ||||| || ||||||||| | |||||||| |||||||| ||| Sbjct 2751 CCGTTCACCACCTGGGTGCAGATTGTCAAAGACTGGATGAAAACGAA-GGGGATACGGGA 2693 Query 1763 AAGCGTAAAACCTTCGTGAACACCACTCTGGGCGAAACATGGGAGCCTAAAATTGGTGAA 1822 || |||||||||||||| |||||||| || || || || |||||| | |||||||| ||| Sbjct 2692 AAACGTAAAACCTTCGTAAACACCACGCTCGGTGAGACGTGGGAGGCGAAAATTGGCGAA 2633 Query 1823 CGGCCTGACGCGGAGCTCATGGCCGAACGCAAAGAG-----TTCTTCGGGGCATCCGTAC 1877 || || || || || | ||||| || || |||||| ||| ||||| | | Sbjct 2632 CGTCCGGATGCTGAAGTGATGGCAGAGCGGAAAGAGCATTATTCAGCGGGG-----GGGC 2578 Query 1878 CGGAGCGTGTTGCTTATCTGACAGCCGGGATCGACTCCCAACTGGATCGATATGAAATGC 1937 | || ||||| ||||| ||||| ||||| ||||||||||| ||||| || || ||||||| Sbjct 2577 CTGACCGTGTGGCTTACCTGACCGCCGGTATCGACTCCCAGCTGGACCGCTACGAAATGC 2518 Query 1938 GCGTCTGGGGATGGGGGCCCGGTGAGGAAAGCTGGCTGATTGACCGGCAGATCATTATGG 1997 |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 2517 GCGTATGGGGATGGGGGCCGGGTGAGGAAAGCTGGCTGATTGACCGGCAGATTATTATGG 2458 Query 1998 GCCGTCATGATGATGAAGCGACCCTCGTCAGGGTGGACGAGGCGATTAACAAAACCTATC 2057 |||| || || |||||| ||| || | | ||||| ||||| || || ||||||||| Sbjct 2457 GCCGCCACGACGATGAACAGACGCTGCTGCGTGTGGATGAGGCCATCAATAAAACCTATA 2398 Query 2058 TCCGAAAGAATGGCGTGGAAATGTCGGTATCCCGTATCTGCTGGGATATCGGCGGTATTG 2117 ||| |||||| | ||||||| | |||||||||||||||||| ||||| |||| Sbjct 2397 CCCGCCGGAATGGTGCAGAAATGTGGAGGGCCCGTATCTGCTGGGATACTGGCGGGATTG 2338 Query 2118 ACCCCACCATCGTCTACAACCGCTCaaaaaaaCACGGTCTGTTTCGTGTGATCCCTATAA 2177 |||| ||||| || || | ||||| |||||||| || ||||| || |||||||| || | Sbjct 2337 ACCCGACCATTGTGTATGAACGCTCGAAAAAACATGGGCTGTTCCGGGTGATCCCCATTA 2278 Query 2178 AGGGGGCGTCGGTTTATGGAAAGCCGGTGGCGAACATGCCACGCAAGCGTAACAAGAATG 2237 | ||||| || || || |||||||||||||| | ||||||||| ||||| ||||| || | Sbjct 2277 AAGGGGCATCCGTCTACGGAAAGCCGGTGGCCAGCATGCCACGTAAGCGAAACAAAAACG 2218 Query 2238 GTGTTTACCTCACAGAGGTAGGAACAGACACCGCAAAAGAGCAGATTTATAACCGTTTCA 2297 | |||||||| || || | || || || ||||| |||||||||||||||||||| |||| Sbjct 2217 GGGTTTACCTTACCGAAATCGGTACGGATACCGCGAAAGAGCAGATTTATAACCGCTTCA 2158 Query 2298 CGCTGGTGGCGCAAAGAGACGAGCCGCTGGCGGGAGCGGTTCATTTCCCGAATAACCCAG 2357 | ||| | || || | || || ||||| | || || ||||| |||||||||||||| | Sbjct 2157 CACTGACGCCGGAAGGGGATGAACCGCTTCCCGGTGCCGTTCACTTCCCGAATAACCCGG 2098 Query 2358 AAATCTACGATCTAACAGAGGCCCAACAACTAACAGCTGAAGAGCAGGTGGAAAAATGGG 2417 | || | ||||| || || || || || || || |||||||||||||| |||||||||| Sbjct 2097 ATATTTTTGATCTGACCGAAGCGCAGCAGCTGACTGCTGAAGAGCAGGTCGAAAAATGGG 2038 Query 2418 TAGACGGAAAGAAAAAGATCGTCTGGGACAGCAAAAAACGACGAAATGAGGCGCTCGATT 2477 | || || | |||||| || | |||||||||||||| ||||| |||||||| ||||| | Sbjct 2037 TGGATGGCAGGAAAAAAATACTGTGGGACAGCAAAAAGCGACGCAATGAGGCACTCGACT 1978 Query 2478 GCTTTGTTTATGCACTGGCGGCGCTGCGTATAAGCATATCCCGCTGGCAGCTTAACCTTG 2537 |||| |||||||| |||||||||||||| || || || |||||||||||||| | || Sbjct 1977 GCTTCGTTTATGCGCTGGCGGCGCTGCGCATCAGTATTTCCCGCTGGCAGCTGGATCTCA 1918 Query 2538 ATTCACTTCTTGCCAGCCTGCTGGAGGAAGAAGGCACCCGTAACAATAACAAGACCCTGG 2597 | | || || || ||||||| ||| || || || | | ||| || || || |||| Sbjct 1917 GTGCGCTGCTGGCGAGCCTGCAGGAAGAGGATGGTGCAGCAACCAACAAGAAAACACTGG 1858 Query 2598 CGGATTACGCGCGGGCATTGTCTGGAGAGGAATAATGGCAACACAGACTGAACTGGATGC 2657 | |||||||| || || || || |||||||| |||| | |||| ||||| | || Sbjct 1857 CAGATTACGCCCGTGCCTTATCCGGAGAGGATGAATGACGCGACAGGAAGAACTTGCCGC 1798 Query 2658 CGCGCGCGCTGCGTTACATGACCTGATGATGGGAAAGCGCGTGGCGACGGTACAGAAAGA 2717 || || || || | ||||||||||||| || || || ||||| || ||||||||||| Sbjct 1797 TGCCCGTGCGGCACTGCATGACCTGATGACAGGTAAACGGGTGGCAACAGTACAGAAAGA 1738 Query 2718 CGGTCGAAGAGTGGAATTTACAGCTACCTCAGTCACCGATCTCAAAAAGTATATTGCTGA 2777 ||| ||||| ||||| ||||| || || || || | || || ||||| |||||||| || Sbjct 1737 CGGACGAAGGGTGGAGTTTACGGCCACTTCCGTGTCTGACCTGAAAAAATATATTGCAGA 1678 Query 2778 CCTTGAATCTCAGGTTGGTACCACATCACGACGCCAGGGGCCTGCAAGGTTTTACGTATG 2837 || ||| ||| || | ||| |||||| ||| |||||| | ||||| ||||| Sbjct 1677 GCTGGAAGTGCAGACCGGCATGACACAGCGACGCAGGGGACCTGCAGGATTTTATGTATG 1618 Query 2838 AAAAT----ACCAT-----CTTTAGTGGGTCCTGACGGGAAAACATCCCTCCGGGAATAC 2888 |||| ||||| | | |||| || ||||| | ||||| || || ||||| Sbjct 1617 AAAACGCCCACCATTCCCACCCTTCTGGGGCCGGACGGCATGACATCGCTGCGCGAATAT 1558 Query 2889 GCGGGGTATCATGGCGGCGGCGGAGGGTTTGGTGGTCAGTTGCGGGGCTGGAATCCACCA 2948 || || ||||| ||||| ||| | || ||||| || ||||||||| ||||| ||||| Sbjct 1557 GCCGGTTATCACGGCGGTGGCAGCGGATTTGGAGGGCAGTTGCGGTCGTGGAACCCACCG 1498 Query 2949 AGCGAAAGTGCTGATGCGGCTCTTCTGCCTAACTTCTCGCGCGGAAATGCCCGTGCTGAC 3008 || ||||||| ||||| || || |||| ||||| | || || |||||||| || ||| Sbjct 1497 AGTGAAAGTGTGGATGCAGCCCTGTTGCCCAACTTTACCCGTGGCAATGCCCGCGCAGAC 1438 Query 3009 GATCTGGTCAGAAATAATGGCTATGCGGCAAACGCCGTGCAGCTCCACCAGGACCACATC 3068 |||||||| | ||||| |||||||| || |||||| | ||||| || ||||| || ||| Sbjct 1437 GATCTGGTACGCAATAACGGCTATGCCGCCAACGCCATCCAGCTGCATCAGGATCATATC 1378 Query 3069 GTCGGGTCATTTTTCAGACTCAGCTATCGACCGAGCTGGCGCTATCTTGGCATCAATGAG 3128 |||||||| |||||| | ||||| |||| || |||||||||||||| |||||| ||| Sbjct 1377 GTCGGGTCTTTTTTCCGGCTCAGTCATCGCCCAAGCTGGCGCTATCTGGGCATCGGGGAG 1318 Query 3129 GAGGATTCACGCGCATTTTCGCGGGATGTAGAAGCCGCCTGGAACGAGTATGCCGAGGAC 3188 || || | || || ||||| || || || ||||| || ||||| |||| ||||||||| Sbjct 1317 GAAGAAGCCCGTGCCTTTTCCCGCGAGGTTGAAGCGGCATGGAAAGAGTTTGCCGAGGAT 1258 Query 3189 GACTTTTGCGGGATTGATGCCGAGCGTAAGCGAACGTTTACGATGATGATCCGAGAAGGT 3248 |||| ||| | ||||| | ||||| || || |||||||| |||||||| || |||||| Sbjct 1257 GACTGCTGCTGCATTGACGTTGAGCGAAAACGCACGTTTACCATGATGATTCGGGAAGGT 1198 Query 3249 GTGGCCATGCACGCGTTTAACGGTGAATTATGCACGCAGGCGACCTGGGACAGCGATTCA 3308 |||||||||||||| |||||||||||| | | | ||||| |||||||| | | ||| Sbjct 1197 GTGGCCATGCACGCCTTTAACGGTGAACTGTTCGTTCAGGCCACCTGGGATACCAGTTCG 1138 Query 3309 ACGCGTCTTTTCCGTACTCAGTTCAAAATGGTCAGTCCGAAGCGCGTCAGCAATCCGAAT 3368 |||| |||||||| || |||||| |||||||| ||||||||| ||||||| ||||| Sbjct 1137 TCGCGGCTTTTCCGGACACAGTTCCGGATGGTCAGCCCGAAGCGCATCAGCAACCCGAAC 1078 Query 3369 AATATCGGTGATACCCGGAACTGTCGCGCCGGTGTGAAAATAAATGATAGCGGTGCTGCG 3428 |||| ||| || | ||||||||| || ||||||||| | || ||||| |||||||| ||| Sbjct 1077 AATACCGGCGACAGCCGGAACTGCCGTGCCGGTGTGCAGATTAATGACAGCGGTGCGGCG 1018 Query 3429 CTGGGATATTACGTCAGCGACGATGGTTATCCCGGCTGGATGGCGCAGAACTGGACCTAC 3488 |||||||||||||||||||| || || ||||| ||||||||| ||||||| ||||| | Sbjct 1017 CTGGGATATTACGTCAGCGAGGACGGGTATCCTGGCTGGATGCCGCAGAAATGGACATGG 958 Query 3489 ATTCCTCGCGAACTACCCGGCGGTCGACCTTCATTTATCCATGTATTCGAACCGATGGAG 3548 || || || || |||||||||| || | || || || || || || ||||| ||||| Sbjct 957 ATACCCCGTGAGTTACCCGGCGGGCGCGCCTCGTTCATTCACGTTTTTGAACCCGTGGAG 898 Query 3549 GATGGACAGACCCGTGGGGCCAATGCGTTTTACAGCGTGATGGAGCAGATGAAAATGCTC 3608 || || ||||| || || || |||| ||||||||||||||||||||||||||| |||||| Sbjct 897 GACGGGCAGACTCGCGGTGCAAATGTGTTTTACAGCGTGATGGAGCAGATGAAGATGCTC 838 Query 3609 GATACCCTGCAAAATACCCAGCTCCAGAGCGCGATAGTGAAGGCTATGTATGCCGCTACC 3668 || || ||||| || || ||||| |||||||| || |||||||| ||||||||||| ||| Sbjct 837 GACACGCTGCAGAACACGCAGCTGCAGAGCGCCATTGTGAAGGCGATGTATGCCGCCACC 778 Query 3669 ATCGAGAGTGAACTGGATACCCAATCGGCGATGGACTTTATTCTCGGCGCGGATAATAAA 3728 || |||||||| |||||||| || || |||||||| |||||||| |||||| | | | | Sbjct 777 ATTGAGAGTGAGCTGGATACGCAGTCAGCGATGGATTTTATTCTGGGCGCGAACAGTCAG 718 Query 3729 GAGCAGCAGAGCAAACTTACGGGCTGGCTCGGTGAAATGGCGTCCTATTACTCAGCTGCG 3788 ||||||| | | || || |||||| | |||||||| || | |||||| | || ||| Sbjct 717 GAGCAGCGGGAAAGGCTGACCGGCTGGATTGGTGAAATTGCCGCGTATTACGCCGCAGCG 658 Query 3789 CCTGTTCGCCTGGGTGGGGCAAGGGTTCCACACCTGTTGCCGGGTGATTCTCTCAACCTT 3848 || || || ||||| || |||| || || |||||| |||||||||| || || ||||| Sbjct 657 CCGGTCCGGCTGGGAGGCGCAAAAGTACCGCACCTGATGCCGGGTGACTCACTGAACCTG 598 Query 3849 CAGTCGGCGCAGGATACCGATAACGGCTACTCGACTTTTGAACAGTCCCTGCTGCGTTAT 3908 ||| |||| |||||||| |||||||||||||| ||||| ||||| |||||||| ||| Sbjct 597 CAGACGGCTCAGGATACGGATAACGGCTACTCCGTGTTTGAGCAGTCACTGCTGCGGTAT 538 Query 3909 ATTGCCGCTGGGCTTGGTGTGTCGTATGAGCAGCTTTCGCGAAACTATTCGCAGATGAGC 3968 || || || ||||| ||||| ||||||||||||||||| || || || | ||||||||| Sbjct 537 ATCGCTGCCGGGCTGGGTGTCTCGTATGAGCAGCTTTCCCGGAATTACGCCCAGATGAGC 478 Query 3969 TACTCGACCGCACGCGCAAGTGCTAACGAGTCCTGGGCGTACTTTATGGGGCGTCGCAAG 4028 ||||| || ||||| || ||||| |||||||| |||||||||||||||||||| || || Sbjct 477 TACTCCACGGCACGGGCCAGTGCGAACGAGTCGTGGGCGTACTTTATGGGGCGGCGAAAA 418 Query 4029 TTTGTGGCATCCCGACAGGCCTGTCAGATGTTTCTTTGCTGGCTTGAAGAGGCGATTGTC 4088 || || |||||||| ||||| | ||||||||||| |||||||| |||||||| || || Sbjct 417 TTCGTCGCATCCCGTCAGGCGAGCCAGATGTTTCTGTGCTGGCTGGAAGAGGCCATCGTT 358 Query 4089 CGCCGCGTGGTCACGCTTCCTTCGAAAGCCCGGTTCAGTTTCCAGGAGGCGAGAACAGCC 4148 ||||||||||| ||| | ||||| ||||| || |||||||| ||||| || | | ||| Sbjct 357 CGCCGCGTGGTGACGTTACCTTCAAAAGCGCGCTTCAGTTTTCAGGAAGCCCGCAGTGCC 298 Query 4149 TGGGGGAATGCCAACTGGATTGGCTCTGGTCGAATGGCAATTGACGGGCTGAAAGAGGTA 4208 |||||||| | ||||||| ||||| ||||| ||||| || || || |||||||| || Sbjct 297 TGGGGGAACTGCGACTGGATAGGCTCCGGTCGTATGGCCATCGATGGTCTGAAAGAAGTT 238 Query 4209 CAGGAGGCCGTCATGCTCATTGAGGCAGGTCTCAGCACGTATGAAAAAGAGTGCGCCAAA 4268 ||||| || || ||||| || || || || || || || || || ||||||||||| ||| Sbjct 237 CAGGAAGCGGTGATGCTGATAGAAGCCGGACTGAGTACCTACGAGAAAGAGTGCGCAAAA 178 Query 4269 CGCGGTGATGATTATCAGGAGATTTTTGCCCAGCAGGTCCGGGAAACCATGGAGCGTCGT 4328 |||||||| || |||||||| |||||||||||||||||||| ||||| |||||||| ||| Sbjct 177 CGCGGTGACGACTATCAGGAAATTTTTGCCCAGCAGGTCCGTGAAACGATGGAGCGCCGT 118 Query 4329 GCTGCGGGTCTGAAACCACCGGCATGGGCCGCTGCAGCTTTTGAGGCCGGAGTGAAAAAA 4388 || || ||||| ||||| || || ||||| |||||||| ||||| |||| || | || Sbjct 117 GCAGCCGGTCTTAAACCGCCCGCCTGGGCGGCTGCAGCATTTGAATCCGGGCTGCGACAA 58 Query 4389 TCAAACGAGGAGGAGCAAGA-TGGC-GCACGAGCTGCGTAATCTTCCGCATATTGCCAG 4445 |||| ||||||||| |||| || | ||| ||||||||| |||| ||||||| |||||| Sbjct 57 TCAACAGAGGAGGAG-AAGAGTGACAGCA-GAGCTGCGT-ATCTCCCGCATA-TGCCAG 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147480487689216