Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq32376 109 4e-19 seq14423 104 2e-17 seq14855 96.9 3e-15 seq40108 95.1 1e-14 seq41040 91.5 1e-13 >seq32376 Length=6472 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||||||||| || || ||||| || || ||||| | || ||| | Sbjct 311 ATGCAAATTTTTGTCAAGACCTTGACAGGAAAGACAATTACTTTGGAGGTGGAAAGTTCA 252 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | || ||| ||||||| ||||| || ||| | || |||||| Sbjct 251 GATACTATTGATAATGTGAAAGCAAAGATTCAGGATAAGGAGGGCATCCCGCCAGATCAG 192 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| || || ||||| || || | | ||| | || || || ||| Sbjct 191 CAGAGGCTTATCTTTGCCGGGAAGCAGCTTGAAGATGGTAGAACTCTTGCTGATTATAAC 132 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||||| ||||||||||| ||||| |||| ||| Sbjct 131 ATTCAGAAGGAGTCTACTTTGCATTTGGTCTTG 99 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| ||||| || || |||||||| ||| | || || | Sbjct 767 ATGCAGATCTTTGTCAAGACTTTGACTGGGAAAACCATCACCCTTGAGGTCGAATCCTCA 708 Query 107616 GATACTGTCGGCCAGGTAAA-ACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || || ||| ||| || ||||| || | || ||||| Sbjct 707 GATACCATTGACAATGTGAAGACGAAA-ATTCAGGACAAAGAGGGTATCCCTCCAGATCA 649 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| ||||||| ||| || ||||| || || || | | || |||| || ||||| Sbjct 648 ACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGAAGGACCTTGGCTGATTACAA 589 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || ||||||||||| | || ||||| || ||||| |||| || Sbjct 588 CATCCAGAAGGAGTCTACCCTTCATTTGGTGCTGCGATTGAGAGGTGG 541 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||||||||||||||| || || ||||| || || || || | || || ||| Sbjct 539 ATGCAAATTTTTGTCAAGACCTTGACAGGAAAGACAATAACTTTGGAGGTTGAAAGCTCA 480 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || ||| |||||| || || || ||| | || ||||| Sbjct 479 -GATACTATTGATAATGTGAAATCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGATCA 421 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||||| ||| || ||||| || || || | | || |||| || ||||| Sbjct 420 GCAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGAAGGACCTTGGCTGATTACAA 361 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || |||||||| || | || ||||| || || || |||| || Sbjct 360 CATCCAGAAGGAGTCCACCCTACATTTGGTGCTGCGACTGAGAGGTGG 313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| |||||| ||||||| || ||||| ||| | || |||| | Sbjct 995 ATGCAGATCTTTGTGAAAACTCTAACAGGTAAGACCATCACCTTGGAGGTGGAGAGTTCG 936 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || ||| ||||| || || ||||| | || |||||| Sbjct 935 GATACCATTGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCAGATCAG 876 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||||| || | ||| || || || | ||||| | | || | || ||||||||| Sbjct 875 CAGAGACTCATCTTTGCTGGCAAGCAATTAGAGGATGGTCACACCCTTGCCGACTACAAC 816 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 || |||||||| || || ||||| Sbjct 815 ATCCAAAAGGAATCCACCCTGCAC 792 >seq14423 Length=23748 Score = 104 bits (114), Expect = 2e-17 Identities = 153/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||||||||||||||| || || ||||| || ||||| || | || |||| ||| Sbjct 12094 ATGCAAATTTTTGTCAAGACCTTGACAGGAAAGACCATAACTTTGGAGGTGGAGAGCTCA 12153 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| |||||| ||||| || ||| | || || || Sbjct 12154 -GATACCATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAGGGCATCCCACCAGACCA 12212 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| ||||| | ||| || |||||||| || || | | ||| | || || ||||| Sbjct 12213 GCAGAGGCTTATATTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCTGATTACAA 12272 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| ||||||||||| |||| |||| ||| Sbjct 12273 CATTCAGAAGGAGTCTACTCTGCATTTGGTCTTG 12306 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| |||||| | || ||||| ||||||||| | || ||| | Sbjct 11410 ATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATTACCCTTGAGGTGGAAAGTTCA 11469 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || ||| || || || || ||||| | || |||||| Sbjct 11470 GATACCATTGACAATGTTAAAGCGAAAATCCAAGACAAGGAAGGGATCCCACCTGATCAG 11529 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || || ||||| | ||| ||||| || ||||||| | || | || || |||||| Sbjct 11530 CAAAGGCTTATCTTTGCTGGTAAGCAATTGGAGGATGGTCGCACCCTTGCTGATTACAAC 11589 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||||||||||||||| Sbjct 11590 ATTCAAAAGGAGTCTAC 11606 >seq14855 Length=14869 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || || || || || || ||||| || | || ||| | Sbjct 12551 ATGCAAATTTTTGTGAAGACATTGACGGGGAAGACCATAACTCTGGAGGTTGAGAGTTCT 12492 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || ||| |||||| ||||| ||||| | || ||||||| Sbjct 12491 GATACAATTGACAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATCCCTCCGGATCAG 12432 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||| | ||| || || ||| |||| || | | ||| | | || || ||| Sbjct 12431 CAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGAAGAACCCTTTCAGATTATAAC 12372 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 || || ||||||||||| ||||| |||| ||| Sbjct 12371 ATCCAGAAGGAGTCTACACTGCACTTGGTTTTG 12339 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| |||||||| || | | ||||| || ||||| || | ||| |||| | Sbjct 13007 ATGCAGATTTTTGTTAAGGCCCTGACAGGGAAGACCATAACATTGGAAGTGGAGAGTTCA 12948 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | ||||| |||||| || || || ||| | || ||| ||| Sbjct 12947 GACACCATTGATAATGTAAAGGCTAAGATTCAGGACAAGGAGGGCATCCCTCCGGACCAG 12888 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | || || ||||| || ||||| | | || | || ||||| ||| Sbjct 12887 CAGAGGCTCATCTTCGCTGGGAAACAACTTGAGGATGGAAGGACCCTTGCTGACTATAAC 12828 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||||||||| ||||| ||||| || ||||| |||| || Sbjct 12827 ATCCAGAAGGAGTCTACCCTGCACTTGGTGCTGCGATTGAGAGGTGG 12781 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || || ||||| |||||||| ||| |||| || | Sbjct 13235 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAAACCATCACCCTCGAGGTTGAATCCTCA 13176 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | || || ||||| || ||||| || | || ||||||| Sbjct 13175 GACACTATCGATAATGTCAAGGCGAAGATCCAAGACAAAGAGGGTATTCCTCCGGATCAG 13116 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || || | |||| ||| || || ||||||||||| | | || | || || |||||| Sbjct 13115 CAAAGGTTGATTTTTGCTGGGAAGCAGCTGGAGGATGGAAGGACCCTTGCTGATTACAAC 13056 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||| ||||| | || ||||| | ||||| |||| || Sbjct 13055 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGG 13009 >seq40108 Length=192235 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||||||||||||||| || |||||||| || ||||||||| | || ||| ||| Sbjct 160775 ATGCAAATTTTTGTCAAGACCTTAACAGGAAAGACCATTACCTTAGAGGTGGAAAGCTCT 160834 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| |||||| || || || || | ||| || || Sbjct 160835 -GATACGATTGATAATGTGAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 160893 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| ||||||||| || ||||| ||| |||| || | ||| |||| || ||||| Sbjct 160894 GCAGCGACTTATTTTCGCTGGTAAGCAGTTGGAAGATGGACGTACACTGGCAGATTACAA 160953 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 ||||||||||| || || |||| Sbjct 160954 TATTCAAAAGGAATCCACTCTGCA 160977 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||||||||| || || || ||||| || || || || | || ||| ||| Sbjct 160547 ATGCAAATTTTTGTGAAGACCTTGACAGGAAAGACAATAACGTTGGAGGTGGAAAGCTCA 160606 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | || ||| |||||| || || || ||| | || || || Sbjct 160607 -GATACTATTGATAATGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCA 160665 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| || || | ||| || |||||||| || || | | ||| | || || || || Sbjct 160666 GCAGAGGCTCATCTTTGCTGGAAAACAGCTTGAAGATGGAAGAACCCTTGCTGATTATAA 160725 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||| ||||||||||| |||| |||||||| Sbjct 160726 CATTCAGAAGGAGTCTACTCTGCATTTGGTGTTG 160759 >seq41040 Length=490441 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| || || || || || || ||||| ||| | || |||| ||| Sbjct 179429 AATGCAGATCTTTGTGAAGACATTGACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTC 179370 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 || || | | | | || || |||||| || ||||| ||| | || || | Sbjct 179369 T-GACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCAGACC 179311 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| || || | || || |||||||| ||||| | || |||| |||| || |||| Sbjct 179310 AGCAGAGGCTCATATTCGCTGGCAAACAGCTTGAGGATGACAGAACATTGGCTGATTACA 179251 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||| || ||||| || | ||| | |||||| || | || || || Sbjct 179250 ACATTCAGAAAGAGTCCACCCTCCACCTTGTGTTGCGACTCCGTGGTGG 179202 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || | || || || ||||| ||| | || |||| | Sbjct 178516 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 178457 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || || ||| || ||||||||| | || || || Sbjct 178456 GACACCATCGACAACGTGAAGGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGACCAA 178397 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || |||||||| ||||| | || ||| |||| || |||||| Sbjct 178396 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTGGCTGATTACAAC 178337 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||| || ||||| || Sbjct 178336 ATTCAGAAAGAGTCCAC 178320 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| || | || ||||| ||||| || ||||| ||| | Sbjct 179656 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 179597 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || || ||| ||||| ||||| | || ||| ||| Sbjct 179596 GATACCATAGACAATGTGAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCGGACCAG 179537 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| ||| || || ||||||||||| | || | || || |||||| Sbjct 179536 CAGCGTCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACAAC 179477 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || ||||||||||| || | || ||||| Sbjct 179476 ATCCAAAAGGAGTCCACCCTCCATTTGGTG 179447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398660646667696