Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq39663 107 2e-18 seq32376 96.9 3e-15 seq40108 89.7 5e-13 seq41040 82.4 7e-11 seq14423 82.4 7e-11 seq7383 82.4 7e-11 >seq39663 Length=443811 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || |||| || |||| ||| ||||||| || || || || || |||||||||||| Sbjct 345258 CCGCCTCTCAATCGCAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCGGCG 345317 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || || || |||||||||||||||||| | ||||| | ||||||||| || || Sbjct 345318 AGGGTCCTTCCATCCTCGAGTTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGG 345377 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 ||||| |||||||| || || || | | || | ||||||| || ||| || Sbjct 345378 ATGCCCTCTTTGTCCTGGATCTTCGCCTTCACATTATCAATGGTGTCTGAGGATTCCACC 345437 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | || || || |||||||| || || || || ||||| Sbjct 345438 TCGAGGGTGATTGTTTTACCCGTCAATGTCTTGACAAAGATCTGCAT 345484 >seq32376 Length=6472 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| || |||| || ||||||| ||||| || || || ||||||||||| Sbjct 540 GCCACCTCTCAATCGCAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGC 599 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || ||||| |||||||| |||||| | || || | || ||||| ||||| Sbjct 600 CAAGGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGATCTGGAGG 659 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || || |||||||| |||||| || | | || | || |||| || ||| || Sbjct 660 GATACCCTCTTTGTCCTGAATTTTCGTCTTCACATTGTCAATGGTATCTGAGGATTCGAC 719 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| || | || || || ||||| || || || || || ||||| Sbjct 720 CTCAAGGGTGATGGTTTTCCCAGTCAAAGTCTTGACAAAGATCTGCAT 767 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| | |||| || ||||| | || || || || || ||||||||||| Sbjct 312 GCCACCTCTCAGTCGCAGCACCAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATCAGC 371 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || || ||||| |||||||| |||||| | || || | |||||||| || || Sbjct 372 CAAGGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGCGG 431 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||||| || ||||| ||| || ||| | | || | || |||| | ||| || Sbjct 432 GATGCCCTCCTTGTCCTGAATCTTGGATTTCACATTATCAATAGTATCTGAGCTTTCAAC 491 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | ||| | ||||| || ||||| || || || || |||||||| Sbjct 492 CTCCAAAGTTATTGTCTTTCCTGTCAAGGTCTTGACAAAAATTTGCAT 539 >seq40108 Length=192235 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| |||| || || | ||| ||||||| || || || || || ||||||||||| Sbjct 160546 GCCGCCTCTCAATCGAAGAACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGC 160487 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 || || ||| || || |||||||| |||||| | || || | ||||| ||||| || Sbjct 160486 CAAGGTCCTCCCATCCTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGCTGGTCGGGTGG 160427 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 ||| || |||||||| || || || | | || | ||||||| || ||| || Sbjct 160426 TATACCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATGGTGTCTGAGGATTCGAC 160367 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 || | || | || || || ||||| || || || || || |||||| Sbjct 160366 CTCGAGGGTGATGGTTTTCCCTGTCAAGGTCTTGACAAAGATCTGCATA 160318 >seq41040 Length=490441 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 || || ||||| || |||||||| ||| || || || ||||| || ||||||||| Sbjct 179004 GTGGACTCTTTCTGAATGTTGTAGTCGGCCAAGGTTCTGCCATCTTCAAGCTGTTTACCA 179063 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| |||| || | || || || || || ||||| |||||||| |||||| || Sbjct 179064 GCAAAGATGAGCCTCTGTTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATTTTGGCCTTC 179123 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||||||| | ||||| || | ||| | |||||||| || | || Sbjct 179124 ACATTGTCAATTGTGTCTGAGCTCTCTACCTCCAAAGTAATTGTCTTGCCAGTAAGGGTC 179183 Query 137395 TTTACGAATATTTGCATA 137412 || || || || |||||| Sbjct 179184 TTCACAAAAATCTGCATA 179201 >seq14423 Length=23748 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 137209 TGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGT 137268 |||| ||||| || ||||| ||||||||||| | |||| || || | ||| Sbjct 11612 TGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTGCGACCATCCTCCAATTGC 11553 Query 137269 TTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTT 137328 ||||||||| |||| || | ||||||||| || || || ||||| ||||| ||||| Sbjct 11552 TTACCAGCAAAGATAAGCCTTTGCTGATCAGGTGGGATCCCTTCCTTGTCTTGGATTTTC 11493 Query 137329 TGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTC 137388 ||| | | || | || |||| ||| || |||| || | ||||||||||| Sbjct 11492 GCTTTAACATTGTCAATGGTATCTGAACTTTCCACCTCAAGGGTAATGGTCTTGCCGGTG 11433 Query 137389 AATGTTTTTACGAATATTTGCAT 137411 | ||||| || || || ||||| Sbjct 11432 AGAGTTTTCACAAAAATCTGCAT 11410 >seq7383 Length=6982 Score = 82.4 bits (90), Expect = 7e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 137258 ||| || ||||||| || ||||| ||||||||||| ||||| | |||| || Sbjct 925 CAAGACCAAATGAAGAGTCGATTCCTTTTGTATGTTATAATCAGCAAGAGTGCGGCCATC 866 Query 137259 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 137318 ||| || || ||||| ||| | |||| | ||||||||| ||||| |||||||| ||||| Sbjct 865 TTCCAGCTGCTTACCGGCAAAAATCAACCTTTGCTGATCCGGAGGGATGCCTTCCTTGTC 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488272467244800