Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04]
44,464 sequences; 394,454,697 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq32376 190 4e-43
seq14855 190 4e-43
seq39663 187 5e-42
seq40108 185 2e-41
seq14423 176 9e-39
seq41040 150 4e-31
seq42027 100 6e-16
seq38694 98.7 2e-15
>seq32376
Length=6472
Score = 190 bits (210), Expect = 4e-43
Identities = 171/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || |||| |||||| || ||||| || |||||||||| ||| |||||||
Sbjct 97 CGCAAGACCAAATGCAAAGTAGACTCCTTCTGAATGTTATAATCAGCAAGAGTTCTACCA 156
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || || |||||||| || || || |||||||| || || || ||||||
Sbjct 157 TCTTCAAGCTGCTTCCCGGCAAAGATAAGCCTCTGCTGATCTGGCGGGATGCCCTCCTTA 216
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||||||||| ||||| ||||| ||||| | ||| || |||||||| ||
Sbjct 217 TCCTGAATCTTTGCTTTCACATTATCAATAGTATCTGAACTTTCCACCTCCAAAGTAATT 276
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| || |||||
Sbjct 277 GTCTTTCCTGTCAAGGTCTTGACAAAAATTTGCAT 311
Score = 170 bits (188), Expect = 4e-37
Identities = 176/228 (77%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| ||||||| ||||| || || || || || || || ||||| || || |||||||
Sbjct 313 CCACCTCTCAGTCGCAGCACCAAATGTAGGGTGGACTCCTTCTGGATGTTGTAATCAGCC 372
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || ||||| |||||||| |||||||| || || || || |||||||| ||
Sbjct 373 AAGGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGCTGATCTGGCGGG 432
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTT-CTAC 82762
|| || ||||| || |||||||| | ||| ||||| ||||| ||||| | || || | ||
Sbjct 433 ATGCCCTCCTTGTCCTGAATCTTGGATTTCACATTATCAATAGTATC-TGAGCTTTCAAC 491
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| ||||| |||||||| ||||| ||||| || |||||
Sbjct 492 CTCCAAAGTTATTGTCTTTCCTGTCAAGGTCTTGACAAAAATTTGCAT 539
Score = 156 bits (172), Expect = 8e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| |||||||| ||||| || || || || ||||| || ||||| || || |||||||
Sbjct 541 CCACCTCTCAATCGCAGCACCAAATGAAGGGTAGACTCCTTCTGGATGTTGTAATCAGCC 600
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
| | || || ||||| |||||||| |||||||| || || || ||||||||||||||
Sbjct 601 AAGGTCCTTCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGCCTCTGTTGATCTGGAGGG 660
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGG-TTCTAC 82762
|| || || || || ||||| || | || ||||| ||||| ||||| | ||| ||| ||
Sbjct 661 ATACCCTCTTTGTCCTGAATTTTCGTCTTCACATTGTCAATGGTATC-TGAGGATTCGAC 719
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || || || || ||||| ||||| ||||| ||||||||
Sbjct 720 CTCAAGGGTGATGGTTTTCCCAGTCAAAGTCTTGACAAAGATCTGCAT 767
Score = 140 bits (154), Expect = 6e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | |||||| || ||||| || || || || || || | || | |||
Sbjct 781 CGTAGAACGAGGTGCAGGGTGGATTCCTTTTGGATGTTGTAGTCGGCAAGGGTGTGACCA 840
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| |||| ||| || ||||||||||| ||||| || |||||||| || || ||||||||
Sbjct 841 TCCTCTAATTGCTTGCCAGCAAAGATGAGTCTCTGCTGATCTGGTGGGATCCCTTCCTTG 900
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| ||||| ||||| || || ||||| ||||| | || || ||||| || ||
Sbjct 901 TCTTGGATCTTAGCTTTCACGTTGTCAATGGTATCCGAACTCTCCACCTCCAAGGTGATG 960
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||| | || || ||||| ||||||||
Sbjct 961 GTCTTACCTGTTAGAGTTTTCACAAAGATCTGCAT 995
>seq14855
Length=14869
Score = 190 bits (210), Expect = 4e-43
Identities = 171/215 (80%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| ||| |||||||| ||||| || ||||| || |||||||| || || |||| ||
Sbjct 12337 CGCAAAACCAAGTGCAGTGTAGACTCCTTCTGGATGTTATAATCTGAAAGGGTTCTTCCA 12396
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| | || || ||||||||||| ||||| || ||||| ||||| || |||||||||
Sbjct 12397 TCTTCCAACTGCTTCCCAGCAAAGATAAGTCTCTGCTGATCCGGAGGGATACCTTCCTTA 12456
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| ||||| ||||| ||||| |||||| | || || |||| ||||||
Sbjct 12457 TCCTGAATCTTAGCTTTCACATTGTCAATTGTATCAGAACTCTCAACCTCCAGAGTTATG 12516
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || ||||| ||||| ||||| || |||||
Sbjct 12517 GTCTTCCCCGTCAATGTCTTCACAAAAATTTGCAT 12551
Score = 168 bits (186), Expect = 1e-36
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||| ||| ||||| || |||||||| ||| | || ||||| |||| || |||| ||
Sbjct 12564 ACGCAAAACCAAGTGAAGGGTAGATTCCTTCGGGATGTTATAGTCAGCCAGGGTTCTTCC 12623
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| | || || ||||||||||| || || || || ||||| || || || |||||
Sbjct 12624 ATCTTCCAACTGCTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATACCCTCCTT 12683
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| ||||| ||||| |||||||| || | || || |||||||| ||
Sbjct 12684 ATCCTGAATCTTAGCTTTGACATTATCAATCGTGTCTGAACTCTCAACCTCCAAAGTAAT 12743
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| ||||||| ||||| ||||| ||||||||
Sbjct 12744 GGTCTTTCCTGTCAGGGTCTTGACAAAAATCTGCAT 12779
Score = 154 bits (170), Expect = 3e-32
Identities = 163/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | ||||| || || || ||||| ||||||||||||| ||| | | ||
Sbjct 12109 CGCAGGACAAGATGCAGGGTGGACTCCTTCTGAATATTATAATCAGCCAGAGTACGTCCA 12168
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || |||||||| || ||||| || || |||||||| || || |||||
Sbjct 12169 TCCTCCAACTGCTTGCCAGCAAAAATCAGTCTCTGCTGGTCTGGAGGAATACCCTCCTTG 12228
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| ||||| || || ||||| ||||| |||||| ||| || ||||| || ||
Sbjct 12229 TCTTGGATCTTCGCCTTAACATTGTCAATTGTATCAGAGCTTTCCACCTCCAATGTGATA 12288
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| || |||||
Sbjct 12289 GTCTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 12323
Score = 116 bits (128), Expect = 7e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || || | ||| ||||| | ||| || || || || || || || || || || |
Sbjct 13235 TACCACCCCTGAGACGAAGAACGAGGTGAAGGGTTGACTCCTTTTGGATGTTGTAGTCTG 13294
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | ||| || || | ||| || ||||||||||| | ||||| ||||| || |
Sbjct 13295 CAAGGGTGCGACCATCCTCCAATTGCTTCCCAGCAAAGATCAACCTTTGCTGATCAGGTG 13354
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || |||||||| ||||| ||||| ||||| || || ||||| ||||| | ||||
Sbjct 13355 GGATCCCTTCCTTGTCTTGGATCTTAGCTTTCACGTTGTCAATGGTATCTGAACTCTCTA 13414
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || | ||| || ||||| || || | || || || || || |||||
Sbjct 13415 CCTCGAGAGTGATTGTCTTCCCGGTTAGGGTTTTCACGAAGATTTGCAT 13463
>seq39663
Length=443811
Score = 187 bits (206), Expect = 5e-42
Identities = 171/216 (79%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||||||||| ||||| || ||||| || ||||| || |||||||||| || |||| ||
Sbjct 345041 ACGCAGAACCAAGTGTAGGGTAGACTCCTTCTGGATGTTATAATCAGCAAGGGTTCTTCC 345100
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || || ||||||||||| || || || || |||||||| || || |||||
Sbjct 345101 ATCTTCAAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCCTCCTT 345160
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| || || ||||| ||||| |||||| | || || |||||||| ||
Sbjct 345161 GTCCTGAATCTTCGCCTTCACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTGAT 345220
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| ||||||||
Sbjct 345221 GGTCTTCCCTGTCAAGGTCTTAACAAAAATCTGCAT 345256
Score = 172 bits (190), Expect = 1e-37
Identities = 167/215 (78%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| ||| |||||||| || || || ||||| ||||| ||||||| || | |||||
Sbjct 344814 CGCAAAACCAAGTGCAGGGTGGACTCCTTCTGGATATTGTAATCAGCCAGGGTCCTACCA 344873
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || || || ||||||||||| || || || || ||||| || || || ||||||
Sbjct 344874 TCTTCCAGCTGCTTCCCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGAATACCCTCCTTA 344933
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| ||||| ||||| ||||| |||||| | || || ||||| |||||
Sbjct 344934 TCCTGAATCTTAGCTTTCACATTATCAATAGTATCAGAACTCTCAACCTCCAATGTTATG 344993
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || ||||| ||||| || |||||
Sbjct 344994 GTCTTCCCGGTTAAAGTCTTAACAAAGATTTGCAT 345028
Score = 140 bits (154), Expect = 6e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
||||| || | ||||| || || || ||||| ||||||||||| | | | ||| |||
Sbjct 344586 CGCAGGACAAGATGCAGGGTGGACTCCTTCTGGATATTATAATCTGCCAAAGTTCGACCA 344645
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | || || |||||||| || |||| || || |||||||| || || || ||
Sbjct 344646 TCCTCCAACTGCTTGCCAGCAAAAATCAGTCGCTGCTGGTCTGGAGGAATACCCTCTTTG 344705
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| |||||||| || || ||||| ||||| ||||| ||| || ||||| || ||
Sbjct 344706 TCCTGAATCTTCGCCTTAACATTGTCAATTGTATCGGAGCTTTCCACCTCCAATGTAATG 344765
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| || |||||
Sbjct 344766 GTCTTCCCTGTCAAGGTCTTCACAAAGATTTGCAT 344800
Score = 131 bits (144), Expect = 3e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||| || || || || ||||| || || || || | || | | |||
Sbjct 345498 CGAAGAACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCTGCTAAGGTGCGACCA 345557
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| |||| ||| || ||||||||||| || ||||| ||||| || || || ||||||||
Sbjct 345558 TCCTCTAATTGCTTCCCAGCAAAGATAAGCCTTTGCTGATCAGGTGGGATCCCTTCCTTG 345617
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| ||||| ||||| ||||| ||||| ||||| | || || || | || ||
Sbjct 345618 TCTTGGATCTTGGCTTTAACATTGTCAATGGTATCTGAACTCTCCACCTCGAGGGTGATG 345677
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| ||||| || || || || || |||||
Sbjct 345678 GTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCAT 345712
>seq40108
Length=192235
Score = 185 bits (204), Expect = 2e-41
Identities = 172/216 (80%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || ||||||||||| || ||||| || |||||||||| || |||| ||
Sbjct 160761 CGCAACACCAAATGCAGAGTAGACTCCTTCTGAATGTTATAATCAGCAAGGGTTCTTCCA 160702
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||||||||||||||| || || || || ||||| || || || |||||
Sbjct 160701 TCTTCAAGCTGTTTTCCAGCAAAGATGAGCCTCTGCTGGTCTGGCGGGATGCCCTCCTTG 160642
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAG-GTTCTACTTCCAAAGTTAT 82774
|| |||||||| ||||| ||||| ||||| ||||| | || ||| || ||||| |||||
Sbjct 160641 TCCTGAATCTTGGCTTTCACATTATCAATAGTATC-TGAGCTTTCCACCTCCAACGTTAT 160583
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| || |||||
Sbjct 160582 TGTCTTTCCTGTCAAGGTCTTCACAAAAATTTGCAT 160547
Score = 147 bits (162), Expect = 4e-30
Identities = 170/229 (74%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || || | || ||||| | ||| || || || || ||||| || || || ||||
Sbjct 160319 TACCACCCCTGAGGCGGAGAACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 160260
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
|| | | ||| || |||| || || ||||||||||| || ||||| ||||| || |
Sbjct 160259 CAAGGGTGCGACCATCCTCTAACTGCTTGCCAGCAAAGATAAGCCTTTGCTGATCAGGTG 160200
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || ||||||||||| || ||||| ||||||||||| ||||| ||||| | || |
Sbjct 160199 GGATCCCTTCCTTATCCTGGATCTTGGCTTTTACATTATCAATGGTATCTGAACTCTCCA 160140
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| || || || || |||||||| |||| || || ||||| ||||||||
Sbjct 160139 CCTCTAAGGTGATGGTCTTGCCGGTCAGAGTTTTCACAAAGATCTGCAT 160091
Score = 132 bits (146), Expect = 9e-26
Identities = 151/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
|||||||| ||||| || || ||||| ||||| | || | | || ||||| | ||
Sbjct 160977 TGCAGAGTGGATTCCTTTTGAATATTGTAATCTGCCAGTGTACGTCCATCTTCCAACTGC 160918
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| ||||| || || |||| || || ||||| || || || ||||| || || ||||||
Sbjct 160917 TTACCAGCGAAAATAAGTCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTT 160858
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
||||| ||||| |||||||||||| ||| || || || || || ||||| |||||
Sbjct 160857 GCTTTCACATTATCAATCGTATCAGAGCTTTCCACCTCTAAGGTAATGGTCTTTCCTGTT 160798
Query 82788 AACGTCTTTACAAATATCTGCAT 82810
|| ||||| ||||| || |||||
Sbjct 160797 AAGGTCTTGACAAAAATTTGCAT 160775
>seq14423
Length=23748
Score = 176 bits (194), Expect = 9e-39
Identities = 170/216 (79%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| || || ||||||||||| || ||||| || || ||||||| || |||| ||
Sbjct 12308 CGCAAGACCAAATGCAGAGTAGACTCCTTCTGAATGTTGTAATCAGCAAGGGTTCTTCCA 12249
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| || ||||| || ||||| || || || || || ||||| || || || ||||||
Sbjct 12248 TCTTCAAGCTGTTTCCCGGCAAATATAAGCCTCTGCTGGTCTGGTGGGATGCCCTCCTTA 12189
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCTACTTCCAAAGTTAT 82774
|| |||||||| ||||| ||||| ||||| ||||| | || | || || |||||||||||
Sbjct 12188 TCCTGAATCTTAGCTTTCACATTATCAATGGTATC-TGAGCTCTCCACCTCCAAAGTTAT 12130
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| |||||||| ||||| ||||| || |||||
Sbjct 12129 GGTCTTTCCTGTCAAGGTCTTGACAAAAATTTGCAT 12094
Score = 149 bits (164), Expect = 1e-30
Identities = 162/215 (75%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|||| ||| ||||||||||| ||||| ||||| ||||||||||||| || | | ||
Sbjct 12536 CGCAAAACCAAGTGCAGAGTGGATTCCTTCTGGATATTATAATCAGCAAGGGTCCGCCCA 12477
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
||||| | || || ||||||||||| || || || || || || || || || || ||
Sbjct 12476 TCTTCCAACTGCTTGCCAGCAAAGATAAGCCTCTGCTGGTCCGGTGGGATACCCTCTTTG 12417
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| || || ||||| ||||| |||||| | || || ||||| || ||
Sbjct 12416 TCCTGGATCTTCGCCTTAACATTATCAATGGTATCAGAACTCTCAACCTCCAAGGTAATG 12357
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || || || ||||| ||||| ||||||||
Sbjct 12356 GTCTTCCCAGTTAAAGTCTTCACAAAAATCTGCAT 12322
Score = 143 bits (158), Expect = 5e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667
||||| || ||||| ||||| ||||| ||||| | | | | | || || || | |||
Sbjct 12752 TGCAGGGTGGATTCCTTCTGAATATTGTAATCTGCCAAAGTACGGCCATCCTCCAATTGC 12693
Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727
|| |||||||| || | || ||||| |||||||| || || ||||| || || |||||
Sbjct 12692 TTGCCAGCAAAAATCAATCGCTGTTGGTCTGGAGGAATACCCTCCTTGTCCTGGATCTTC 12633
Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787
||||| ||||| ||||| |||||| ||| || ||||| || || ||||| || |||
Sbjct 12632 GCTTTCACATTATCAATAGTATCAGAGCTTTCCACCTCCAAGGTAATAGTCTTTCCGGTC 12573
Query 82788 AACGTCTTTACAAATATCTGCATT 82811
| ||||| |||||||||||||||
Sbjct 12572 AGGGTCTTCACAAATATCTGCATT 12549
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| |||||||| || || || || || || || || || ||||| || || ||||||| |
Sbjct 11864 CCACCTCTCAATCGAAGCACCAAATGAAGGGTGGACTCCTTCTGGATGTTGTAATCAGCT 11805
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| | || || || || |||||||| |||||||| || | || || |||||||||||
Sbjct 11804 AGGGTCCTTCCATCCTCAAGTTGTTTCCCAGCAAAAATCAACCTCTGCTGATCTGGAGGG 11745
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763
|| || || ||||| || ||||| || || ||||| ||||| || || | || ||
Sbjct 11744 ATGCCCTCTTTATCCTGGATCTTCGCCTTGACATTGTCAATGGTGTCCGAGGACTCAACC 11685
Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || || || || ||||| ||||| ||||| ||||||||
Sbjct 11684 TCAAGGGTGATGGTTTTCCCAGTCAAAGTCTTAACAAAGATCTGCAT 11638
Score = 136 bits (150), Expect = 8e-27
Identities = 159/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| ||||| | ||| || ||||| || || || || || ||||||| || | | |||
Sbjct 11624 CGAAGAACAAGGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGCAAGGGTGCGACCA 11565
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || | ||| || ||||||||||| || ||||| ||||| || || || ||||||||
Sbjct 11564 TCCTCCAATTGCTTACCAGCAAAGATAAGCCTTTGCTGATCAGGTGGGATCCCTTCCTTG 11505
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
||||| || || ||||| ||||| ||||| ||||| | ||| || || | || ||
Sbjct 11504 TCTTGGATTTTCGCTTTAACATTGTCAATGGTATCTGAACTTTCCACCTCAAGGGTAATG 11445
Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | || || ||||| ||||||||
Sbjct 11444 GTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCAT 11410
>seq41040
Length=490441
Score = 150 bits (166), Expect = 4e-31
Identities = 173/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || ||||| || || || |||||||| || || || || |
Sbjct 178972 TACCACCACGGAGACGGAGCACCAAGTGTAGGGTGGACTCTTTCTGAATGTTGTAGTCGG 179031
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| |||| || ||||| || ||||| ||||||||||| || || ||||| ||||| |
Sbjct 179032 CCAAGGTTCTGCCATCTTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGTTGGTCTGGTG 179091
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || || || |||||||| || || || ||||| ||||| || || | || | |||
Sbjct 179092 GGATGCCCTCTTTGTCTTGAATTTTGGCCTTCACATTGTCAATTGTGTC-TGAGCTCTCT 179150
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 179151 ACCTCCAAAGTAATTGTCTTGCCAGTAAGGGTCTTCACAAAAATCTGCAT 179200
Score = 141 bits (156), Expect = 2e-28
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || |||||||| || || | ||| || || || |||||||| || || |||||||
Sbjct 167071 ACCACCCCTCAAACGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGC 167130
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | |||| || || || || ||||| ||||||||||| || || ||||| ||||| ||
Sbjct 167131 CAAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGG 167190
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || |||||||| || || || ||||| || || || ||| | || ||
Sbjct 167191 AATGCCTTCTTTGTCTTGAATTTTAGCCTTCACATTGTCGATGGTGTCAGAACTCTCCAC 167250
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | ||||| ||||| || |||||
Sbjct 167251 CTCAAGGGTGATTGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 167298
Score = 136 bits (150), Expect = 8e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642
||| || |||||||| || || | ||| || || || |||||||| || || |||||||
Sbjct 178289 ACCACCCCTCAAACGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAATCAGC 178348
Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702
| | |||| || || || || ||||| ||||||||||| || || ||||| ||||| ||
Sbjct 178349 CAAAGTTCTGCCATCCTCAAGCTGTTTGCCAGCAAAGATGAGCCTCTGTTGGTCTGGTGG 178408
Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762
|| ||||| || |||||||| || || || || || || || || ||| | || ||
Sbjct 178409 AATGCCTTCTTTGTCTTGAATTTTAGCCTTCACGTTGTCGATGGTGTCAGAACTCTCCAC 178468
Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| | || || ||||| || || | ||||| ||||| || |||||
Sbjct 178469 CTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTGACAAAGATTTGCAT 178516
Score = 132 bits (146), Expect = 9e-26
Identities = 169/230 (73%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || || || ||||| |||||||| || || || ||||
Sbjct 178516 TACCACCACGAAGACGGAGCACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAGTCAG 178575
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || ||||| ||||| ||||||||||| || | ||||| || ||||| |
Sbjct 178576 CCAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGGG 178635
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || |||||||| || || || || || ||||| ||||| || || || | |||
Sbjct 178636 GAATACCCTCCTTATCCTGGATTTTGGCCTTCACATTGTCAATTGTGTC-CGAGCTCTCT 178694
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| || |||||||| || | || || || || ||||||||
Sbjct 178695 ACCTCTAAAGTAATAGTCTTGCCAGTAAGGGTTTTCACGAAAATCTGCAT 178744
Score = 129 bits (142), Expect = 1e-24
Identities = 169/230 (73%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || || || || ||||| |||||||| || || || ||||
Sbjct 167298 TACCACCACGAAGACGGAGCACCAAATGGAGGGTAGACTCTTTCTGAATGTTGTAGTCAG 167357
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
||| | | || ||||| ||||| ||||||||||| || | ||||| || ||||| |
Sbjct 167358 CCAGAGTACGTCCATCTTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGG-G 167416
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || |||||||| || || || || || ||||| ||||| || || || | |||
Sbjct 167417 GGATACCCTCCTTATCCTGGATTTTGGCCTTCACATTGTCAATTGTGTC-CGAGCTCTCT 167475
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || ||||| || |||||||| || | || || || || ||||||||
Sbjct 167476 ACCTCTAAAGTAATAGTCTTGCCAGTAAGGGTTTTCACGAAAATCTGCAT 167525
Score = 120 bits (132), Expect = 6e-22
Identities = 166/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| || || ||||| || || || |||||| | || || || || |
Sbjct 167753 TACCACCACGGAGACGGAGCACCAAGTGTAGGGTGGACTCTTTCCGAATGTTGTAGTCGG 167812
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| |||| || ||||| || ||||| ||||||||||| || || ||||| ||||| |
Sbjct 167813 CCAAGGTTCTGCCATCTTCAAGCTGTTTACCAGCAAAGATGAGCCTCTGTTGGTCTGGTG 167872
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGT-TCT 82760
| || || || || |||||||| || || || ||||| ||||| || ||| || | ||
Sbjct 167873 GGATGCCCTCTTTGTCTTGAATTTTGGCCTTCACATTGTCAATTGTGTCA-GAGCTCTCC 167931
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || || ||||| || || | ||||| ||||| || |||||
Sbjct 167932 ACCTCAAGGGTGATGGTCTTTCCAGTGAGGGTCTTCACAAAAATTTGCAT 167981
Score = 111 bits (122), Expect = 3e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || || || || || || ||||| || || || ||||||| || | | ||
Sbjct 173553 ACGGAGCACCAAATGGAGGGTGGACTCTTTTTGGATGTTGTAATCAGCAAGGGTACGCCC 173612
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || |||| ||| || || | || || || || || || ||||||||
Sbjct 173613 ATCCTCCAGCTGCTTGCCAGAAAAAATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 173672
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||| || || || ||||| || || ||||| | || ||||| | ||| ||
Sbjct 173673 ATCTTGAATTTTAGCCTTCACATTGTCTATGGTATCTGAACTCTCAACTTCAAGAGTAAT 173732
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||| || |||||
Sbjct 173733 GGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 173768
Score = 111 bits (122), Expect = 3e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || || || || || || || || || || || ||||||| || | | ||
Sbjct 179441 ACGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGGGTACGCCC 179500
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || || || || |||||||| || || | || || || || || || ||||||||
Sbjct 179501 ATCCTCCAGCTGCTTGCCAGCAAAAATGAGACGCTGCTGGTCCGGTGGGATCCCTTCCTT 179560
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||||||||| || || || ||||| || || ||||| | || ||||| | ||| ||
Sbjct 179561 ATCTTGAATTTTAGCCTTCACATTGTCTATGGTATCTGAACTCTCAACTTCGAGAGTGAT 179620
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|||||||| || | ||||| ||||| || |||||
Sbjct 179621 GGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCAT 179656
>seq42027
Length=16722
Score = 100 bits (110), Expect = 6e-16
Identities = 155/222 (70%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| ||||| || || ||||| || || || || | || | | ||
Sbjct 5695 ACGGAGGACGAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCC 5636
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCT------GGAGGTATTCC 82708
|||||| ||||| ||||| || ||||| | || || || || || || |||||
Sbjct 5635 GTCTTCGAGTTGCTTTCCGGCGAAGATCAACCTCTGCTGGTCCTGGTCCGGTGGGATTCC 5576
Query 82709 TTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAA 82768
|||||| ||||| ||||| ||||| ||||| || || || || | ||| || || |
Sbjct 5575 TTCCTTGTCTTGGATCTTAGCTTTCACATTGTCGATTGTGTCGGAGGATTCAACCTCAAG 5516
Query 82769 AGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| || || | || || || || ||||||||
Sbjct 5515 GGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 5474
>seq38694
Length=34704
Score = 98.7 bits (108), Expect = 2e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 82670 TCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGC 82729
|||| |||||| | ||||| ||||| | || || |||||||||||||| ||||| ||
Sbjct 29387 TCCATTAAAGATGAACCTTTGCTGATCAGCTGGGATCCCTTCCTTATCTTGGATCTTGGC 29446
Query 82730 TTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAA 82789
|||| | || ||||| ||||| | || || ||||| || || |||||||| |||||
Sbjct 29447 TTTTGCGTTATCAATGGTATCTGAACTCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAA 29506
Query 82790 CGTCTTTACAAATATCTGCATT 82811
|| || | || |||||||||
Sbjct 29507 AGTTTTCATGAAGATCTGCATT 29528
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981267857953296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |