Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq38445 104 6e-17 seq38441 104 6e-17 >seq38445 Length=121340 Score = 104 bits (114), Expect = 6e-17 Identities = 138/187 (74%), Gaps = 10/187 (5%) Strand=Plus/Minus Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366 |||||||||| || || | ||||| |||||| | || || || |||||||||| Sbjct 96349 GACATTTGAACGATGGAGACTTTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGT 96290 Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTAT--CTGGATTGACATTTCGATTAAA--TGTA 305422 |||| |||| ||||| | ||||| ||||| || | ||||| || | || ||| Sbjct 96289 CTATCATGGGTCATAGAATCAAA--ATTATGCCTTACTCTACATTCCGGCTTAACTTGTC 96232 Query 305423 AGTG-CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACC 305481 ||| ||| | || |||||||| ||||||||||| ||||||||||| |||||||| || Sbjct 96231 AGTAACTTCT---CCATATAATGCTGATTTTGATGGTGATGAAATGAACATGCATGTTCC 96175 Query 305482 TCAATCA 305488 ||| ||| Sbjct 96174 TCAGTCA 96168 >seq38441 Length=114623 Score = 104 bits (114), Expect = 6e-17 Identities = 138/187 (74%), Gaps = 10/187 (5%) Strand=Plus/Minus Query 305307 GACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGT 305366 |||||||||| || || | ||||| |||||| | || || || |||||||||| Sbjct 96354 GACATTTGAACGATGGAGACTTTGTTCTCTTCAATCGTCAGCCTAGTCTTCATAAAATGT 96295 Query 305367 CTATGATGGCTCATAAAGTCAAAGTATTAT--CTGGATTGACATTTCGATTAAA--TGTA 305422 |||| |||| ||||| | ||||| ||||| || | ||||| || | || ||| Sbjct 96294 CTATCATGGGTCATAGAATCAAA--ATTATGCCTTACTCTACATTCCGGCTTAACTTGTC 96237 Query 305423 AGTG-CTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACC 305481 ||| ||| | || |||||||| ||||||||||| ||||||||||| |||||||| || Sbjct 96236 AGTAACTTCT---CCATATAATGCTGATTTTGATGGTGATGAAATGAACATGCATGTTCC 96180 Query 305482 TCAATCA 305488 ||| ||| Sbjct 96179 TCAGTCA 96173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186136678681904