Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04] 44,464 sequences; 394,454,697 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq39612 95.1 6e-15 >seq39612 Length=49512 Score = 95.1 bits (104), Expect = 6e-15 Identities = 142/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 65087 CGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATTC 65146 || || ||||| ||||| ||||| | | | |||||| ||||| ||||| ||| | | Sbjct 25069 CGAGTACCAAATTGACCGTTTGGTTTCAGCAGATTAATGTTGTTGCTACCAACAAAGTCC 25010 Query 65147 TGAGCCATTCCGATAATTGCTGC-ATTTAAACTCGCTTCACCGTGATGATATCCTGAATG 65205 || |||||||| || |||| ||| | | ||| |||||| || || || | || || Sbjct 25009 TGTGCCATTCCTATGATTG-TGCTAGCCAGACTTTGTTCACCATGGTGGTAAGCAGAGTG 24951 Query 65206 TTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTAAA 65265 ||| || ||||| ||| ||||||| | |||||||||||| | || || || ||||| Sbjct 24950 TTCGGACACATAACCAATAAATTGGCCTACTTTTATTTCCTTGAACAACTTTTTCTTAAA 24891 Query 65266 T--GCAGAATACAATATT 65281 | |||||| | ||| || Sbjct 24890 TGAGCAGAAAAGAATCTT 24873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235552283829600