Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lotus_20japonicus_20[genbank_20GCA_5F000181115.2_202015-09-04]
44,464 sequences; 394,454,697 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq14423 149 5e-31
seq32376 132 4e-26
seq41040 122 8e-23
seq39663 120 3e-22
seq40108 118 9e-22
seq43196 116 3e-21
seq14855 109 5e-19
>seq14423
Length=23748
Score = 149 bits (164), Expect = 5e-31
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||| ||||||||| | ||||| ||||| |||||| ||
Sbjct 11410 ATGCAGATTTTTGTGAAAACTCTCACCGGCAAGACCATTACCCTTGAGGTGGAAAGTTCA 11469
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| ||||| |||||||| ||||| || ||||| |||||
Sbjct 11470 GATACCATTGACAATGTTAAAGCGAAAATCCAAGACAAGGAAGGGATCCCACCTGATCAG 11529
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || |||||||| || || ||| || | |||||||||
Sbjct 11530 CAAAGGCTTATCTTTGCTGGTAAGCAATTGGAGGATGGTCGCACCCTTGCTGATTACAAC 11589
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||||||||| ||| | || | ||| | || | ||||||||||
Sbjct 11590 ATTCAAAAGGAGTCTACCCTTCACCTTGTTCTTCGCCTCAGGGGTGGCAT 11639
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||| |||| || || | || || ||||| || || | ||
Sbjct 11637 CATGCAGATCTTTGTTAAGACTTTGACTGGGAAAACCATCACCCTTGAGGTTGAGTCCTC 11696
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | ||||| || || || || ||||| ||||| || || |||||
Sbjct 11697 GGACACCATTGACAATGTCAAGGCGAAGATCCAGGATAAAGAGGGCATCCCTCCAGATCA 11756
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | || || | || || |||||| | || || | |||| | | ||||||||
Sbjct 11757 GCAGAGGTTGATTTTTGCTGGGAAACAACTTGAGGATGGAAGGACCCTAGCTGATTACAA 11816
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | |||||||| | || ||| | ||||||||
Sbjct 11817 CATCCAGAAGGAGTCCACCCTTCATTTGGTGCTTCGATTGAGAGGTGGCAT 11867
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || ||||| || || |||| || ||| | || ||| | || ||||| ||
Sbjct 12093 CATGCAAATTTTTGTCAAGACCTTGACAGGAAAGACCATAACTTTGGAGGTGGAGAGCTC 12152
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || ||| || ||||| || || || ||||| ||||| || ||
Sbjct 12153 AGATACCATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAGGGCATCCCACCAGACCA 12212
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | |||| ||||| ||||| | ||||| | ||| || | ||||||||
Sbjct 12213 GCAGAGGCTTATATTTGCCGGGAAACAGCTTGAAGATGGAAGAACCCTTGCTGATTACAA 12272
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | |||||||| ||||| | || ||||||||
Sbjct 12273 CATTCAGAAGGAGTCTACTCTGCATTTGGTCTTGCGGCTTCGTGGTGGCAT 12323
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||||||||| || || |||||||| ||| ||||||| | || |||||| ||
Sbjct 12550 ATGCAGATATTTGTGAAGACCCTGACCGGAAAGACTATTACCTTGGAGGTGGAAAGCTCT 12609
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || || || ||||| || || || || || || |||
Sbjct 12610 GATACTATTGATAATGTGAAAGCGAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAA 12669
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| || || | || ||||| |||||||| || | || | | ||||||||
Sbjct 12670 CAGCGATTGATTTTTGCTGGCAAGCAATTGGAGGATGGCCGTACTTTGGCAGATTACAAT 12729
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||| ||||| || ||| | ||| | || | || | || ||||||
Sbjct 12730 ATTCAGAAGGAATCCACCCTGCATCTTGTCCTTCGCCTTCGTGGTGGC 12777
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||| | || || ||| | ||||| | || || || ||
Sbjct 12321 CATGCAGATTTTTGTGAAGACTTTAACTGGGAAGACCATTACCTTGGAGGTTGAGAGTTC 12380
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || || || || || |||||||| || || ||||| || ||
Sbjct 12381 TGATACCATTGATAATGTTAAGGCGAAGATCCAGGACAAAGAGGGTATCCCACCGGACCA 12440
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || ||||| || |||||||| | |||| || | ||||| ||
Sbjct 12441 GCAGAGGCTTATCTTTGCTGGCAAGCAGTTGGAAGATGGGCGGACCCTTGCTGATTATAA 12500
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || || | || ||||||||||| | || ||||| ||
Sbjct 12501 TATCCAGAAGGAATCCACTCTGCACTTGGTTTTGCGACTTCGCGGTGGAAT 12551
>seq32376
Length=6472
Score = 132 bits (146), Expect = 4e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || ||| |||| || || | || || ||||| || ||| | ||
Sbjct 768 CATGCAGATCTTTGTCAAGACTTTGACTGGGAAAACCATCACCCTTGAGGTCGAATCCTC 709
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || || |||||||| |||||||| || || || || |||||
Sbjct 708 AGATACCATTGACAATGTGAAGACGAAAATTCAGGACAAAGAGGGTATCCCTCCAGATCA 649
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||| | | || | || || |||||| | ||||| | |||| | | ||||||||
Sbjct 648 ACAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGAAGGACCTTGGCTGATTACAA 589
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | |||||||| |||| ||| | ||||||||
Sbjct 588 CATCCAGAAGGAGTCTACCCTTCATTTGGTGCTGCGATTGAGAGGTGGCAT 538
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || ||||| || || |||| || ||| | || ||| | || || ||| ||
Sbjct 540 CATGCAAATTTTTGTCAAGACCTTGACAGGAAAGACAATAACTTTGGAGGTTGAAAGCTC 481
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| | ||||| | || ||| || ||||| ||||| || ||||| || || |||||
Sbjct 480 AGATACTATTGATAATGTGAAATCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGATCA 421
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || |||||| | ||||| | |||| | | ||||||||
Sbjct 420 GCAGAGGCTTATTTTTGCTGGGAAACAACTTGAAGATGGAAGGACCTTGGCTGATTACAA 361
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| |||||||||| |||| || | ||||||||
Sbjct 360 CATCCAGAAGGAGTCCACCCTACATTTGGTGCTGCGACTGAGAGGTGGCAT 310
>seq41040
Length=490441
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || || || |||||| | |||||| | || || || ||
Sbjct 179200 ATGCAGATTTTTGTGAAGACCCTTACTGGCAAGACAATTACTTTGGAGGTAGAGAGCTCA 179141
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||||||||||||||| ||||| ||||| || |||
Sbjct 179140 GACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAA 179081
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || ||||| | ||||| | ||| | |||| ||||||
Sbjct 179080 CAGAGGCTCATCTTTGCTGGTAAACAGCTTGAAGATGGCAGAACCTTGGCCGACTACAAC 179021
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| |||| ||||| | ||| | || ||||| ||
Sbjct 179020 ATTCAGAAAGAGTCCACCCTACACTTGGTGCTCCGTCTCCGTGGTGGTAT 178971
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || |||||| | |||||||||||||| || ||
Sbjct 173768 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATTACTCTTGAAGTTGAGAGTTCA 173709
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || ||||||||||| || ||||| || ||||| || ||
Sbjct 173708 GATACCATAGACAATGTGAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCGGACCAG 173649
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | | ||||| || |||| || | ||| || | |||||||||
Sbjct 173648 CAGCGTCTCATTTTTTCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACAAC 173589
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||| ||||| ||| | |||||||| | ||| | || ||||| ||
Sbjct 173588 ATCCAAAAAGAGTCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGAAT 173539
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || |||||| | || ||||| ||||| || ||
Sbjct 179656 ATGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCA 179597
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || || | || || ||||||||||| || ||||| || ||||| || ||
Sbjct 179596 GATACCATAGACAATGTGAAGGCTAAAATTCAAGATAAGGAAGGGATCCCACCGGACCAG 179537
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | || ||||| || |||| || | ||| || | |||||||||
Sbjct 179536 CAGCGTCTCATTTTTGCTGGCAAGCAGCTGGAGGATGGGCGTACCCTTGCTGATTACAAC 179477
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | |||||||| | ||| | || ||||| ||
Sbjct 179476 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGAAT 179427
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || || ||||| ||||| ||
Sbjct 167981 ATGCAAATTTTTGTGAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 167922
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||||||||||||||| ||||| ||||| || |||
Sbjct 167921 GACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAA 167862
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || ||||| | ||||| | ||| | |||| ||||||
Sbjct 167861 CAGAGGCTCATCTTTGCTGGTAAACAGCTTGAAGATGGCAGAACCTTGGCCGACTACAAC 167802
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||| || ||||| ||| |||| ||||| | ||| | || ||||| ||
Sbjct 167801 ATTCGGAAAGAGTCCACCCTACACTTGGTGCTCCGTCTCCGTGGTGGTAT 167752
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || || ||||| ||||| ||
Sbjct 167298 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 167239
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||||||||||||||||||||||| ||||| || |||
Sbjct 167238 GACACCATCGACAATGTGAAGGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGACCAA 167179
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || |||||||| | || || | || | | |||||||||
Sbjct 167178 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTGGCTGATTACAAC 167119
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| ||| | || | || | |||||| |||||||
Sbjct 167118 ATTCAGAAAGAGTCCACCCTCCACCTTGTCCTTCGTTTGAGGGGTGG 167072
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || || ||||| ||||| ||
Sbjct 178516 ATGCAAATCTTTGTCAAGACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAGAGTTCT 178457
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | || || ||||||||||||||||||||||| ||||| || |||
Sbjct 178456 GACACCATCGACAACGTGAAGGCTAAAATTCAAGACAAAGAAGGCATTCCACCAGACCAA 178397
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || |||||||| | || || | || | | |||||||||
Sbjct 178396 CAGAGGCTCATCTTTGCTGGCAAACAGCTTGAGGATGGCAGAACTTTGGCTGATTACAAC 178337
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| || ||||| ||| | || | || | |||||| |||||||
Sbjct 178336 ATTCAGAAAGAGTCCACCCTCCACCTTGTCCTTCGTTTGAGGGGTGG 178290
Score = 102 bits (112), Expect = 7e-17
Identities = 163/233 (70%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | || || ||||| ||||| ||
Sbjct 179428 ATGCAGATCTTTGTGAAGACATTGACTGGAAAGACCATCACCCTTGAGGTGGAGAGCTCT 179369
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || ||||| |||||||| ||||| || || || ||
Sbjct 179368 GACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCAGACCAG 179309
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATT---GGAAGACAGTTCGACCGTTTCCGATTAC 27164
||| | | |||| ||| |||||||| | ||| ||||| || | | ||||||
Sbjct 179308 CAGAGGCTCATATTCGCTGGCAAACAGCTTGAGGATGACAGA---ACATTGGCTGATTAC 179252
Query 27165 AACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || ||||| ||| | || | || ||||| | || ||||| ||
Sbjct 179251 AACATTCAGAAAGAGTCCACCCTCCACCTTGTGTTGCGACTCCGTGGTGGTAT 179199
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || |||||| |||||||| | || || || ||
Sbjct 178744 ATGCAGATTTTCGTGAAAACCCTTACTGGCAAGACTATTACTTTAGAGGTAGAGAGCTCG 178685
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||| || || || || || || || || || ||
Sbjct 178684 GACACAATTGACAATGTGAAGGCCAAAATCCAGGATAAGGAGGGTATTCCCCCAGACCAG 178625
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||| | ||||| | || | | || ||||||
Sbjct 178624 CAAAGGTTGATTTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTGGCTGACTACAAC 178565
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| | |||||||| | ||| | || ||||| ||
Sbjct 178564 ATTCAGAAAGAGTCTACCCTCCATTTGGTGCTCCGTCTTCGTGGTGGTAT 178515
Score = 82.4 bits (90), Expect = 7e-11
Identities = 157/230 (68%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| || || |||||| |||||||| | || || || ||
Sbjct 167525 ATGCAGATTTTCGTGAAAACCCTTACTGGCAAGACTATTACTTTAGAGGTAGAGAGCTCG 167466
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || ||||| || || || || || || || || || ||
Sbjct 167465 GACACAATTGACAATGTGAAGGCCAAAATCCAGGATAAGGAGGGTATCCC-CCAGACCAG 167407
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || ||| | ||||| | || | | || ||||||
Sbjct 167406 CAAAGGTTGATTTTTGCTGGAAAGCAACTTGAAGATGGACGTACTCTGGCTGACTACAAC 167347
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| ||| | |||||||| | ||| | || ||||| ||
Sbjct 167346 ATTCAGAAAGAGTCTACCCTCCATTTGGTGCTCCGTCTTCGTGGTGGTAT 167297
Score = 82.4 bits (90), Expect = 7e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || || || || ||| | || || ||||| ||||| ||
Sbjct 178972 ATGCAAATCTTTGTCAAGACCCTCACAGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 178913
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || |||||||||||||| || || || || || |||||
Sbjct 178912 GACACCATTGACAATGTGAAGGCCAAAATTCAAGACAAGGAGGGTATTCCCCCAGATCAG 178853
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | ||| ||||||||| | || || | || | | ||||| |||
Sbjct 178852 CAAAGGCTTATTTTCGCGGGCAAACAACTTGAGGATGGCCGAACTCTGGCAGATTATAAC 178793
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| || | || | || ||||| | || ||||| ||
Sbjct 178792 ATCCAGAAAGAGTCAACTCTCCACCTTGTGTTGCGACTCCGTGGTGGTAT 178743
>seq39663
Length=443811
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||| || || | || || || || |||||| | ||
Sbjct 345485 CATGCAGATCTTTGTCAAGACATTGACGGGTAAAACAATCACCCTCGAGGTGGAATCCTC 345426
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | ||||| | || || || || || |||||||| ||||| ||||| |||||
Sbjct 345425 AGACACCATTGATAATGTGAAGGCGAAGATCCAGGACAAAGAGGGCATCCCACCAGATCA 345366
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| | | || | || || |||||| | || || | |||| | ||||||||||
Sbjct 345365 GCAAAGGCTGATTTTTGCTGGTAAACAACTCGAGGATGGAAGGACCCTCGCCGATTACAA 345306
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || |||||||| ||| | ||||||||| |||| ||| | || || ||
Sbjct 345305 CATCCAGAAGGAGTCCACCCTTCATTTGGTTCTGCGATTGAGAGGCGGTAT 345255
Score = 95.1 bits (104), Expect = 1e-14
Identities = 159/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| |||| |||||| | || || || || ||||| ||
Sbjct 345712 ATGCAAATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCCTCGAGGTGGAGAGTTCA 345653
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || || |||||||| ||||| || ||||| |||||
Sbjct 345652 GATACCATTGACAATGTTAAAGCCAAGATCCAAGACAAGGAAGGGATCCCACCTGATCAG 345593
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || || || ||||| || || || ||| | | || ||||||
Sbjct 345592 CAAAGGCTTATCTTTGCTGGGAAGCAATTAGAGGATGGTCGCACCTTAGCAGACTACAAC 345533
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | || | ||| | || | ||||||||||
Sbjct 345532 ATTCAGAAGGAGTCCACCCTTCACCTTGTTCTTCGCCTCAGGGGTGGCAT 345483
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || ||| | ||||| ||| | || || | || || || ||
Sbjct 345028 ATGCAAATCTTTGTTAAGACTTTAACCGGGAAGACCATAACATTGGAGGTTGAGAGTTCT 344969
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || ||||| || || || || || ||||| || ||
Sbjct 344968 GATACTATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAGGGTATTCCACCAGACCAG 344909
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || ||||||| || |||| | | ||||||||
Sbjct 344908 CAGAGGCTTATCTTTGCTGGGAAGCAGCTGGAAGATGGTAGGACCCTGGCTGATTACAAT 344849
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || ||||||||||| | || ||||| ||
Sbjct 344848 ATCCAGAAGGAGTCCACCCTGCACTTGGTTTTGCGGCTTCGTGGTGGTAT 344799
>seq40108
Length=192235
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || || | || || || || || ||| | ||
Sbjct 160319 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAAACCATCACCCTCGAGGTCGAATCCTCA 160378
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | ||||| || || || |||||||| || ||||||||||| ||
Sbjct 160379 GACACCATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGTATACCACCCGACCAG 160438
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || |||||| | || || | |||| | | |||||||||
Sbjct 160439 CAGAGGCTTATTTTTGCTGGGAAACAACTTGAGGATGGGAGGACCTTGGCTGATTACAAC 160498
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | ||||||||| | || ||| | || |||||
Sbjct 160499 ATCCAGAAGGAGTCCACCCTTCATTTGGTTCTTCGATTGAGAGGCGGCAT 160548
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| |||||||||||||||||| | || || | || ||||| ||
Sbjct 160091 ATGCAGATCTTTGTGAAAACTCTGACCGGCAAGACCATCACCTTAGAGGTGGAGAGTTCA 160150
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || || || || || ||||| || ||||| |||||
Sbjct 160151 GATACCATTGATAATGTAAAAGCCAAGATCCAGGATAAGGAAGGGATCCCACCTGATCAG 160210
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | | || | || ||||| || || || || || ||| || | || ||||||
Sbjct 160211 CAAAGGCTTATCTTTGCTGGCAAGCAGTTAGAGGATGGTCGCACCCTTGCTGACTACAAC 160270
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | || | ||| | || | ||||||| ||
Sbjct 160271 ATCCAGAAGGAGTCCACCCTTCACCTTGTTCTCCGCCTCAGGGGTGGTAT 160320
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||| || ||||| || || | || || ||| | ||||| | || |||||| ||
Sbjct 160774 CATGCAAATTTTTGTCAAGACCTTAACAGGAAAGACCATTACCTTAGAGGTGGAAAGCTC 160833
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
|| ||||||| | || ||| ||| || || ||||| || || || || || || ||
Sbjct 160834 TGATACGATTGATAATGTGAAAGCAAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 160893
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||||| | || | ||| || || || |||||||| | || | | ||||||||
Sbjct 160894 GCAGCGACTTATTTTCGCTGGTAAGCAGTTGGAAGATGGACGTACACTGGCAGATTACAA 160953
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215
||||||||||| || || | ||| | || | || | || ||||||
Sbjct 160954 TATTCAAAAGGAATCCACTCTGCATCTTGTCCTTCGACTTCGTGGTGGC 161002
>seq43196
Length=72091
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || ||| | ||||| || || ||||| |||
Sbjct 32292 ATGCAGATCTTTGTGAAGACCTTGACTGGTAAGACCATTACCCTGGAGGTGGAGAGCTCC 32233
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || || ||||||||||||||| ||||| || ||||| || ||
Sbjct 32232 GATACCATTGACAACGTGAAGGCAAAAATTCAAGACAAGGAAGGTATCCCACCGGACCAG 32173
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || ||||| || | |||| || | || ||||||
Sbjct 32172 CAGAGGTTGATCTTTGCAGGGAAGCAGTTGGAGGATGGAAGGACCCTTGCTGACTACAAC 32113
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214
||||| |||||||| ||| | || | || | ||| | || |||||
Sbjct 32112 ATTCAGAAGGAGTCCACCCTTCACCTTGTGCTCCGTCTTCGTGGTGG 32066
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||| |||| || ||| | || |||||||| ||||| ||
Sbjct 32520 ATGCAGATTTTCGTGAAGACTTTGACTGGTAAGACCATCACTCTTGAGGTGGAGAGCTCT 32461
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || || || || || || || || || || |||||
Sbjct 32460 GACACCATTGACAACGTGAAGGCTAAGATCCAGGATAAGGAGGGTATTCCCCCGGATCAG 32401
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || || || || | || || | ||| || | |||||||||
Sbjct 32400 CAGAGGTTGATTTTTGCTGGTAAGCAGCTCGAGGATGGAAGGACTCTTGCGGATTACAAC 32341
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| ||| | ||| | || ||||| | |||| || ||
Sbjct 32340 ATCCAGAAGGAGTCCACCCTTCATCTTGTGCTGCGTCTCAGGGGAGGTAT 32291
>seq14855
Length=14869
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || || || ||||| || ||||| ||| | || ||||| || || || ||
Sbjct 13463 ATGCAAATCTTCGTGAAAACCCTAACCGGGAAGACAATCACTCTCGAGGTAGAGAGTTCA 13404
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || || |||||||| ||||| || ||||| |||||
Sbjct 13403 GATACCATTGACAACGTGAAAGCTAAGATCCAAGACAAGGAAGGGATCCCACCTGATCAG 13344
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || |||||||| || || ||| || | || ||||||
Sbjct 13343 CAAAGGTTGATCTTTGCTGGGAAGCAATTGGAGGATGGTCGCACCCTTGCAGACTACAAC 13284
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| ||||||||||| ||| | || | ||| | ||| | ||||||| ||
Sbjct 13283 ATCCAAAAGGAGTCAACCCTTCACCTCGTTCTTCGTCTCAGGGGTGGTAT 13234
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || ||||| || ||| | |||||| | || || || ||
Sbjct 12780 CATGCAGATTTTTGTCAAGACCCTGACAGGAAAGACCATTACTTTGGAGGTTGAGAGTTC 12721
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| ||||||| | |||||| || ||||| || || || || || ||||| || ||
Sbjct 12720 AGACACGATTGATAATGTCAAAGCTAAGATTCAGGATAAGGAGGGTATCCCACCAGACCA 12661
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
||| | | || | || || || || |||||||| | ||| | | || || ||
Sbjct 12660 GCAGAGGCTTATCTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACCCTGGCTGACTATAA 12601
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| | ||||| || ||| | || |||||||||||| | || ||||| ||
Sbjct 12600 CATCCCGAAGGAATCTACCCTTCACTTGGTTTTGCGTCTTCGTGGTGGGAT 12550
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| || || |||| || ||| | || ||||| || || || ||
Sbjct 12551 ATGCAAATTTTTGTGAAGACATTGACGGGGAAGACCATAACTCTGGAGGTTGAGAGTTCT 12492
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | ||||| | || ||| || ||||| || || ||||| || || || |||||
Sbjct 12491 GATACAATTGACAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATCCCTCCGGATCAG 12432
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | | || | || || || || |||||||| | ||| |||| ||||| |||
Sbjct 12431 CAGAGACTTATCTTTGCTGGGAAGCAGTTGGAAGATGGAAGAACCCTTTCAGATTATAAC 12372
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || |||||||| || | || ||||||||||| | || ||||| ||
Sbjct 12371 ATCCAGAAGGAGTCTACACTGCACTTGGTTTTGCGGCTTCGTGGTGGGAT 12322
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || || |||| || || | || || || || || ||| | ||
Sbjct 13235 ATGCAGATCTTTGTCAAGACCTTGACAGGGAAAACCATCACCCTCGAGGTTGAATCCTCA 13176
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || || ||||||||||| || || || || |||||
Sbjct 13175 GACACTATCGATAATGTCAAGGCGAAGATCCAAGACAAAGAGGGTATTCCTCCGGATCAG 13116
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | || || | || || || || |||| || | |||| || | |||||||||
Sbjct 13115 CAAAGGTTGATTTTTGCTGGGAAGCAGCTGGAGGATGGAAGGACCCTTGCTGATTACAAC 13056
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || ||| | |||||||| | || ||| | ||||| ||
Sbjct 13055 ATCCAGAAGGAATCTACCCTTCATTTGGTGCTTCGATTGAGAGGTGGTAT 13006
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434676672353280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |