Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq19 98.7 9e-16
seq6 95.1 1e-14
seq4 93.3 4e-14
>seq19
Length=18159812
Score = 98.7 bits (108), Expect = 9e-16
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 28958 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 29017
||||||||| || ||| | ||||| | ||||| ||||| || ||| ||| |||
Sbjct 4557144 AAAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATAACCCTAGAAGTTGAAAG 4557203
Query 29018 CGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 29077
| || || | | | || | || || || ||||||||||| || || |||
Sbjct 4557204 CAGTGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAAGAAGGAGTTCCACCAGA 4557263
Query 29078 TCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTA 29137
||||||| | | || || || || |||||||| |||||| | ||| | || |||||
Sbjct 4557264 TCAACAACGTTTGATTTTCGCTGGTAAACAACTTGAAGATGGAAGAACCCTAGCTGATTA 4557323
Query 29138 CAATATTCAGAAGGAATCTACTCTTCA 29164
||||||||| |||||||||||||||||
Sbjct 4557324 CAATATTCAAAAGGAATCTACTCTTCA 4557350
>seq6
Length=33111450
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| || | ||||| | || ||||| ||||| ||| || |||| |
Sbjct 6668878 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 6668937
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || ||||| || || ||||| || ||| | || |||||||
Sbjct 6668938 GACACCATTGACAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATTCCACCAGATCAA 6668997
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| || ||||| ||||| || || ||||| |||||| | ||| |||| ||||| ||
Sbjct 6668998 CAGAGGCTTATATTTGCTGGAAAGCAACTTGAAGATGGAAGGACTTTGGCAGATTATAAC 6669057
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188
|| |||||||| ||||||||||| |||| | || || | |||||
Sbjct 6669058 ATCCAGAAGGAGTCTACTCTTCATTTGGTACTGCGTTTGAGGGGAGG 6669104
>seq4
Length=27333975
Score = 93.3 bits (102), Expect = 4e-14
Identities = 160/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020
||||||||| ||| | ||||| | || ||||||||||| ||| ||| ||| |
Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448
Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080
|| || | | | | | ||| || ||| ||||| ||||| | || ||||||
Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508
Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140
|| ||| | || || || || |||||||| |||||| | ||| | || ||||| ||
Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTATAA 24477568
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTT-ACGATTACGAGGAGGG 29189
||| ||||||||||| || |||||| | ||||| | | ||| | ||||||
Sbjct 24477569 TATCCAGAAGGAATCAACACTTCACCTTGTGTTGAGGCTTA-GGGGAGGG 24477617
Score = 82.4 bits (90), Expect = 7e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105
|||||| || || ||||| | ||| |||||| || || | |||||||| || ||
Sbjct 3994307 AAAATTCAGGACAAGGAAGGAATCCCCCCAGATCAGCAGAGGTTGATCTTTGCTGGTAAG 3994366
Query 29106 CAACTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCAC 29165
|||||||||||| | || | || || |||||||||||||||||||| || ||||||
Sbjct 3994367 CAACTGGAAGATGGAAGGACCTTAGCTGACTACAATATTCAGAAGGAATCAACCCTTCAC 3994426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428265144257315
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |