Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq4 131 3e-25
seq5 125 1e-23
seq19 123 4e-23
seq9 84.2 3e-11
>seq4
Length=27333975
Score = 131 bits (144), Expect = 3e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| | || || ||||| || ||| | ||| | ||| |
Sbjct 24477618 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAAACCATTACTTTGGAGGTGGAAAGTTCT 24477677
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||||||| |||| | ||| || ||||| ||||| |||||||| ||||| |||||
Sbjct 24477678 GATACAATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCACCGGATCAG 24477737
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| ||| | ||||||||||| || |||||||| ||| | | || || | |||||||||
Sbjct 24477738 CAGAGGTTGATTTTTGCAGGGAAGCAATTAGAAGATGGAAGGACTTTGGCTGATTATAAT 24477797
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765
||||| || || || ||| | || | ||| | ||| | || || ||
Sbjct 24477798 ATTCAGAAGGAGTCTACTCTTCACCTTGTTCTTCGTCTGCGTGGGGG 24477844
Score = 107 bits (118), Expect = 3e-18
Identities = 146/200 (73%), Gaps = 4/200 (2%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || |||| || || || |||||||| ||||| |||| | || || |
Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGA-AGTGGAG-AGT 24477446
Query 124598 T--GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
| || || || || |||| ||| ||||||||||| ||||| || ||||| |||
Sbjct 24477447 TCCGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGAT 24477506
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|| || || | ||||| || ||||||||| | || ||| | |||| ||| ||||||
Sbjct 24477507 CAGCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTAT 24477566
Query 124716 AATATTCAAAAAGAATCAAC 124735
||||| || || ||||||||
Sbjct 24477567 AATATCCAGAAGGAATCAAC 24477586
Score = 89.7 bits (98), Expect = 8e-13
Identities = 171/248 (69%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| || | || || ||||| || || || || || ||||| | || |||
Sbjct 24477162 ATGCAAATCTTCGTGAAAACCCTAACCGGAAAGACCATCACCCTAGAGGTGGAGAGCTCC 24477221
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|| ||||| ||| ||||| || ||||| || || ||||| || |||||||| ||
Sbjct 24477222 -GACACAATCGATAACGTAAAAGCTAAGATTCAGGACAAGGAAGGAATTCCACCTGACCA 24477280
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|| | || || || || |||||||| ||||||| |||| || | | || || ||
Sbjct 24477281 GCAGCGTCTGATCTTCGCCGGAAAACAGCTAGAGGACGGTCGCACCCTCGCCGACTACAA 24477340
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT-TAAAAATT 124776
||| || ||||||||||| | || | || | ||| | || || || || ||| ||
Sbjct 24477341 TATCCAGAAAGAATCAACCCTCCACCTCGTCCTCCGTCTCCGTGGAGGAATGCAAATCTT 24477400
Query 124777 CATAAAAA 124784
| ||||||
Sbjct 24477401 CGTAAAAA 24477408
>seq5
Length=26376911
Score = 125 bits (138), Expect = 1e-23
Identities = 168/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597
|||||||| ||| | ||||| | || || || || || || | || | || |||
Sbjct 2894150 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTGGAGAGCTC- 2894092
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| |||||| ||| | || ||||||||||| ||||| || || ||||| || ||
Sbjct 2894091 TGACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCA 2894032
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
||| |||||||||||||| || || ||| | |||||| |||| || |||| || |||||
Sbjct 2894031 ACAGAGGCTTATTTTTGCTGGCAAGCAACTCGAGGATGGTCGTACCTTAGCTGACTATAA 2893972
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || ||||| |||||| | || | || || ||| | || ||||||||
Sbjct 2893971 CATCCAGAAAGAGTCAACTCTCCACCTTGTCTTGCGTCTCCGTGGTGGTAT 2893921
Score = 122 bits (134), Expect = 1e-22
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | |||||||| || ||||| || || ||| | || |||| |
Sbjct 2894606 ATGCAAATCTTTGTTAAGACACTCACTGGCAAGACCATCACTCTCGAAGTTGAGAGTTCT 2894547
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || |||| |||| ||||||||||| || ||||| || ||||| || |||
Sbjct 2894546 GATACCATAGATAATGTAAAGGCTAAAATTCAAGACAAGGAAGGGATCCCACCAGACCAA 2894487
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || |||||||| || || ||| | |||||| | || || | | ||||| ||
Sbjct 2894486 CAGCGTCTCATTTTTGCTGGCAAGCAACTTGAGGATGGGCGTACCCTTGCTGATTACAAC 2894427
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| ||||| || || || | |||||||| | ||| | || ||||||||
Sbjct 2894426 ATCCAAAAGGAGTCCACCCTCCATTTGGTGCTTCGTCTTCGTGGTGGTAT 2894377
Score = 100 bits (110), Expect = 4e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||||||| | ||||| | || || || || || || | || ||||
Sbjct 2894378 ATGCAAATATTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCG 2894319
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| || || |||| | || ||||||||||| ||||| || || ||||| || |||
Sbjct 2894318 GACACCATAGATAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 2894259
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| || ||||| ||||| || || || | |||||| | || || |||| || || ||
Sbjct 2894258 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCGGACCTTAGCTGACTACAAC 2894199
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
|| || || ||||| ||| | ||||| || | ||| | || ||||||||
Sbjct 2894198 ATCCAGAAGGAATCCACTCTCCATTTAGTGCTTCGTCTTCGTGGTGGTAT 2894149
>seq19
Length=18159812
Score = 123 bits (136), Expect = 4e-23
Identities = 167/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
|||||| || || | || || ||||| || ||||| ||||| |||| ||||| |
Sbjct 4557147 AATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATAACCCTAGAAGTTGAAAGCAG 4557206
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
||| ||||| ||| | ||| || || |||||||||||||| | ||||| |||||
Sbjct 4557207 TGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAAGAAGGAGTTCCACCAGATCA 4557266
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||| | | ||||| || || |||||| | || ||| | |||| ||| ||||| ||
Sbjct 4557267 ACAACGTTTGATTTTCGCTGGTAAACAACTTGAAGATGGAAGAACCCTAGCTGATTACAA 4557326
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770
||||||||| ||||| ||| | ||| | ||| | | | || ||||| ||||
Sbjct 4557327 TATTCAAAAGGAATCTACTCTTCATCTTGTTCTTAGGCTCCGTGGTGGAATTA 4557379
>seq9
Length=21753712
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 124632 GATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAG 124691
|| || |||||||| || ||||| || |||||||| |||||||| || || || | ||
Sbjct 2446104 GACAAGGAAGGTATCCCTCCTGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAA 2446045
Query 124692 GATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTT 124750
||| | || || | | ||||||||||| ||||| ||||| || | |||||||| ||
Sbjct 2446044 GATGGACGCACTCTTGCCGATTATAATATACAAAAGGAATCCACACTTCATTTGGTCTT 2445986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755327827446400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |