Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq9 185 8e-42 seq2 179 3e-40 seq11 122 8e-23 >seq9 Length=21753712 Score = 185 bits (204), Expect = 8e-42 Identities = 574/873 (66%), Gaps = 29/873 (3%) Strand=Plus/Plus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 |||||||| || ||||||||||| | ||| ||||| ||||||||||| || || ||| Sbjct 19303614 GACATAACAGAAGCCTTTTGATATTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCT 19303673 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046 | | ||||| |||||| |||||||||| || | | || ||| || | | Sbjct 19303674 TGAAGCGAAATCAGTTCCATCCAATCAAAAGGGTTCT--GCACTTCATACACCTTCCCAC 19303731 Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105 | ||||| || | ||||| |||||||| ||||| ||||||||||| |||| ||| | Sbjct 19303732 A-CCCAAGCGCACCCAATAACCTATCCGCAACAAACTCTATATACTGACTCATCAAAACC 19303790 Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165 | |||||||| | || | || | || || | ||| | | | || || | Sbjct 19303791 CCATTCATTCCCACCAACGCACATGGAAGCGCGTCACACACAAACTCTCTCTCGATCTCC 19303850 Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTT-----TAATAAGT 16220 || || ||| | || || ||| || || | ||| | || | || || Sbjct 19303851 ACTGCGTCACGAACAAT-TCCCTTCACACGCTCCTCT--GGAAGCTTCTTCTTCATTAGA 19303907 Query 16221 GTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280 | || | || |||||| ||||||||||| | ||||| || | ||| ||||||| Sbjct 19303908 GAGTATAA--TAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGT 19303965 Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340 | || ||||||||||| ||||||| || |||||||||| ||||||||| || || Sbjct 19303966 TCGAGAATGTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGC 19304025 Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400 ||||| || ||||| |||||||| ||||| ||||| | || || || | | | Sbjct 19304026 TTCCAGAGAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGAT- 19304084 Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460 | | || || |||||| | ||||| | ||||| | | ||||||| ||| Sbjct 19304085 --TCTGAACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGG 19304142 Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520 | || || || | ||||| ||||| || | ||| ||||| || || | | Sbjct 19304143 TTTCAATCGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAA 19304202 Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579 | | |||||||| || || || ||||| || || || || || || || || |||||| Sbjct 19304203 GGAGGCTATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCA- 19304261 Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAA--AACCTTTCTGCTAAGTTTTCGTTAACTA 16637 | || || | | ||| | || |||| | |||||| | || | |||||| ||| | Sbjct 19304262 CGCGCCTCAGCGACTTGAATTT--GAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGA 19304319 Query 16638 TTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-- 16695 |||| ||| || || || || || || |||||||| || || | ||| | || Sbjct 19304320 TTCCGTCGGAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGG 19304379 Query 16696 TGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAA 16755 ||| || | ||| | || ||||| || | |||||| ||||| | ||||| || Sbjct 19304380 TGAGAGAAT--CCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAA 19304437 Query 16756 AGAAGCAACAGCCTTTTTATACATTTTCCATAT 16788 ||||| | || || || ||||||| ||| || Sbjct 19304438 TGAAGCTTCGGCTTTCTTGTACATTTCCCAGAT 19304470 >seq2 Length=24697652 Score = 179 bits (198), Expect = 3e-40 Identities = 569/869 (65%), Gaps = 21/869 (2%) Strand=Plus/Plus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 |||||||| || ||| || ||||||| ||| ||||| ||||||||||| || || || Sbjct 21046607 GACATAACAGAAGCTTTCTGGTATTCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCC 21046666 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046 | | ||||| |||||| |||||||||| |||| | ||| ||| || | | Sbjct 21046667 TGAAGCGAAATCAATTCCATCCAATCAAAAGGGTTTT--GCACATCATACACCTTCCCAC 21046724 Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105 | ||||| || | ||||| ||||| || || || || ||||| || |||| ||| | Sbjct 21046725 A-CCCAAGCGCACCCAATAACCTATCAGCTACGAACTCAATATATTGACTCATCAAACCC 21046783 Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165 | ||||| || | || || | || || | ||| | | ||||| | | Sbjct 21046784 CCATTCATCCCCACCAACGCGCATGGAAGCGCGTCACACACAAACTCCCTCTCTATTTCA 21046843 Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTA 16225 ||||| ||| | || | | || | || || ||| | || | | | ||| Sbjct 21046844 ACCGCATCACGCACAATCCCCTTCACG-CGCTCTTCT--GGAAGCTTC--TTATTCATTA 21046898 Query 16226 AACATTATA-CAAGCA----AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280 | | || | |||||| |||||||| || || || || || | |||||||||| Sbjct 21046899 GAGAGTACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGT 21046958 Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340 |||| || |||||||| ||||| || |||||||| || | ||||||||| || || Sbjct 21046959 TTGAGAAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGC 21047018 Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400 ||||| ||||| ||||||||||| ||||| ||||| | || ||| || | | | Sbjct 21047019 TTCCAGAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGAT- 21047077 Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460 | | || || ||||| ||||| | ||||||| ||| || || Sbjct 21047078 --TCTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCG 21047135 Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520 |||||||||| | ||||| |||||| || | |||| ||||| || || | | Sbjct 21047136 TCTCTATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAA 21047195 Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579 | | ||||||||| || ||||| |||||||| ||||| ||||| || || || || ||| Sbjct 21047196 GGAGACTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCA- 21047254 Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639 | || || | | ||||| || | |||||| | || | |||||| || ||| Sbjct 21047255 CGCGCCTCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATT 21047314 Query 16640 CCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAA 16699 || ||| ||| || || || || || |||||||| || || | |||| || | Sbjct 21047315 CCGTCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTG 21047374 Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759 || ||||| | ||||| || | |||||| ||||| | ||||| || ||| Sbjct 21047375 AGGGAGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAA 21047434 Query 16760 GCAACAGCCTTTTTATACATTTTCCATAT 16788 || | || ||||| ||||||| ||| || Sbjct 21047435 GCTTCTGCTTTTTTGTACATTTCCCAGAT 21047463 >seq11 Length=35963958 Score = 122 bits (134), Expect = 8e-23 Identities = 569/892 (64%), Gaps = 21/892 (2%) Strand=Plus/Minus Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988 |||||||| || ||| ||||| |||| ||| ||||| ||||||||||| || || ||| Sbjct 2851039 GACATAACAGAAGCTTTCTGATAATCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCT 2850980 Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046 | | ||||| |||||| ||||||| || || | | ||| ||| ||| | | Sbjct 2850979 TGAAGCGAAATTAGTTCCATCCAATCAAACGGGTTCT--GCACATCATACACCTTACCAC 2850922 Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105 | ||||| || | ||||| |||||||| ||||| || ||||| || |||| ||| | Sbjct 2850921 A-CCCAAGCGCACCCAATAACCTATCCGCAACAAACTCAATATATTGACTCATCAAAACC 2850863 Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165 | ||||| || | || | || | ||| || | ||| | | ||||| | Sbjct 2850862 CCATTCATCCCAACCAACGCACATGGAAGTGCGTCACAAACAAACTCCCTCTCTATCTCC 2850803 Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTA 16225 || || ||| | || | | || || || | | || | ||| | | ||| Sbjct 2850802 ACAGCATCACGCACAATCCCCTTCAC-ACGCTCCT---CTGAAAGCTTATTCT-TCATTA 2850748 Query 16226 AACATTATA-----CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280 | | || | ||||| ||||||||||| | ||||| || | ||| ||||||| Sbjct 2850747 GAGAGTACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGT 2850688 Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340 |||| || ||||| || ||||| || |||| || |||| ||| |||||||| || Sbjct 2850687 TTGAGAAGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGC 2850628 Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400 ||||| ||||| || |||||||| ||||| ||||| | |||||| || | | | Sbjct 2850627 TTCCAGAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGAT- 2850569 Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460 | | || || ||||| | ||||| | ||||| |||||| || Sbjct 2850568 --TCTGAACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTG 2850511 Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520 | || | || | || ||| ||||| || ||| ||||| || || | | Sbjct 2850510 TTTCAACCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAA 2850451 Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579 | | ||| ||||| || ||||| ||||| || || || || || || || || |||||| Sbjct 2850450 GGAGACTGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCA- 2850392 Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639 | || || | | ||| | ||||| ||||||| | || | |||||| ||| || Sbjct 2850391 CGCGCCTCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATA 2850332 Query 16640 CCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAA 16699 || || || || || || || || | |||||| | ||| | |||| || | Sbjct 2850331 CCGTCAGAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTG 2850272 Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759 || || ||||| | || | || | ||| || || || | ||||| ||||| Sbjct 2850271 AGGTTCTCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGAT 2850212 Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811 || | || || |||||||| | ||| || | ||| ||| ||||||| Sbjct 2850211 GCTTCGGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACA 2850160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462433529057800