Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq9 185 8e-42
seq2 179 3e-40
seq11 122 8e-23
>seq9
Length=21753712
Score = 185 bits (204), Expect = 8e-42
Identities = 574/873 (66%), Gaps = 29/873 (3%)
Strand=Plus/Plus
Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988
|||||||| || ||||||||||| | ||| ||||| ||||||||||| || || |||
Sbjct 19303614 GACATAACAGAAGCCTTTTGATATTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCT 19303673
Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046
| | ||||| |||||| |||||||||| || | | || ||| || | |
Sbjct 19303674 TGAAGCGAAATCAGTTCCATCCAATCAAAAGGGTTCT--GCACTTCATACACCTTCCCAC 19303731
Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105
| ||||| || | ||||| |||||||| ||||| ||||||||||| |||| ||| |
Sbjct 19303732 A-CCCAAGCGCACCCAATAACCTATCCGCAACAAACTCTATATACTGACTCATCAAAACC 19303790
Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165
| |||||||| | || | || | || || | ||| | | | || || |
Sbjct 19303791 CCATTCATTCCCACCAACGCACATGGAAGCGCGTCACACACAAACTCTCTCTCGATCTCC 19303850
Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTT-----TAATAAGT 16220
|| || ||| | || || ||| || || | ||| | || | || ||
Sbjct 19303851 ACTGCGTCACGAACAAT-TCCCTTCACACGCTCCTCT--GGAAGCTTCTTCTTCATTAGA 19303907
Query 16221 GTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280
| || | || |||||| ||||||||||| | ||||| || | ||| |||||||
Sbjct 19303908 GAGTATAA--TAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGT 19303965
Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340
| || ||||||||||| ||||||| || |||||||||| ||||||||| || ||
Sbjct 19303966 TCGAGAATGTAAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGC 19304025
Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400
||||| || ||||| |||||||| ||||| ||||| | || || || | | |
Sbjct 19304026 TTCCAGAGAAAAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGAT- 19304084
Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460
| | || || |||||| | ||||| | ||||| | | ||||||| |||
Sbjct 19304085 --TCTGAACCGTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGG 19304142
Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520
| || || || | ||||| ||||| || | ||| ||||| || || | |
Sbjct 19304143 TTTCAATCGCGTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAA 19304202
Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579
| | |||||||| || || || ||||| || || || || || || || || ||||||
Sbjct 19304203 GGAGGCTATACATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCA- 19304261
Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAA--AACCTTTCTGCTAAGTTTTCGTTAACTA 16637
| || || | | ||| | || |||| | |||||| | || | |||||| ||| |
Sbjct 19304262 CGCGCCTCAGCGACTTGAATTT--GAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGA 19304319
Query 16638 TTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC-- 16695
|||| ||| || || || || || || |||||||| || || | ||| | ||
Sbjct 19304320 TTCCGTCGGAGGCGGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGG 19304379
Query 16696 TGAAAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAA 16755
||| || | ||| | || ||||| || | |||||| ||||| | ||||| ||
Sbjct 19304380 TGAGAGAAT--CCCAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAA 19304437
Query 16756 AGAAGCAACAGCCTTTTTATACATTTTCCATAT 16788
||||| | || || || ||||||| ||| ||
Sbjct 19304438 TGAAGCTTCGGCTTTCTTGTACATTTCCCAGAT 19304470
>seq2
Length=24697652
Score = 179 bits (198), Expect = 3e-40
Identities = 569/869 (65%), Gaps = 21/869 (2%)
Strand=Plus/Plus
Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988
|||||||| || ||| || ||||||| ||| ||||| ||||||||||| || || ||
Sbjct 21046607 GACATAACAGAAGCTTTCTGGTATTCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCC 21046666
Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046
| | ||||| |||||| |||||||||| |||| | ||| ||| || | |
Sbjct 21046667 TGAAGCGAAATCAATTCCATCCAATCAAAAGGGTTTT--GCACATCATACACCTTCCCAC 21046724
Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105
| ||||| || | ||||| ||||| || || || || ||||| || |||| ||| |
Sbjct 21046725 A-CCCAAGCGCACCCAATAACCTATCAGCTACGAACTCAATATATTGACTCATCAAACCC 21046783
Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165
| ||||| || | || || | || || | ||| | | ||||| | |
Sbjct 21046784 CCATTCATCCCCACCAACGCGCATGGAAGCGCGTCACACACAAACTCCCTCTCTATTTCA 21046843
Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTA 16225
||||| ||| | || | | || | || || ||| | || | | | |||
Sbjct 21046844 ACCGCATCACGCACAATCCCCTTCACG-CGCTCTTCT--GGAAGCTTC--TTATTCATTA 21046898
Query 16226 AACATTATA-CAAGCA----AAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280
| | || | |||||| |||||||| || || || || || | ||||||||||
Sbjct 21046899 GAGAGTACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGT 21046958
Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340
|||| || |||||||| ||||| || |||||||| || | ||||||||| || ||
Sbjct 21046959 TTGAGAAGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGC 21047018
Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400
||||| ||||| ||||||||||| ||||| ||||| | || ||| || | | |
Sbjct 21047019 TTCCAGAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGAT- 21047077
Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460
| | || || ||||| ||||| | ||||||| ||| || ||
Sbjct 21047078 --TCTGAACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCG 21047135
Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520
|||||||||| | ||||| |||||| || | |||| ||||| || || | |
Sbjct 21047136 TCTCTATTGCGTGGAATAATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAA 21047195
Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579
| | ||||||||| || ||||| |||||||| ||||| ||||| || || || || |||
Sbjct 21047196 GGAGACTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCA- 21047254
Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639
| || || | | ||||| || | |||||| | || | |||||| || |||
Sbjct 21047255 CGCGCCTCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATT 21047314
Query 16640 CCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAA 16699
|| ||| ||| || || || || || |||||||| || || | |||| || |
Sbjct 21047315 CCGTCGGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTG 21047374
Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759
|| ||||| | ||||| || | |||||| ||||| | ||||| || |||
Sbjct 21047375 AGGGAGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAA 21047434
Query 16760 GCAACAGCCTTTTTATACATTTTCCATAT 16788
|| | || ||||| ||||||| ||| ||
Sbjct 21047435 GCTTCTGCTTTTTTGTACATTTCCCAGAT 21047463
>seq11
Length=35963958
Score = 122 bits (134), Expect = 8e-23
Identities = 569/892 (64%), Gaps = 21/892 (2%)
Strand=Plus/Minus
Query 15929 GACATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCT 15988
|||||||| || ||| ||||| |||| ||| ||||| ||||||||||| || || |||
Sbjct 2851039 GACATAACAGAAGCTTTCTGATAATCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCT 2850980
Query 15989 TCTAATGAAATATTTTCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGC 16046
| | ||||| |||||| ||||||| || || | | ||| ||| ||| | |
Sbjct 2850979 TGAAGCGAAATTAGTTCCATCCAATCAAACGGGTTCT--GCACATCATACACCTTACCAC 2850922
Query 16047 ATCCCAATTCCAAC-AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCA 16105
| ||||| || | ||||| |||||||| ||||| || ||||| || |||| ||| |
Sbjct 2850921 A-CCCAAGCGCACCCAATAACCTATCCGCAACAAACTCAATATATTGACTCATCAAAACC 2850863
Query 16106 CAGTTCATTCCTATTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTA 16165
| ||||| || | || | || | ||| || | ||| | | ||||| |
Sbjct 2850862 CCATTCATCCCAACCAACGCACATGGAAGTGCGTCACAAACAAACTCCCTCTCTATCTCC 2850803
Query 16166 ACCGCTTCAATGATTATATCTCTTACTACACTATTTAACGGAGGGTTTAATAAGTGTTTA 16225
|| || ||| | || | | || || || | | || | ||| | | |||
Sbjct 2850802 ACAGCATCACGCACAATCCCCTTCAC-ACGCTCCT---CTGAAAGCTTATTCT-TCATTA 2850748
Query 16226 AACATTATA-----CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGT 16280
| | || | ||||| ||||||||||| | ||||| || | ||| |||||||
Sbjct 2850747 GAGAGTACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGT 2850688
Query 16281 TTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATG 16340
|||| || ||||| || ||||| || |||| || |||| ||| |||||||| ||
Sbjct 2850687 TTGAGAAGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGC 2850628
Query 16341 AACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTC 16400
||||| ||||| || |||||||| ||||| ||||| | |||||| || | | |
Sbjct 2850627 TTCCAGAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGAT- 2850569
Query 16401 TAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGT 16460
| | || || ||||| | ||||| | ||||| |||||| ||
Sbjct 2850568 --TCTGAACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTG 2850511
Query 16461 TCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTA 16520
| || | || | || ||| ||||| || ||| ||||| || || | |
Sbjct 2850510 TTTCAACCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAA 2850451
Query 16521 GTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATA-AAAGCAT 16579
| | ||| ||||| || ||||| ||||| || || || || || || || || ||||||
Sbjct 2850450 GGAGACTGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCA- 2850392
Query 16580 CTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATT 16639
| || || | | ||| | ||||| ||||||| | || | |||||| ||| ||
Sbjct 2850391 CGCGCCTCAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATA 2850332
Query 16640 CCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGAA 16699
|| || || || || || || || | |||||| | ||| | |||| || |
Sbjct 2850331 CCGTCAGAGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTG 2850272
Query 16700 AGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAA 16759
|| || ||||| | || | || | ||| || || || | ||||| |||||
Sbjct 2850271 AGGTTCTCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGAT 2850212
Query 16760 GCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATAGGAAACA 16811
|| | || || |||||||| | ||| || | ||| ||| |||||||
Sbjct 2850211 GCTTCGGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACA 2850160
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462433529057800
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