Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq8 105 5e-18 seq3 96.9 3e-15 >seq8 Length=25521646 Score = 105 bits (116), Expect = 5e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || || || ||| || || || || ||||||||||||||||| ||||| ||| Sbjct 24540632 CAGTTCTATGTAGCAAATGGGGAGTTATCCTGCCAAATGTATCAACGATCTGCTGACATG 24540573 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || |||||||| || || || |||||| |||||||||||| || | |||||||| ||| Sbjct 24540572 GGCCTGGGTGTGCCGTTTAACATTGCATCTTATGCGCTGCTGACATGCATGATTGCTCAT 24540513 Query 20551 GTT 20553 ||| Sbjct 24540512 GTT 24540510 >seq3 Length=30153019 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 20431 CAATTTTACGTTGCTAATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATG 20490 || || || || || ||| ||||| |||||||||||||| || |||| ||||| ||| Sbjct 25217101 CAGTTCTATGTAGCAAATGGGGAATTATCGTGTCAAATGTACCAGAGATCTGCTGACATG 25217042 Query 20491 GGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACAT 20550 || ||||| || || || ||||||||| |||||| || || || | |||||||| ||| Sbjct 25217041 GGCCTGGGCGTGCCATTTAATATTGCATCTTATGCCCTCCTGACATGCATGATTGCTCAT 25216982 Query 20551 GTT 20553 ||| Sbjct 25216981 GTT 25216979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399117966608485