Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2896 107 4e-18
seq11 96.9 7e-15
seq1 95.1 3e-14
>seq2896
Length=25968
Score = 107 bits (118), Expect = 4e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
||||| || || |||| |||| ||||||||| || |||| || |||||||| || ||
Sbjct 4234 GATTTTGACTATGATTATTTTGGTTTCAAAACTCTTGAGAGGTCCTATCTCCTGAAGGTT 4293
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
| || ||| | |||||| | |||||| ||| ||||| | || ||||| || ||||||
Sbjct 4294 CAAGGAAAGGTTGTGGAAAGGCCTCAGCATATGCTGATGAGGGTTGCTGTTGGAATTCAC 4353
Query 248929 AAGGATGACATAGA 248942
||||||||||||||
Sbjct 4354 AAGGATGACATAGA 4367
>seq11
Length=35963958
Score = 96.9 bits (106), Expect = 7e-15
Identities = 104/135 (77%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
|| || || || |||| ||||| ||||||||| || |||| || || ||| | || ||
Sbjct 31406230 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCTTGAAGGTT 31406289
Query 248869 GATGG-CAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA 248927
|| || |||| | || ||| || |||||||||||||||| | || |||| || |||||
Sbjct 31406290 GAAGGACAAGTT-GTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAATTCA 31406348
Query 248928 CAAGGATGACATAGA 248942
||||||| |||||||
Sbjct 31406349 CAAGGATAACATAGA 31406363
>seq1
Length=36457581
Score = 95.1 bits (104), Expect = 3e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868
|| || || || |||| ||||| ||||||||| || |||| || || || | || ||
Sbjct 33689655 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTGTTGAAGGTT 33689596
Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928
|| || || | || ||| || |||||||||||||||| | || |||| || ||||||
Sbjct 33689595 GAAGGAAAAGTTGTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAATTCAC 33689536
Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988
||||||||||| || | || | || ||| | |||| | | | ||| | ||
Sbjct 33689535 AAGGATGACATTGATTCTGCTGTCAAAACTTACCACCTAATGTCTCAGAGATGGTTCACT 33689476
Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020
||||| | || || || ||||| ||||| ||
Sbjct 33689475 CATGCATCTCCTACTCTATTCAATGCCGGAAC 33689444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073579667660864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |