Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq2896 107 4e-18 seq11 96.9 7e-15 seq1 95.1 3e-14 >seq2896 Length=25968 Score = 107 bits (118), Expect = 4e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 ||||| || || |||| |||| ||||||||| || |||| || |||||||| || || Sbjct 4234 GATTTTGACTATGATTATTTTGGTTTCAAAACTCTTGAGAGGTCCTATCTCCTGAAGGTT 4293 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 | || ||| | |||||| | |||||| ||| ||||| | || ||||| || |||||| Sbjct 4294 CAAGGAAAGGTTGTGGAAAGGCCTCAGCATATGCTGATGAGGGTTGCTGTTGGAATTCAC 4353 Query 248929 AAGGATGACATAGA 248942 |||||||||||||| Sbjct 4354 AAGGATGACATAGA 4367 >seq11 Length=35963958 Score = 96.9 bits (106), Expect = 7e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||||||| || |||| || || ||| | || || Sbjct 31406230 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTCTTGAAGGTT 31406289 Query 248869 GATGG-CAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCA 248927 || || |||| | || ||| || |||||||||||||||| | || |||| || ||||| Sbjct 31406290 GAAGGACAAGTT-GTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAATTCA 31406348 Query 248928 CAAGGATGACATAGA 248942 ||||||| ||||||| Sbjct 31406349 CAAGGATAACATAGA 31406363 >seq1 Length=36457581 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 248809 GATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATT 248868 || || || || |||| ||||| ||||||||| || |||| || || || | || || Sbjct 33689655 GACTTTGACTATGATTACTTTGGTTTCAAAACCCTTGAGAGGTCCTACCTGTTGAAGGTT 33689596 Query 248869 GATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCAC 248928 || || || | || ||| || |||||||||||||||| | || |||| || |||||| Sbjct 33689595 GAAGGAAAAGTTGTTGAAAGACCTCAGCACATGTTGATGAGGGTTTCTGTTGGAATTCAC 33689536 Query 248929 AAGGATGACATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACA 248988 ||||||||||| || | || | || ||| | |||| | | | ||| | || Sbjct 33689535 AAGGATGACATTGATTCTGCTGTCAAAACTTACCACCTAATGTCTCAGAGATGGTTCACT 33689476 Query 248989 CATGCCACACCGACGCTCTTCAACGCCGGTAC 249020 ||||| | || || || ||||| ||||| || Sbjct 33689475 CATGCATCTCCTACTCTATTCAATGCCGGAAC 33689444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073579667660864