Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq9 183 3e-41 seq11 152 5e-32 seq2 109 5e-19 >seq9 Length=21753712 Score = 183 bits (202), Expect = 3e-41 Identities = 565/855 (66%), Gaps = 23/855 (3%) Strand=Plus/Plus Query 13913 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13972 ||||||||||| | ||| || || |||||||| ||||| || |||| || || || | Sbjct 19303629 TTTTGATATTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATCAGT 19303688 Query 13973 TCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 14031 ||||| ||||||| || || | || | | |||| || |||| || || | | Sbjct 19303689 TCCATCCAATCAAAAGGGTTC-TGCACTTCATACACCTTCCCACACCCAAGCGCACCCAA 19303747 Query 14032 TAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 14091 ||| |||||||||| ||||| ||||| ||| ||| ||| | | |||||| || | | Sbjct 19303748 TAACCTATCCGCAACAAACTCTATATACTGACTCATCAAAACCCCATTCATTCCCACCAA 19303807 Query 14092 TTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 ||| |||| | | ||| ||| | || || ||| || || | || Sbjct 19303808 CGC-ACATGGAAGCGCGTCACACACAAACTCTCTCTCGATCTCCACTGCGTCACGAACAA 19303866 Query 14151 TAATCGTAATAATTTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 14207 | | | | | || | | |||| | || ||||| | || || |||||| | Sbjct 19303867 TTCCCTTCACACGCTCCTCTGGAAGCTTCTTCTTCATTAGA-GAGTATAA--TAAACAAG 19303923 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 | |||||||||||||| || ||||||| || | ||||| || ||||| | || | Sbjct 19303924 CGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTAAGACCGG 19303983 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 |||| || || |||||||| | ||||||||| ||| ||| ||| || || ||||||| Sbjct 19303984 GCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAAAATATTC 19304043 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14387 | ||||| |||||| || | | |||||| | || ||| || | ||| |||| Sbjct 19304044 CTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCG-TCG--ATCC 19304100 Query 14388 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447 || | |||||||||| ||| ||| ||| | || || |||||||| || | |||| Sbjct 19304101 ATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCGTGGAATA 19304160 Query 14448 AATGTTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14505 | | | || || ||| ||| || ||||| || | ||| | ||||||||| || Sbjct 19304161 ATCGGTTTTTATCAGCGGAGTCTTTG--ATATATGTTTCGAGAAGGAGGCTATACATCTC 19304218 Query 14506 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14565 |||||| || ||||| || || || || || || || ||| | || || | ||| Sbjct 19304219 AGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGCGACTTG 19304278 Query 14566 TACCTCTGAGTAA--AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 | | ||||| | || ||| |||| | |||||| ||| || || || || || Sbjct 19304279 AA--TTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCGGCG 19304336 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCG 14683 || || || | |||| ||| || |||| | || || | | |||| | ||||| | Sbjct 19304337 AAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATCCCAAT-G 19304395 Query 14684 GCTAA-ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTT 14742 || || ||| | ||||||||| ||||| || | ||||| || ||| | ||||| || Sbjct 19304396 GCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCTTTCTT 19304455 Query 14743 ATACATTACCCATAT 14757 |||||| |||| || Sbjct 19304456 GTACATTTCCCAGAT 19304470 >seq11 Length=35963958 Score = 152 bits (168), Expect = 5e-32 Identities = 555/857 (65%), Gaps = 25/857 (3%) Strand=Plus/Minus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||| ||||| |||| ||| || || |||||||| ||||| || |||| || || || Sbjct 2851025 TTTCTGATAATCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATTAG 2850966 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 14030 |||||| ||||||| || || | |||| | |||| ||| |||| || || | | Sbjct 2850965 TTCCATCCAATCAAACGGGTTC-TGCACATCATACACCTTACCACACCCAAGCGCACCCA 2850907 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 ||| |||||||||| ||||||||||||||| ||| ||| | | |||||| || | | Sbjct 2850906 ATAACCTATCCGCAACAAACTCAATATATTGACTCATCAAAACCCCATTCATCCCAACCA 2850847 Query 14091 GTTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 14149 ||| |||| | | | ||| || | ||||| |||||| || | | Sbjct 2850846 -ACGCACATGGAAGTGCGTCACAAACAAACTCCCTCTCTATCTCCACAGCATCACGCACA 2850788 Query 14150 ATAATCGTAATAATTTCATTAGAAGGAGGATATT-----TTAGATGTTTAAAAATTAAAC 14204 || | | | | || | ||| || |||| ||||| | || || || | Sbjct 2850787 ATCCCCTTCACACGCTCCTCTGAA--AGCTTATTCTTCATTAGA-GAGTACAA--CAAGC 2850733 Query 14205 ACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATC 14264 | || |||||||||||||| || ||||||| || | |||||||| || || | || Sbjct 2850732 AAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTC 2850673 Query 14265 CTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATA 14324 | ||||| | |||| || || | ||| ||||| ||| ||| ||| || ||||| | Sbjct 2850672 CAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAA 2850613 Query 14325 TTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT- 14383 |||| ||||| ||||||||| | | || || | || || || || | || Sbjct 2850612 TTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGA-----TTCTGAACCATC 2850558 Query 14384 -ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14442 ||||| | ||||| |||| ||| | || | || |||||||||| || | Sbjct 2850557 GATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAACCGCGTG 2850498 Query 14443 AAATAAATGTTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14500 || ||| | | || || | | |||| || ||||| |||| ||| | || ||| Sbjct 2850497 GAACAAACGGTTTTTATCAGCCGAATCCTTG--ATATATGTTTCAAGAAGGAGACTGTAC 2850440 Query 14501 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14560 || ||||| || || ||||| ||||| || || || || || ||| | || || | Sbjct 2850439 ATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGCG 2850380 Query 14561 CATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14620 ||| | || | ||| ||| |||| | |||||| ||| ||||| ||| || Sbjct 2850379 ACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGGCG 2850320 Query 14621 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAA 14680 || || || || | | || ||| | ||||| | || | | | |||| || | ||| Sbjct 2850319 GCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCCAG 2850260 Query 14681 TCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTT 14740 | | | |||| ||||||||| ||||| || | ||||| ||| || | ||||| Sbjct 2850259 TGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCTTTC 2850200 Query 14741 TTATACATTACCCATAT 14757 |||||||| |||| || Sbjct 2850199 TTATACATCTCCCAGAT 2850183 >seq2 Length=24697652 Score = 109 bits (120), Expect = 5e-19 Identities = 540/850 (64%), Gaps = 11/850 (1%) Strand=Plus/Plus Query 13912 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13971 ||| || ||||||| ||| || || |||||||| ||||| || || | || || || Sbjct 21046621 TTTCTGGTATTCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCCTGAAGCGAAATCAA 21046680 Query 13972 TTCCATAAAATCAAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 14030 |||||| ||||||| || ||| | |||| | |||| || |||| || || | | Sbjct 21046681 TTCCATCCAATCAAAAGGGTTT-TGCACATCATACACCTTCCCACACCCAAGCGCACCCA 21046739 Query 14031 GTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 14090 ||| ||||| || | |||||||||||||||| ||| ||| | | |||||| || | | Sbjct 21046740 ATAACCTATCAGCTACGAACTCAATATATTGACTCATCAAACCCCCATTCATCCCCACCA 21046799 Query 14091 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 14150 |||| | | ||| || | ||||| || || || | || Sbjct 21046800 ACGCGCATGGAAGCGCGTCACACACAAACTCCCTCTCTATTTCAACCGCATCACGCACAA 21046859 Query 14151 TAATCGTAATAATTTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 14207 | | | | || | | |||| |||| ||||| | || || || |||| Sbjct 21046860 TCCCCTTCACGCGCTCTTCTGGAAGCTTCTTATTCATTAGA-GAGTACAA--CAAGCACG 21046916 Query 14208 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 14267 | |||||||| || | |||||||||| || | |||||||| || || | || | Sbjct 21046917 CGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAG 21046976 Query 14268 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 14327 |||| | |||||||| || ||||||||||| ||| ||| ||| || ||||| || | Sbjct 21046977 GCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATAC 21047036 Query 14328 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14387 | ||||| ||||||||| | | ||||| | || ||| || | ||| |||| Sbjct 21047037 CTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGATTCTGAACCG-TCG--ATCC 21047093 Query 14388 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447 | ||||| |||| |||||| || || || || || || || | |||| Sbjct 21047094 AACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCTATTGCGTGGAATA 21047153 Query 14448 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14507 | | | || || | | | || || || |||| ||| | |||||||| |||| Sbjct 21047154 ATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGACTATACATCTCAG 21047213 Query 14508 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14567 | || || || || || || ||||| || || || || | || || | ||||| Sbjct 21047214 AATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCCTCAGCGACTTGTA 21047273 Query 14568 CCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14627 ||||| || ||| |||| | |||||| || || || || ||| || || | Sbjct 21047274 TCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGAAGA 21047333 Query 14628 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTA 14687 | || | |||| ||| || |||| | || | | | |||| | ||| | | | Sbjct 21047334 AAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGA 21047393 Query 14688 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACA 14747 ||| | ||| ||||| ||||| || | ||||| || ||| | |||||||| |||| Sbjct 21047394 GATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGTACA 21047453 Query 14748 TTACCCATAT 14757 || |||| || Sbjct 21047454 TTTCCCAGAT 21047463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482263764039640