Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq9 172 7e-38
seq11 170 2e-37
seq2 163 4e-35
seq1 111 2e-19
>seq9
Length=21753712
Score = 172 bits (190), Expect = 7e-38
Identities = 407/610 (67%), Gaps = 10/610 (2%)
Strand=Plus/Plus
Query 33579 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTG 33638
||||| |||||||| || || || || || |||| || || ||||| || || ||
Sbjct 19303917 AAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTA 19303976
Query 33639 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAG 33698
|| |||||||||| || || ||||||||||||||||| | | ||| ||| || ||
Sbjct 19303977 AGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAA 19304036
Query 33699 AAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG--TCAT 33756
|| |||||||| || |||||| |||| || | ||| | | | ||| | |
Sbjct 19304037 AATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGC--GAAGGATTCTGAACCGT 19304094
Query 33757 GTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 33816
||||| | ||||| || || |||||| | |||||||| || ||||| || || |
Sbjct 19304095 CGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCGT 19304154
Query 33817 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 33876
|| | |||||| ||| ||||| | ||| || |||| | || |||||||
Sbjct 19304155 GGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCTATACA 19304214
Query 33877 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 33936
| || || || || ||||||||||| || || || ||||||||| | ||||| | |
Sbjct 19304215 TCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGCGA 19304274
Query 33937 TCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTG 33996
|| | || || || | | | || | |||||| || ||||| || ||| |
Sbjct 19304275 CTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCGG 19304334
Query 33997 CAAAAAACGCCAATACATGTTTTATAAAAT---ATTTTTCGTCTGGTGTTAGTTTATTCC 34053
| || || || | | ||||| || || | || ||||| |||| || || ||
Sbjct 19304335 CGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTC-GGTG--AGAGAATCCC 19304391
Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113
||| | ||||| ||| | ||| |||||||| | ||||| ||||| || || || |
Sbjct 19304392 AATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCTT 19304451
Query 34114 TTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGAT 34173
| || ||||| | |||||| | | | ||||||||||| || || || | || ||| |
Sbjct 19304452 TCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACATGCAGAAACGATCTGGGT 19304511
Query 34174 TTGGTGCAAG 34183
|||| || ||
Sbjct 19304512 TTGGAGCCAG 19304521
>seq11
Length=35963958
Score = 170 bits (188), Expect = 2e-37
Identities = 406/612 (66%), Gaps = 4/612 (1%)
Strand=Plus/Minus
Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633
||| ||| || |||||||| || || || || || |||| || || ||||| || |
Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682
Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693
| || ||||| ||||| || || | ||| |||||||| ||||| | | ||| ||| |
Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAG 2850622
Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33753
| ||||| |||||||| || |||||| |||| ||| | ||| | | | |||
Sbjct 2850621 AGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAG--GATTCTGA 2850564
Query 33754 --CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
||| ||||| | ||||| || || ||| | |||||||| || ||||| |
Sbjct 2850563 ACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAAC 2850504
Query 33812 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 33871
|| | || | | |||||| ||| ||| || | ||| || || | | |||||
Sbjct 2850503 CGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGACT 2850444
Query 33872 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 33931
||||| || ||||| || |||||||| || || || |||||||||||| | |||||
Sbjct 2850443 GTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTC 2850384
Query 33932 GGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACT 33991
| | || | ||| || ||| | | | || | |||||| || || || |||
Sbjct 2850383 AGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGA 2850324
Query 33992 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 34051
||| || || || || | || ||||| | ||| | |||| | || || || |
Sbjct 2850323 GGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTC 2850264
Query 34052 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 34111
||| | || || | ||| | ||| ||||| || | ||||| || ||||| || ||
Sbjct 2850263 CCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGC 2850204
Query 34112 CTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGG 34171
|| |||||||| | |||||| | | | ||||| ||||| || || ||| | | |||
Sbjct 2850203 TTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATGCAAAAACGGTCTGG 2850144
Query 34172 ATTTGGTGCAAG 34183
|||||| || ||
Sbjct 2850143 ATTTGGAGCCAG 2850132
Score = 95.1 bits (104), Expect = 2e-14
Identities = 145/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722
|| || ||||| || | |||||||| || || || |||||| | | || | |||| |
Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382
Query 63723 TACGTCTCAATAGCTGAGTCTAT---ATCCCATTGATGAATTCCTACTGCGACACGCATT 63779
|| || | | ||| || ||||| |||| ||| |||||||| || | || | |||
Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCC--TTG-TGAATTCCAACAGAAACCCTCATC 31406325
Query 63780 AACATGTGCTGAGGTCTTTCAACAATTTTGTTGTT-TATTTTCAACAAGTAGGATTTTTC 63838
||||||||||||||||||||||||| |||| || | ||||| | |||||| | ||
Sbjct 31406324 AACATGTGCTGAGGTCTTTCAACAA-CTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTC 31406266
Query 63839 CAAAGTTTTAAAACCAAAATA 63859
| ||||| |||||||| ||
Sbjct 31406265 AAGGGTTTTGAAACCAAAGTA 31406245
>seq2
Length=24697652
Score = 163 bits (180), Expect = 4e-35
Identities = 412/622 (66%), Gaps = 6/622 (1%)
Strand=Plus/Plus
Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633
||| ||| || |||||||| ||||| | |||||| |||| ||||| ||||| || |
Sbjct 21046905 ACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 21046964
Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693
| || || || ||||| ||||| || || || | ||||||||| | | ||| ||| |
Sbjct 21046965 AGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAG 21047024
Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33753
| ||||| || ||||| || |||||| |||| || | || | | | |||
Sbjct 21047025 AGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAG--GATTCTGA 21047082
Query 33754 CATGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 33811
|| ||||| | ||||| || || || || || ||||| ||||| |||||
Sbjct 21047083 ACCGTCGATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCTAT 21047142
Query 33812 GGCATTAAAGAGATAGtttttt-tCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870
|| | || | || | ||||| ||| |||||| | ||| || || | | ||||
Sbjct 21047143 TGCGTGGAATA-ATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGAC 21047201
Query 33871 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33930
||||||| || ||||| || || || || || ||||| || |||||||| | ||||
Sbjct 21047202 TATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCCT 21047261
Query 33931 CGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCAC 33990
| | | || | ||||| || | | | || | |||||| || ||||| ||
Sbjct 21047262 CAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGG 21047321
Query 33991 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 34050
|| || || || || | | ||||| || || | |||| | || || |
Sbjct 21047322 AAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGT 21047381
Query 34051 TCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTG 34110
||| | || ||||| ||| | ||| |||||||| | ||||| ||||| || ||||
Sbjct 21047382 CCCAGTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTG 21047441
Query 34111 CCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTG 34170
| ||||| ||||| | |||||| | | | |||||||||||||| || || | || |
Sbjct 21047442 CTTTTTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGGAACATGCAGAAACGATCAG 21047501
Query 34171 GATTTGGTGCAAGGATAGGTTC 34192
| ||||| ||||| | ||||||
Sbjct 21047502 GGTTTGGAGCAAGAAGAGGTTC 21047523
>seq1
Length=36457581
Score = 111 bits (122), Expect = 2e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722
||||| ||||| |||| |||||||| || || || |||||| | | ||| | ||| | |
Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503
Query 63723 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 63781
|| || | | ||| || || || || | ||| |||||||| || | || | ||| ||
Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACCCTCATCAA 33689562
Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841
||||||||||||||||||||||| ||| | | ||||||| |||||| | || |
Sbjct 33689563 CATGTGCTGAGGTCTTTCAACAACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAAG 33689622
Query 63842 AGTTTTAAAACCAAAATA 63859
||||| |||||||| ||
Sbjct 33689623 GGTTTTGAAACCAAAGTA 33689640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629710743571440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |