Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 seq2896 86.0 6e-12 >seq9 Length=21753712 Score = 109 bits (120), Expect = 5e-19 Identities = 240/356 (67%), Gaps = 4/356 (1%) Strand=Plus/Plus Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 |||||| || ||||||||||| | ||||| |||| ||| | || || || ||||| Sbjct 19303916 TAAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGT 19303975 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 | |||||||| || || |||||||| | ||||||||| ||| || ||||| || Sbjct 19303976 AAGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAA 19304035 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCT-CCATATACCTTGTTGC-TA 11803 |||||||| || || ||||| || || | | |||| | | | || | | Sbjct 19304036 AAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCGTC 19304095 Query 11804 GATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCG 11863 | |||||| | ||||| |||||||||||| | || || || ||||| || ||| Sbjct 19304096 G--ATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCG 19304153 Query 11864 TTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATAC 11923 | ||||| | |||| || ||| | | |||||| || | | | |||||| Sbjct 19304154 TGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCTATAC 19304213 Query 11924 ATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 || || || || |||||||| || || ||||| || || |||||| || ||||| Sbjct 19304214 ATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTC 19304269 >seq2896 Length=25968 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 37171 TATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGAT 37230 || ||||| |||||||||||||| |||||||||||| | || || |||||| Sbjct 6741 TAGATATTTGAAGTATATGGTTCAAAACACTCATTATTACCAAGAATCTGGCTAGTAGAT 6682 Query 37231 GCAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTT 37290 ||||||||||| || || | ||||| |||||||| |||| | | || |||| Sbjct 6681 GCAGTAGGCATAGGGGCAACAAGAAGTGAATTTCTCACACCATTTTTTAATATCCTCTCC 6622 Query 37291 TTTAGTTCATTCCAATCCCA 37310 ||||| ||||||||||||| Sbjct 6621 CTTAGTGCATTCCAATCCCA 6602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468445308911120