Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq11 187 3e-42
seq9 167 3e-36
seq1 105 9e-18
seq2896 104 3e-17
>seq11
Length=35963958
Score = 187 bits (206), Expect = 3e-42
Identities = 398/588 (68%), Gaps = 10/588 (2%)
Strand=Plus/Minus
Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209
||| ||| || |||||||| || || || || || |||| || || ||||| || |
Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682
Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGAT-CCA 36268
| || ||||| ||||| || || | ||| |||||||| ||||| | | || | | | |||
Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAG-CACAGAAGCTTCCA 2850623
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328
|| |||||||||||||| || ||||| |||| ||| | ||| | | | |||
Sbjct 2850622 GAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAG--GATTCTG 2850565
Query 36329 T--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386
||| ||||| | ||||| || || ||| | |||||||| ||||| || |
Sbjct 2850564 AACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAA 2850505
Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446
|| | || | | |||||| ||| ||| || | |||||| |||| | ||||
Sbjct 2850504 CCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGAC 2850445
Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506
| ||||| || ||||| || |||||||| || ||||| |||||||||||| | ||||
Sbjct 2850444 TGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCT 2850385
Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566
| | | || | ||| || ||| | | | || | |||||| || || ||||||
Sbjct 2850384 CAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAG 2850325
Query 36567 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCG--TTTGGTGTTAGTTT 36624
||| || || || || | || ||||| | ||| | |||| | |||| || ||
Sbjct 2850324 AGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTG--AGGTT 2850267
Query 36625 ATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTC 36684
| ||| | || || | ||| | ||| ||||| || | ||||| || ||||| ||
Sbjct 2850266 CTCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTC 2850207
Query 36685 TGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 36732
|| || |||||||| | |||||| | | | |||||||||||||| ||
Sbjct 2850206 GGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACAT 2850159
Score = 95.1 bits (104), Expect = 2e-14
Identities = 145/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515
|| || ||||| || | |||||||| || || || |||||| | | || | |||| |
Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382
Query 66516 TACGTCTCAATAGCTGAGTCTAT---ATCCCATTGATGAATTCCTACTGCGACACGCATT 66572
|| || | | ||| || ||||| |||| ||| |||||||| || | || | |||
Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCC--TTG-TGAATTCCAACAGAAACCCTCATC 31406325
Query 66573 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT-TATTTTCAACAAGTAGGATTTTTC 66631
||||||||||||||||||||||| | ||||| || | ||||| | |||||| | ||
Sbjct 31406324 AACATGTGCTGAGGTCTTTCAAC-AACTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTC 31406266
Query 66632 CAAAGTTTTAAAACCAAAATA 66652
| ||||| |||||||| ||
Sbjct 31406265 AAGGGTTTTGAAACCAAAGTA 31406245
Score = 93.3 bits (102), Expect = 6e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
||| || ||||| | || | ||| || | |||| |||| | || |||||||| ||||||
Sbjct 31406825 TCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCAGCATTGGAACAATACC 31406766
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334
||||||||| ||||| || || ||| || || || | || || || || || ||
Sbjct 31406765 ATTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTCGGATGTTGTGAACAGA 31406706
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
| ||| ||||| || || ||| ||| || || || || |||||||| ||
Sbjct 31406705 AACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCTTCAAAGTATCATATAT 31406646
Query 66395 GCCCTCTATACTATCATCCATCAT 66418
||||||||||||||||| ||||
Sbjct 31406645 TCCCTCTATACTATCATCTTTCAT 31406622
>seq9
Length=21753712
Score = 167 bits (184), Expect = 3e-36
Identities = 391/584 (67%), Gaps = 12/584 (2%)
Strand=Plus/Plus
Query 36155 AAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTG 36214
||||| |||||||| || || || || || |||| || || ||||| || || ||
Sbjct 19303917 AAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTA 19303976
Query 36215 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCAGAAAA 36273
|| |||||||||| || || ||||||||||||||||| | | || || |||||| ||
Sbjct 19303977 AGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCG-CACAGAAGCTTCCAGAGAA 19304035
Query 36274 GAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC---ATAACCGGCACTGTC 36330
|| |||||||| || ||||| |||| || | ||| | | | | || |||
Sbjct 19304036 AAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCGTC 19304095
Query 36331 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGC 36390
||||| | ||||| || || |||||| | |||||||| || || || || ||
Sbjct 19304096 ---GATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGC 19304152
Query 36391 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATA 36450
| || | |||||| ||| ||||| | |||||| || | | || |||||
Sbjct 19304153 GTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCTATA 19304212
Query 36451 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGT 36510
||| || || || || ||||||||||| ||||| || ||||||||| | ||||| |
Sbjct 19304213 CATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGC 19304272
Query 36511 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 36570
| || | || || || | | | || | |||||| || |||||||| |||
Sbjct 19304273 GACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGC 19304332
Query 36571 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTGTTAGTTTATTC 36628
|| || || || | | ||||| || || | ||| | | |||| || || |
Sbjct 19304333 GGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTG--AGAGAATCC 19304390
Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688
|||| | ||||| ||| | ||| |||||||| | ||||| ||||| || || ||
Sbjct 19304391 CAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCT 19304450
Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAAT 36732
|| || ||||| | |||||| | | | ||||| |||||||| ||
Sbjct 19304451 TTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACAT 19304494
>seq1
Length=36457581
Score = 105 bits (116), Expect = 9e-18
Identities = 146/199 (73%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 66456 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 66515
||||| ||||| |||| |||||||| || || || |||||| | | ||| | ||| | |
Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503
Query 66516 TACGTCTCAATAGCTGAGTCTATATCC-CATTGATGAATTCCTACTGCGACACGCATTAA 66574
|| || | | ||| || || || || | ||| |||||||| || | || | ||| ||
Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACCCTCATCAA 33689562
Query 66575 CATGTGCTGAGGTCTTTCAACGATCTTGTTGTT-TATTTTCAACAAGTAGGATTTTTCCA 66633
||||||||||||||||||||| | ||| | || | ||||||| |||||| | || |
Sbjct 33689563 CATGTGCTGAGGTCTTTCAAC-AACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAA 33689621
Query 66634 AAGTTTTAAAACCAAAATA 66652
||||| |||||||| ||
Sbjct 33689622 GGGTTTTGAAACCAAAGTA 33689640
Score = 93.3 bits (102), Expect = 6e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
||| |||||||| | || | || || | ||| | || | || |||||||| ||||||
Sbjct 33689079 TCCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCAGCATTGGAACAATACC 33689138
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334
||||||||| ||||| || || || || || || | |||||||| || || ||
Sbjct 33689139 ATTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCACGAATGTTGTGAACAGA 33689198
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
| ||| ||||| || || ||| |||| || || || || |||||||| ||
Sbjct 33689199 AACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCTTCAAAGTATCATATAT 33689258
Query 66395 GCCCTCTATACTATCATCCATCAT 66418
||||||||||||||||| ||||
Sbjct 33689259 TCCCTCTATACTATCATCTTTCAT 33689282
>seq2896
Length=25968
Score = 104 bits (114), Expect = 3e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 66215 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 66274
||| || ||||| | || | || || | ||| | || | || |||||||||||| ||
Sbjct 4779 TCCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCAGCATTGGAATAATGCC 4720
Query 66275 ATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGA 66334
||||||||| ||||| ||||| || || || || | ||||||||||| || ||
Sbjct 4719 ATTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 4660
Query 66335 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 66394
| ||| ||||| || || |||| ||| | || || ||| || || ||||| ||
Sbjct 4659 GACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCTTTCAAAGTTTCATATAT 4600
Query 66395 GCCCTCTATACTATCATCCATCATG 66419
||||||||||||||||| |||||
Sbjct 4599 ACCCTCTATACTATCATCTTTCATG 4575
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658061132757320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |