Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq9 172 5e-38 seq11 150 2e-31 seq2 93.3 4e-14 >seq9 Length=21753712 Score = 172 bits (190), Expect = 5e-38 Identities = 565/857 (66%), Gaps = 27/857 (3%) Strand=Plus/Plus Query 13581 TTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTT 13640 ||||||||||| | ||| || || |||||||| ||||| || |||| || || || | Sbjct 19303629 TTTTGATATTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATCAGT 19303688 Query 13641 TCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATAG 13699 ||||| ||||||| || || | || | | |||| || |||| || || | | Sbjct 19303689 TCCATCCAATCAAAAGGGTTC-TGCACTTCATACACCTTCCCACACCCAAGCGCACCCAA 19303747 Query 13700 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13759 ||| ||||| |||| |||||| ||||| ||| ||| ||| | | |||||| || | | Sbjct 19303748 TAACCTATCCGCAACAAACTCTATATACTGACTCATCAAAACCCCATTCATTCCCACCAA 19303807 Query 13760 TTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 ||| |||| | | ||| ||| | || || ||| || || | || Sbjct 19303808 CGC-ACATGGAAGCGCGTCACACACAAACTCTCTCTCGATCTCCACTGCGTCACGAACAA 19303866 Query 13819 TAATTGTAATAATCTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 13875 | | | | ||| | | |||| | || ||||| | || || |||||| | Sbjct 19303867 TTCCCTTCACACGCTCCTCTGGAAGCTTCTTCTTCATTAGA-GAGTATAA--TAAACAAG 19303923 Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 | |||||||||||||| || ||||||| || | ||||| || ||||| | || | Sbjct 19303924 CGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTAAGACCGG 19303983 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTC 13995 |||| || || |||||||| | ||||||||| ||| || || || || ||||||| Sbjct 19303984 GCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAAAATATTC 19304043 Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14055 | ||||| |||||| || | | |||||| | || ||| || | ||| |||| Sbjct 19304044 CTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCG-TCG--ATCC 19304100 Query 14056 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14115 || | |||||||||| ||| ||| ||| | || || |||||||| || | |||| Sbjct 19304101 ATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCGTGGAATA 19304160 Query 14116 AATATTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 14173 | | || || ||| ||| || ||||| || | ||| | ||||||||| || Sbjct 19304161 ATCGGTTTTTATCAGCGGAGTCTTTG--ATATATGTTTCGAGAAGGAGGCTATACATCTC 19304218 Query 14174 AGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAAGCATCTAGCTTC--CGACCA 14230 |||||| || ||||| || || || || || || || |||||| | || || |||| Sbjct 19304219 AGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCA-CGCGCCTCAGCGAC-- 19304275 Query 14231 TTGTACTTCCGAGTAA--AATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCT 14288 ||| | || |||| | || ||| |||| | |||||| ||| || || || || Sbjct 19304276 TTGAATTT--GAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCG 19304333 Query 14289 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAA 14348 || || || || | |||| ||| || |||| | || || | | |||| | |||| Sbjct 19304334 GCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATCCCAA 19304393 Query 14349 TCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTT 14408 | | | ||| | ||||||||| ||||| || | ||||| || ||| | ||||| Sbjct 19304394 TGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCTTTC 19304453 Query 14409 TTATACATTACCCATAT 14425 || |||||| |||| || Sbjct 19304454 TTGTACATTTCCCAGAT 19304470 >seq11 Length=35963958 Score = 150 bits (166), Expect = 2e-31 Identities = 559/860 (65%), Gaps = 31/860 (4%) Strand=Plus/Minus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||| ||||| |||| ||| || || |||||||| ||||| || |||| || || || Sbjct 2851025 TTTCTGATAATCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATTAG 2850966 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13698 |||||| ||||||| || || | |||| | |||| ||| |||| || || | | Sbjct 2850965 TTCCATCCAATCAAACGGGTTC-TGCACATCATACACCTTACCACACCCAAGCGCACCCA 2850907 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 ||| ||||| |||| |||||||||||||||| ||| ||| | | |||||| || | | Sbjct 2850906 ATAACCTATCCGCAACAAACTCAATATATTGACTCATCAAAACCCCATTCATCCCAACCA 2850847 Query 13759 GTTTTACA-GGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817 ||| |||| | | | ||| || | ||||| |||||| || | | Sbjct 2850846 -ACGCACATGGAAGTGCGTCACAAACAAACTCCCTCTCTATCTCCACAGCATCACGCACA 2850788 Query 13818 ATAATTGTAATAATCTCATTAGAAGGAGGATATT-----TTAGATGTTTAAAAATTAAAC 13872 || | | | ||| | ||| || |||| ||||| | || || || | Sbjct 2850787 ATCCCCTTCACACGCTCCTCTGAA--AGCTTATTCTTCATTAGA-GAGTACAA--CAAGC 2850733 Query 13873 ACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATC 13932 | || |||||||||||||| || ||||||| || | |||||||| || || | || Sbjct 2850732 AAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTC 2850673 Query 13933 CTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATA 13992 | ||||| | |||| || || | ||| ||||| ||| || || || ||||| | Sbjct 2850672 CAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAA 2850613 Query 13993 TTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT- 14051 |||| ||||| ||||||||| | | || || | || || || || | || Sbjct 2850612 TTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGA-----TTCTGAACCATC 2850558 Query 14052 -ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATT 14110 ||||| | ||||| |||| ||| | || | || |||||||||| || | Sbjct 2850557 GATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAACCGCGTG 2850498 Query 14111 AAATAAATATTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 14168 || ||| | || || | | |||| || ||||| |||| ||| | || ||| Sbjct 2850497 GAACAAACGGTTTTTATCAGCCGAATCCTTG--ATATATGTTTCAAGAAGGAGACTGTAC 2850440 Query 14169 ATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAAGCATCTAGCTTC--C 14225 || ||||| || || ||||| ||||| || || || || || |||||| | || || | Sbjct 2850439 ATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCA-CGCGCCTCAGC 2850381 Query 14226 GACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTA 14285 ||| ||| | ||| | ||| ||| |||| | |||||| ||| ||||| ||| Sbjct 2850380 GAC--TTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAG 2850323 Query 14286 GCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTC 14345 || || || || || | | || ||| | ||||| | || | | | |||| || | | Sbjct 2850322 GCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCC 2850263 Query 14346 CAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCT 14405 || | | | |||| ||||||||| ||||| || | ||||| ||| || | ||| Sbjct 2850262 CAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCT 2850203 Query 14406 TTTTTATACATTACCCATAT 14425 || |||||||| |||| || Sbjct 2850202 TTCTTATACATCTCCCAGAT 2850183 >seq2 Length=24697652 Score = 93.3 bits (102), Expect = 4e-14 Identities = 541/853 (63%), Gaps = 17/853 (2%) Strand=Plus/Plus Query 13580 TTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATT 13639 ||| || ||||||| ||| || || |||||||| ||||| || || | || || || Sbjct 21046621 TTTCTGGTATTCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCCTGAAGCGAAATCAA 21046680 Query 13640 TTCCATAAAATCAAATGGATTTATTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13698 |||||| ||||||| || ||| | |||| | |||| || |||| || || | | Sbjct 21046681 TTCCATCCAATCAAAAGGGTTT-TGCACATCATACACCTTCCCACACCCAAGCGCACCCA 21046739 Query 13699 GTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13758 ||| |||||||| | ||||||||||||||| ||| ||| | | |||||| || | | Sbjct 21046740 ATAACCTATCAGCTACGAACTCAATATATTGACTCATCAAACCCCCATTCATCCCCACCA 21046799 Query 13759 GTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAA 13818 |||| | | ||| || | ||||| || || || | || Sbjct 21046800 ACGCGCATGGAAGCGCGTCACACACAAACTCCCTCTCTATTTCAACCGCATCACGCACAA 21046859 Query 13819 TAATTGTAATAATCTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 13875 | | | ||| | | |||| |||| ||||| | || || || |||| Sbjct 21046860 TCCCCTTCACGCGCTCTTCTGGAAGCTTCTTATTCATTAGA-GAGTACAA--CAAGCACG 21046916 Query 13876 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13935 | |||||||| || | |||||||||| || | |||||||| || || | || | Sbjct 21046917 CGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAG 21046976 Query 13936 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTC 13995 |||| | |||||||| || ||||||||||| ||| || || || ||||| || | Sbjct 21046977 GCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATAC 21047036 Query 13996 CCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCC 14055 | ||||| ||||||||| | | ||||| | || ||| || | ||| |||| Sbjct 21047037 CTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGATTCTGAACCG-TCG--ATCC 21047093 Query 14056 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14115 | ||||| |||| |||||| || || || || || || || | |||| Sbjct 21047094 AACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCTATTGCGTGGAATA 21047153 Query 14116 AATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175 | | || || | | | || || || |||| ||| | |||||||| |||| Sbjct 21047154 ATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGACTATACATCTCAG 21047213 Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATA-AAAGCATCTAGCTTC--CGACCATT 14232 | || || || || || || ||||| || || || || ||| | || || |||| || Sbjct 21047214 AATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCA-CGCGCCTCAGCGAC--TT 21047270 Query 14233 GTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAA 14292 ||| || | || ||| |||| | |||||| || || || || ||| || | Sbjct 21047271 GTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGA 21047330 Query 14293 AAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGG 14352 | || || | |||| ||| || |||| | || | | | |||| | ||| | | Sbjct 21047331 AGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGC 21047390 Query 14353 ATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTAT 14412 | ||| | ||| ||||| ||||| || | ||||| || ||| | |||||||| | Sbjct 21047391 GGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGT 21047450 Query 14413 ACATTACCCATAT 14425 ||||| |||| || Sbjct 21047451 ACATTTCCCAGAT 21047463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479646608148200