Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq9 183 3e-41 seq11 158 1e-33 seq2 118 1e-21 >seq9 Length=21753712 Score = 183 bits (202), Expect = 3e-41 Identities = 564/855 (66%), Gaps = 23/855 (3%) Strand=Plus/Plus Query 13369 TTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTT 13428 ||||||||||| | ||| || || ||||| || ||||| || |||| || || || | Sbjct 19303629 TTTTGATATTCCCCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATCAGT 19303688 Query 13429 TCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATAA 13487 ||||| |||| || || || | || | | |||| || |||| || || | || Sbjct 19303689 TCCATCCAATCAAAAGGGTTC-TGCACTTCATACACCTTCCCACACCCAAGCGCACCCAA 19303747 Query 13488 TAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAG 13547 ||| ||||| |||| |||||| ||||| ||| ||| ||| | | |||||| || | | Sbjct 19303748 TAACCTATCCGCAACAAACTCTATATACTGACTCATCAAAACCCCATTCATTCCCACCAA 19303807 Query 13548 TTTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 ||| |||| | | | ||| ||| | || || ||| || || | || Sbjct 19303808 CGC-ACATGGAAGCGCGTCACACACAAACTCTCTCTCGATCTCCACTGCGTCACGAACAA 19303866 Query 13607 TAATCTTAATAATGTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 13663 | ||| | | || | | |||| | || ||||| | || || |||||| | Sbjct 19303867 TTCCCTTCACACGCTCCTCTGGAAGCTTCTTCTTCATTAGA-GAGTATAA--TAAACAAG 19303923 Query 13664 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 | |||||||||||||| || ||||||| || | ||||| || ||||| | || | Sbjct 19303924 CGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTAAGACCGG 19303983 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 |||| || || |||||||| | ||||||||| ||| ||| ||| || || ||||||| Sbjct 19303984 GCATTAACCCGCGTTTTTTAAGCCAAAATATCGCACAGAAGCTTCCAGAGAAAAATATTC 19304043 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCC 13843 | ||||| |||||| || | || |||||| | || ||| || || |||| Sbjct 19304044 CTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCGT---CGATCC 19304100 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 || | |||||||||| ||| ||| ||| | || || ||||| || || | ||||| Sbjct 19304101 ATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGCGTGGAATA 19304160 Query 13904 AATGTTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTC 13961 | | | || || ||| ||| || ||||| || | ||| | ||||||||| || Sbjct 19304161 ATCGGTTTTTATCAGCGGAGTCTTTG--ATATATGTTTCGAGAAGGAGGCTATACATCTC 19304218 Query 13962 AGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTG 14021 |||||| || ||||| || || || || || || || ||| | || || | ||| Sbjct 19304219 AGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGCGACTTG 19304278 Query 14022 TACCTCCGAGTAA--AATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCA 14079 | | |||| | || ||| | || | ||||||| ||| || || || || || Sbjct 19304279 AA--TTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGCGGCG 19304336 Query 14080 AAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCG 14139 || || || | |||| ||| || |||| | || || | | |||| | ||||| | Sbjct 19304337 AAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTGAGAGAATCCCAAT-G 19304395 Query 14140 GCTAA-ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14198 || || ||| | ||||||||| ||||| || | ||||| || ||| | ||||| || Sbjct 19304396 GCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCTTTCTT 19304455 Query 14199 ATACATTACCCATAT 14213 |||||| |||| || Sbjct 19304456 GTACATTTCCCAGAT 19304470 >seq11 Length=35963958 Score = 158 bits (174), Expect = 1e-33 Identities = 556/857 (65%), Gaps = 25/857 (3%) Strand=Plus/Minus Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||| ||||| |||| ||| || || ||||| || ||||| || |||| || || || Sbjct 2851025 TTTCTGATAATCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCTTGAAGCGAAATTAG 2850966 Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13486 |||||| |||| || || || | |||| | |||| ||| |||| || || | | Sbjct 2850965 TTCCATCCAATCAAACGGGTTC-TGCACATCATACACCTTACCACACCCAAGCGCACCCA 2850907 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 |||| ||||| |||| |||||||||||||||| ||| ||| | | |||||| || | | Sbjct 2850906 ATAACCTATCCGCAACAAACTCAATATATTGACTCATCAAAACCCCATTCATCCCAACCA 2850847 Query 13547 GTTTTACA-GGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATA 13605 ||| |||| | | | | ||| || | ||||| |||||| || | | Sbjct 2850846 -ACGCACATGGAAGTGCGTCACAAACAAACTCCCTCTCTATCTCCACAGCATCACGCACA 2850788 Query 13606 ATAATCTTAATAATGTCATTAGAAGGAGGATATT-----TTAGATGTTTAAAAATTAAAC 13660 || ||| | | || | ||| || |||| ||||| | || || || | Sbjct 2850787 ATCCCCTTCACACGCTCCTCTGAA--AGCTTATTCTTCATTAGA-GAGTACAA--CAAGC 2850733 Query 13661 ACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATC 13720 | || |||||||||||||| || ||||||| || | |||||||| || || | || Sbjct 2850732 AAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGAAGGTAAGTC 2850673 Query 13721 CTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATA 13780 | ||||| | |||| || || | ||| ||||| ||| ||| ||| || ||||| | Sbjct 2850672 CAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAGCACAGAAGCTTCCAGAGAAGAAAA 2850613 Query 13781 TTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT- 13839 |||| ||||| ||||||||| | || || || | || || || || || Sbjct 2850612 TTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAGGA-----TTCTGAACCATC 2850558 Query 13840 -ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATT 13898 ||||| | ||||| |||| ||| | || | || |||||||| | || | Sbjct 2850557 GATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAACCGCGTG 2850498 Query 13899 GAATAAATGTTCCTTCTC--TTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956 ||| ||| | | || || | | |||| || ||||| |||| ||| | || ||| Sbjct 2850497 GAACAAACGGTTTTTATCAGCCGAATCCTTG--ATATATGTTTCAAGAAGGAGACTGTAC 2850440 Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGAC 14016 || ||||| || || ||||| ||||| || || || || || ||| | || || | Sbjct 2850439 ATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCTCAGCG 2850380 Query 14017 CATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCT 14076 ||| | || | ||| ||| | || | ||||||| ||| ||||| ||| || Sbjct 2850379 ACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAGAGGCG 2850320 Query 14077 GCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAA 14136 || || || || | | || ||| | ||||| | || | | | |||| || | ||| Sbjct 2850319 GCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTGAGGTTCTCCCAG 2850260 Query 14137 TCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTT 14196 | | | |||| ||||||||| ||||| || | ||||| ||| || | ||||| Sbjct 2850259 TGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTCGGCTTTC 2850200 Query 14197 TTATACATTACCCATAT 14213 |||||||| |||| || Sbjct 2850199 TTATACATCTCCCAGAT 2850183 >seq2 Length=24697652 Score = 118 bits (130), Expect = 1e-21 Identities = 541/850 (64%), Gaps = 11/850 (1%) Strand=Plus/Plus Query 13368 TTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATT 13427 ||| || ||||||| ||| || || ||||| || ||||| || || | || || || Sbjct 21046621 TTTCTGGTATTCACCAACCCTCTTCTCAAAGAAATTAGTCTTCCCCTGAAGCGAAATCAA 21046680 Query 13428 TTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATCACAACCTAGTTCTAATA 13486 |||||| |||| || || ||| | |||| | |||| || |||| || || | | Sbjct 21046681 TTCCATCCAATCAAAAGGGTTT-TGCACATCATACACCTTCCCACACCCAAGCGCACCCA 21046739 Query 13487 ATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTA 13546 |||| |||||||| | ||||||||||||||| ||| ||| | | |||||| || | | Sbjct 21046740 ATAACCTATCAGCTACGAACTCAATATATTGACTCATCAAACCCCCATTCATCCCCACCA 21046799 Query 13547 GTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAA 13606 |||| | | | ||| || | ||||| || || || | || Sbjct 21046800 ACGCGCATGGAAGCGCGTCACACACAAACTCCCTCTCTATTTCAACCGCATCACGCACAA 21046859 Query 13607 TAATCTTAATAATGTCAT-TAGAAGGAGGATATT--TTAGATGTTTAAAAATTAAACACG 13663 | ||| | || | | |||| |||| ||||| | || || || |||| Sbjct 21046860 TCCCCTTCACGCGCTCTTCTGGAAGCTTCTTATTCATTAGA-GAGTACAAC--AAGCACG 21046916 Query 13664 CAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTG 13723 | |||||||| || | |||||||||| || | |||||||| || || | || | Sbjct 21046917 CGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGAAGGTAAGACCAG 21046976 Query 13724 GCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTC 13783 |||| | |||||||| || ||||||||||| ||| ||| ||| || ||||| || | Sbjct 21046977 GCATAAGGCCTCGTTTCTTCAACCAAAATATCGCACAGAAGCTTCCAGAGAAGAAAATAC 21047036 Query 13784 CCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCC 13843 | ||||| ||||||||| | || ||||| | || ||| || || |||| Sbjct 21047037 CTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGATTCTGAACCGT---CGATCC 21047093 Query 13844 ATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATA 13903 | ||||| |||| |||||| || || || || || ||||| | ||||| Sbjct 21047094 AACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCTATTGCGTGGAATA 21047153 Query 13904 AATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 13963 | | | || || | | | || || || |||| ||| | |||||||| |||| Sbjct 21047154 ATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAGACTATACATCTCAG 21047213 Query 13964 AGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTA 14023 | || || || || || || ||||| || || || || | || || | ||||| Sbjct 21047214 AATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGCCTCAGCGACTTGTA 21047273 Query 14024 CCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAA 14083 ||| | || ||| | || | ||||||| || || || || ||| || || | Sbjct 21047274 TCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTCGGAAGCGGCGAAGA 21047333 Query 14084 ATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTA 14143 | || | |||| ||| || |||| | || | | | |||| | ||| | | | Sbjct 21047334 AAGCGAGGATGTGTTTGATGAAGTGGCGTTCGCCGTCGGTGAGGGAGTCCCAGTGGCGGA 21047393 Query 14144 AATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACA 14203 ||| | ||| ||||| ||||| || | ||||| || ||| | |||||||| |||| Sbjct 21047394 GATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCTGCTTTTTTGTACA 21047453 Query 14204 TTACCCATAT 14213 || |||| || Sbjct 21047454 TTTCCCAGAT 21047463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478507601427720