Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 seq19 84.2 2e-11 >seq6 Length=33111450 Score = 86.0 bits (94), Expect = 5e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||||||||| | || || |||| || | ||| || ||||| || Sbjct 5099836 TCCTTCTGGATATTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAG 5099777 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 |||| |||||| || || | || | ||||| || || |||| | ||||| || Sbjct 5099776 ATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 5099717 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 | | ||||| | ||| || || | ||||| ||||| || ||||| ||||||||| Sbjct 5099716 TCGATGGTGTCAGAGGACTCAACCTCGAGGGTTATGGTTTTACCCGTTAGGGTTTTCACA 5099657 Query 43099 AAAATTTGCATTTTC 43113 || || ||||| ||| Sbjct 5099656 AAGATCTGCATCTTC 5099642 >seq19 Length=18159812 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977 |||||| || | ||||||||| | || |||||| | || || | ||| || || ||||| Sbjct 4941765 CTCCTTCTGAATATTGTAATCTGCCAGGGTACGTCCATCTTCAAGTTGCTTTCCAGCAAA 4941706 Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037 |||||| | || || || | || | |||||| || || |||| | || || | Sbjct 4941705 AATCAACCTTTGCTGGTCTGGAGGGATACCTTCCTTATCCTGGATCTTAGCCTTCACATT 4941646 Query 43038 GCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096 | ||| ||||| | ||| ||| || || | || || || || ||||| || || |||| Sbjct 4941645 GTCAATCGTGTC-CGAGCTCTCAACCTCCAAAGTGATTGTCTTCCCGGTAAGGGTCTTCA 4941587 Query 43097 CAAAAATTTGCAT 43109 ||||||| ||||| Sbjct 4941586 CAAAAATCTGCAT 4941574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381306513483234