Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq6 86.0 5e-12
seq19 84.2 2e-11
>seq6
Length=33111450
Score = 86.0 bits (94), Expect = 5e-12
Identities = 136/195 (70%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978
||||| || | ||||||||||| | || || |||| || | ||| || ||||| ||
Sbjct 5099836 TCCTTCTGGATATTGTAATCGGCGAGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAG 5099777
Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038
|||| |||||| || || | || | ||||| || || |||| | ||||| ||
Sbjct 5099776 ATCAGTCGCTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTG 5099717
Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098
| | ||||| | ||| || || | ||||| ||||| || ||||| |||||||||
Sbjct 5099716 TCGATGGTGTCAGAGGACTCAACCTCGAGGGTTATGGTTTTACCCGTTAGGGTTTTCACA 5099657
Query 43099 AAAATTTGCATTTTC 43113
|| || ||||| |||
Sbjct 5099656 AAGATCTGCATCTTC 5099642
>seq19
Length=18159812
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42918 CTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAA 42977
|||||| || | ||||||||| | || |||||| | || || | ||| || || |||||
Sbjct 4941765 CTCCTTCTGAATATTGTAATCTGCCAGGGTACGTCCATCTTCAAGTTGCTTTCCAGCAAA 4941706
Query 42978 AATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCT 43037
|||||| | || || || | || | |||||| || || |||| | || || |
Sbjct 4941705 AATCAACCTTTGCTGGTCTGGAGGGATACCTTCCTTATCCTGGATCTTAGCCTTCACATT 4941646
Query 43038 GCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCA 43096
| ||| ||||| | ||| ||| || || | || || || || ||||| || || ||||
Sbjct 4941645 GTCAATCGTGTC-CGAGCTCTCAACCTCCAAAGTGATTGTCTTCCCGGTAAGGGTCTTCA 4941587
Query 43097 CAAAAATTTGCAT 43109
||||||| |||||
Sbjct 4941586 CAAAAATCTGCAT 4941574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381306513483234
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |