Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq11 190 3e-43 seq9 179 5e-40 seq2 168 9e-37 seq2896 109 7e-19 seq1 102 1e-16 >seq11 Length=35963958 Score = 190 bits (210), Expect = 3e-43 Identities = 415/615 (67%), Gaps = 10/615 (2%) Strand=Plus/Minus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || |||||||| || || || || ||||||| || || ||||| || | Sbjct 2850741 ACAACAAGCAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTTGAGA 2850682 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGAT-CCA 42175 | || ||||| ||||| || || | ||| |||||||| ||||||| | || | | | ||| Sbjct 2850681 AGGTAAGTCCAGGCATAAGACCTCTCTTCTTAAGCCAGAATATAG-CACAGAAGCTTCCA 2850623 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 || ||||| |||||||| || ||||| |||| ||| | ||| | | | ||| Sbjct 2850622 GAGAAGAAAATTCCTTCAACACAAGCAAACGCAACAAGGCGCTCAGCGAAG--GATTCTG 2850565 Query 42236 T--CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 42293 ||| ||||| | ||||| || || ||| | |||||||| || ||||| | Sbjct 2850564 AACCATCGATCCAACGTAACGCCCACTCAGCTTTCCTCGCAACACAAGGGATTGTTTCAA 2850505 Query 42294 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGAC 42353 || | || | | |||||| ||| ||| || | |||||| || | | |||| Sbjct 2850504 CCGCGTGGAACAAACGGTTTTTATCAGCCGAATCCTTGATATATGTTTCAAGAAGGAGAC 2850445 Query 42354 TATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCT 42413 | ||||| || ||||| || |||||||| || || || |||||||||||| | |||| Sbjct 2850444 TGTACATCTCAGAATGGATATTTTCAATAGCAATTTGGAATCCGTAGAAAGCACGCGCCT 2850385 Query 42414 CGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCAC 42473 | | || || | ||| || ||| | | | || | ||||| || || |||||| Sbjct 2850384 CAGCGACTTGGATTTCAGTCATAAACCTTCCGGCAAGGTTTTCAAGAACGATACCGTCAG 2850325 Query 42474 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAATTT 42531 ||| || || || || | || ||||| | ||| | |||| | ||||| | || Sbjct 2850324 AGGCGGCGAAGAAAGCGAGGACGTGTTTGACAAAGTGGCGTTCGCCGTCGGTG--AGGTT 2850267 Query 42532 ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTC 42591 | ||| | || || | ||| | ||| ||||| || | ||||| || |||||||| Sbjct 2850266 CTCCCAGTGGCGGACGTCCTGAGAAAGATCAACTTCCTCGGCGGTCCAGAAAGATGCTTC 2850207 Query 42592 TGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATT 42651 || || |||||||| | |||||| | | | ||||||||||| || || ||| | | Sbjct 2850206 GGCTTTCTTATACATCTCCCAGATCTGAGGGTATTGAATTGGAAACATGCAAAAACGGTC 2850147 Query 42652 TGGATTTGGTGCAAG 42666 ||||||||| || || Sbjct 2850146 TGGATTTGGAGCCAG 2850132 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| || ||||| | || | ||| || | |||| |||| | || |||||||| |||||| Sbjct 31406825 TCCACCTTGATCAACATAGCGAGCAGTATCATTAAAAACACGCAGCATTGGAACAATACC 31406766 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||||||| ||||| || || ||| || || || |||| || || ||| || || Sbjct 31406765 ATTGGATGTCCCATTAGTTCCCCGGATGTAACTGCCTGTGGCTCGGATGTTGTGAACAGA 31406706 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || ||| ||| || || || || |||||||| || Sbjct 31406705 AACACCAATTCCTCCAGCTGATTTGCTGATCGCAGCACACTCCTTCAAAGTATCATATAT 31406646 Query 72357 GCCCTCTATACTATCATCCATCAT 72380 ||||||||||||||||| |||| Sbjct 31406645 TCCCTCTATACTATCATCTTTCAT 31406622 Score = 91.5 bits (100), Expect = 2e-13 Identities = 144/201 (72%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 || || ||||| || | |||||||| || || || |||||| | | |||| |||| | Sbjct 31406441 GTCCCGGCATTGAACAGAGTAGGAGATGCATGAGTGAACCATCTCTGTGACATCAGATGG 31406382 Query 72478 TACGTCTCAATAGCTGATTCTAT---ATCCCATTGATGTATTCCTACCGCGACACGCATT 72534 || || | | ||| || ||||| |||| ||| || ||||| || | || | ||| Sbjct 31406381 TATGTTTTGACAGCAGAATCTATGTTATCC--TTG-TGAATTCCAACAGAAACCCTCATC 31406325 Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATT-TATTTTCAACAAGTAGGATTTTTC 72593 ||||| ||||||||||||||||| | ||||| || | ||||| | |||||| | || Sbjct 31406324 AACATGTGCTGAGGTCTTTCAAC-AACTTGTCCTTCAACCTTCAAGAGGTAGGACCTCTC 31406266 Query 72594 CAAAGTTTTAAAACCAAAATA 72614 | ||||| |||||||| || Sbjct 31406265 AAGGGTTTTGAAACCAAAGTA 31406245 >seq9 Length=21753712 Score = 179 bits (198), Expect = 5e-40 Identities = 410/611 (67%), Gaps = 12/611 (2%) Strand=Plus/Plus Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121 ||||| |||||||| || || || || ||||||| || || ||||| || || || Sbjct 19303917 AAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTA 19303976 Query 42122 AGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCAGAAAA 42180 || |||||||||| || || ||||||||||||||||| | | || || |||||| || Sbjct 19303977 AGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCG-CACAGAAGCTTCCAGAGAA 19304035 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC---ATAACCGGCACTGTC 42237 || |||||||| || ||||| |||| || | ||| | | | | || ||| Sbjct 19304036 AAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAAGGATTCTGAACCGTC 19304095 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 ||||| | ||||| || || |||||| | |||||||| || ||||| || || Sbjct 19304096 ---GATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGC 19304152 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 | || | |||||| ||| ||||| | |||||| |||| | || ||||| Sbjct 19304153 GTGGAATAATCGGTTTTTATCAGCGGAGTCTTTGATATATGTTTCGAGAAGGAGGCTATA 19304212 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 ||| || || || || ||||||||||| || || || ||||||||| | ||||| | Sbjct 19304213 CATCTCAGAGTGGATATTTTCAATGGCGATTTGGAAGCCGTAGAAAGCACGCGCCTCAGC 19304272 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 || || | || || || | | | || | ||||| || |||||||| ||| Sbjct 19304273 GACTTGAATTTGAGTCATGAACCTTCCGGCGAGGTTTTCAAGAACGATTCCGTCGGAGGC 19304332 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTGTTAATTTATTC 42535 || || || || | | ||||| || || | ||| || ||||| | || | Sbjct 19304333 GGCGAAGAAGGCGAGGATGTGTTTGATGAAGTGGCGTTCATCGTCGGTG--AGAGAATCC 19304390 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 |||| | ||||| ||| | ||| |||||||| | ||||| ||||| ||||| || Sbjct 19304391 CAATGGCGAAGATCTTGAGAAAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTTCGGCT 19304450 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGA 42655 || || ||||| | |||||| | | | ||||| ||||| || || || | || ||| Sbjct 19304451 TTCTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGAAACATGCAGAAACGATCTGGG 19304510 Query 42656 TTTGGTGCAAG 42666 ||||| || || Sbjct 19304511 TTTGGAGCCAG 19304521 >seq2 Length=24697652 Score = 168 bits (186), Expect = 9e-37 Identities = 418/625 (67%), Gaps = 12/625 (2%) Strand=Plus/Plus Query 42057 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAA 42116 ||| ||| || |||||||| ||||| | ||||||||||| ||||| ||||| || | Sbjct 21046905 ACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 21046964 Query 42117 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCA-AATGATCCA 42175 | || || || ||||| ||||| || || || | ||||||||| | | || || |||| Sbjct 21046965 AGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCG-CACAGAAGCTTCCA 21047023 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC---ATAACCGGCA 42232 || ||||| || ||||| || ||||| |||| || | || | | | | | Sbjct 21047024 GAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCGAAGGATTCTGAA 21047083 Query 42233 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 | ||| ||||| | ||||| || || || || || ||||| ||||| ||| Sbjct 21047084 CCGTC---GATCCAACGAAGCGCCCACTCAGCTTTTTTAGCAACGCAAGGTATCGTCTCT 21047140 Query 42293 ATGGCATTAAAGAGATAG-tttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 || || | || | || | ||||| ||| |||||| | ||| || || | | || Sbjct 21047141 ATTGCGTGGAATA-ATCGATTTTTATCAGCGGAATCTTTGATATACGTTTCAAGAAGGAG 21047199 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 ||||||||| || ||||| || || || || || ||||| || |||||||| | || Sbjct 21047200 ACTATACATCTCAGAATGGATATTCTCGATTGCGATCTGGAAGCCGTAGAATGCACGCGC 21047259 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 ||| | || |||| ||||| || | | | || | ||||| || |||||||| Sbjct 21047260 CTCAGCGACTTGTATCTCTGTCATGAACCTTCCGGCGAGGTTTTCAAGGACGATTCCGTC 21047319 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTT 42531 || || || || || | | ||||| || || | |||| ||| | | | Sbjct 21047320 GGAAGCGGCGAAGAAAGCGAGGATGTGTTTGATGAAGTGGCGTTCG-CCGTCGGTGAGGG 21047378 Query 42532 A-TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTT 42590 | | ||| | || ||||| ||| | ||| |||||||| | ||||| ||||| |||| Sbjct 21047379 AGTCCCAGTGGCGGAGATCTTGAGAGAGATCGACTTCTTCGGCGGTCCAGAATGAAGCTT 21047438 Query 42591 CTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTAT 42650 |||| ||||| ||||| | |||||| | | | ||||| |||||||| || || | || Sbjct 21047439 CTGCTTTTTTGTACATTTCCCAGATCTGAGGGTATTGGATTGGGAACATGCAGAAACGAT 21047498 Query 42651 TTGGATTTGGTGCAAGGATCGGTTC 42675 || ||||| ||||| | ||||| Sbjct 21047499 CAGGGTTTGGAGCAAGAAGAGGTTC 21047523 >seq2896 Length=25968 Score = 109 bits (120), Expect = 7e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| || ||||| | || | || || | ||| | || | || |||||||||||| || Sbjct 4779 TCCACCTTGATCAACATAGCGCGCAGTATCATTGAACACACGCAGCATTGGAATAATGCC 4720 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||||||| ||||| ||||| || || || || |||||||||||||| || || Sbjct 4719 ATTGGATGTCCCATTTGTCCCACGAATGTAACTGCCTGTGGCACGAATATTGTGAACAGA 4660 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || |||| ||| | || || ||| || || ||||| || Sbjct 4659 GACACCAATTCCTCCAGCTGATTTACTGATGACAGCACACTCTTTCAAAGTTTCATATAT 4600 Query 72357 GCCCTCTATACTATCATCCATCATG 72381 ||||||||||||||||| ||||| Sbjct 4599 ACCCTCTATACTATCATCTTTCATG 4575 >seq1 Length=36457581 Score = 102 bits (112), Expect = 1e-16 Identities = 145/199 (73%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 ||||| ||||| |||| |||||||| || || || |||||| | | ||||| ||| | | Sbjct 33689444 GTTCCGGCATTGAATAGAGTAGGAGATGCATGAGTGAACCATCTCTGAGACATTAGGTGG 33689503 Query 72478 TACGTCTCAATAGCTGATTCTATATCC-CATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || | | ||| || || || || | ||| || ||||| || | || | ||| || Sbjct 33689504 TAAGTTTTGACAGCAGAATCAATGTCATCCTTG-TGAATTCCAACAGAAACCCTCATCAA 33689562 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATT-TATTTTCAACAAGTAGGATTTTTCCA 72595 ||| ||||||||||||||||| | ||| | || | ||||||| |||||| | || | Sbjct 33689563 CATGTGCTGAGGTCTTTCAAC-AACTTTTCCTTCAACCTTCAACAGGTAGGACCTCTCAA 33689621 Query 72596 AAGTTTTAAAACCAAAATA 72614 ||||| |||||||| || Sbjct 33689622 GGGTTTTGAAACCAAAGTA 33689640 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236 ||| |||||||| | || | || || | ||| | || | || |||||||| |||||| Sbjct 33689079 TCCACCCTGATCAACATAGCGGGCAGTATCATTGAACACACGCAGCATTGGAACAATACC 33689138 Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGA 72296 |||||||| ||||| || || || || || || |||||||||| ||| || || Sbjct 33689139 ATTGGATGTCCCATTAGTTCCACGAATGTAACTCCCTGTGGCACGAATGTTGTGAACAGA 33689198 Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 | ||| ||||| || || ||| |||| || || || || |||||||| || Sbjct 33689199 AACACCAATTCCTCCAGCTGATTTGCTGATTGCAGCACACTCCTTCAAAGTATCATATAT 33689258 Query 72357 GCCCTCTATACTATCATCCATCAT 72380 ||||||||||||||||| |||| Sbjct 33689259 TCCCTCTATACTATCATCTTTCAT 33689282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671025332845480