Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq19 86.0 6e-12
seq5 86.0 6e-12
seq12525 84.2 2e-11
>seq19
Length=18159812
Score = 86.0 bits (94), Expect = 6e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 142975 AACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTT 143033
||| | ||||| |||||||| ||||| || |||||||| ||| | || || ||||
Sbjct 4557357 AACAAGATGAAGAGTAGATTCCTTTTGAATATTGTAATCAGCT-AGGGTTCTTCCATCTT 4557299
Query 143034 CGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGG 143093
| |||||||||||||| | |||| |||||| ||||| || || | |||||||| ||
Sbjct 4557298 CAAGTTGTTTACCAGCGAAAATCAAACGTTGTTGATCTGGTGGAACTCCTTCTTTATCTT 4557239
Query 143094 TAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCT 143153
|| || ||| | | || | ||||| || ||| ||||| | || | || |
Sbjct 4557238 GGATCTTGGCTTTCACATTGTCGATTGTGTCACTGCTTTCAACTTCTAGGGTTATTGTTT 4557179
Query 143154 TGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
| || || | ||||| ||||| || |||||
Sbjct 4557178 TACCCGTTAGGGTTTTCACGAAGATCTGCAT 4557148
>seq5
Length=26376911
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATC-GCT 143016
|| || || | ||| | |||||||| | || ||||| || || |||||||| || |||
Sbjct 2894152 CCACCACGAAGACGAAGCACTAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCT 2894211
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
| || | || || || || || |||||| |||| || | || || ||||| ||
Sbjct 2894212 AAG-GTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGTTGGTCGGGTGG 2894270
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
||||| |||||||| |||||| || | | || | ||||||| || ||
Sbjct 2894271 GATGCCCTCTTTGTCTTGAATTTTGGCCTTCACATTATCTATGGTGTCCGAACTCTCAAC 2894330
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||||| || | ||||| |||||||| || || || ||||||||||||
Sbjct 2894331 TTCAAGTGTGATGGTCTTTCCGGTCAAGGTCTTGACAAATATTTGCATA 2894379
>seq12525
Length=279716
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 142969 ACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGA 143028
||| | ||| | ||||| || || || || || |||||||| || | ||||
Sbjct 230464 ACGAAGAACCAGATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCTGCAAGGGTGCGGCC 230405
Query 143029 GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTT 143088
|||||||| |||||||||||| ||||||| | ||||| || ||||| |||||||| ||
Sbjct 230404 ATCTTCGAGCTGTTTACCAGCAAAGATCAGCCTCTGCTGGTCTGGAGGAATGCCTTCCTT 230345
Query 143089 GTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCAC 143148
||| || || || | | || | ||||| | | |||||| |||| ||| |
Sbjct 230344 GTCCTGGATCTTCGCCTTGACATTATCAATGGTGTCAGAGCTTTCTACCTCAAGAGTGAT 230285
Query 143149 CGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||| || || | || || || || || |||||
Sbjct 230284 TGTCTTTCCAGTAAGGGTCTTCACAAAAATCTGCAT 230249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506928378669360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |