Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 1e-12 >seq4 Length=27333975 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||| | | ||| ||||| | ||| | || || ||||| || ||||| ||||| || Sbjct 24477616 CCTCCCCTAAGCCTCAACACAAGGTGAAGTGTTGATTCCTTCTGGATATTATAATCAGCT 24477557 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | ||| | | || || || ||||| || || |||| | |||||||||||| || Sbjct 24477556 AGGGTTCTTCCATCTTCAAGTTGTTTTCCAGCGAAAATCAATCTCTGCTGATCTGGTGGA 24477497 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || || || || ||| ||| ||||| | | ||| || ||| | |||| | Sbjct 24477496 ATTCCTTCCTTATCTTGAATCTTCGCCTTTACGTTGTCGATGGTGTCGGAACTCTCCACT 24477437 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATT 19042 || | ||| |||||||| || || | ||||| || || ||||||||| Sbjct 24477436 TCTAGGGTTATGGTTTTGCCGGTGAGGGTTTTTACGAAGATTTGCATT 24477389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414504220978762