Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq5 82.4 6e-11
seq4 82.4 6e-11
>seq5
Length=26376911
Score = 82.4 bits (90), Expect = 6e-11
Identities = 142/204 (70%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065
|| || || || ||||| || ||||| || || | | || | ||| || | |||
Sbjct 2893948 TGGAGAGTTGACTCTTTCTGGATGTTATAGTCAGCTAAGGTACGACCATCCTCGAGTTGC 2894007
Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125
||||| ||| |||||||||||||||| || || | ||| |||||||| ||||||
Sbjct 2894008 TTGCCAGCAAAAATAAGCCTCTGTTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATTTTG 2894067
Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGT-TCCGTTTCCACGGTAATGGTTTTGCCGGT 20184
||||| | | ||| | || || | ||| ||| | || ||||| || |||||
Sbjct 2894068 GCCTTCACATTGTCAATTGTGTC-AGAGCTCTCCACTTCAAGTGTGATGGTCTTTCCGGT 2894126
Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208
||| || |||||||| ||||||||
Sbjct 2894127 CAAGGTCTTGACAAAGATTTGCAT 2894150
>seq4
Length=27333975
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065
|| || ||||| || || || || || ||||| ||| ||| | |||||| |||||
Sbjct 24477820 TGAAGAGTAGACTCCTTCTGAATATTATAATCAGCCAAAGTCCTTCCATCTTCTAATTGC 24477761
Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125
|| || ||| |||| | |||||| ||||| || | ||||| || || ||| ||
Sbjct 24477760 TTCCCTGCAAAAATCAACCTCTGCTGATCCGGTGGAATACCTTCCTTATCCTGAATCTTA 24477701
Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185
|||||| | ||| | ||| | |||| |||| ||||||||||| || |||
Sbjct 24477700 GCTTTCACATTATCAATTGTATCAGAACTTTCCACCTCCAAAGTAATGGTTTTCCCAGTC 24477641
Query 20186 AACGTTTTGACAAAAATTTGCAT 20208
|| || || |||||||| |||||
Sbjct 24477640 AAAGTCTTCACAAAAATCTGCAT 24477618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419517791492013
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |