Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq12 161 2e-35 seq1 156 7e-34 seq7 140 5e-29 seq4 127 3e-25 seq5 125 1e-24 seq19 116 6e-22 seq20 109 9e-20 seq11 104 4e-18 seq8 98.7 2e-16 seq9 96.9 5e-16 >seq12 Length=19065701 Score = 161 bits (178), Expect = 2e-35 Identities = 176/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||||||||||||||| || || |||||| |||||||||| ||||| || Sbjct 17071047 GATAACATCCAAGGAATCACCAAGCCTGCAATTCGTCGTTTGGCTCGTCGAGGTGGTGTG 17071106 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 |||||| || ||| || |||| ||||||| |||| || | |||||||||||| || Sbjct 17071107 AAGCGTATCAGTGGTTTAATCTACGAAGAGACACGTGGCGTCCTTAAGATCTTCCTCGAG 17071166 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||||| | || || ||||| ||| || ||||| || || | Sbjct 17071167 AACGTGATTCGTGATGCTGTTACTTACACTGAGCATGCTCGCCGCAAGACGGTGACTGCA 17071226 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 |||||| | || ||||| | || | || || || | |||||||||||||| Sbjct 17071227 ATGGATGTTGTTTATGCTCTTAAGAGACAGGGTCGCACTCTTTATGGTTTTGGA 17071280 >seq1 Length=36457581 Score = 156 bits (172), Expect = 7e-34 Identities = 179/241 (74%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||| | || ||||||||||||||||| ||||| || || || ||| ||||||||||||| Sbjct 22115839 TCTTAGGGACAACATCCAAGGAATCACGAAGCCTGCGATTCGGCGTTTGGCTCGTCGTGG 22115780 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||| || || ||| || ||| | |||||||||||| ||||| |||| |||||||||| Sbjct 22115779 TGGTGTTAAACGTATCAGTGGCCTCATCTATGAAGAGACTCGTGGTGTTCTGAAGATCTT 22115720 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 || ||| || || | ||||||| | || || ||||| ||| ||||| || || Sbjct 22115719 TCTTGAGAATGTGATTCGTGATGCTGTTACTTACACTGAGCATGCTCGTCGTAAAACGGT 22115660 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | ||||| | |||||||| | || | || || || | ||||||||||||| Sbjct 22115659 GACTGCAATGGACGTTGTCTATGCCCTCAAGAGGCAGGGTCGCACTCTTTATGGTTTTGG 22115600 Query 16693 A 16693 | Sbjct 22115599 A 22115599 >seq7 Length=19782170 Score = 140 bits (154), Expect = 5e-29 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||||||||| ||||| |||||||| || |||||| | ||||||||||||||| Sbjct 1699175 CGTGATAACATCCAAGGTATCACTAAGCCAGCGATTCGTCGTTTAGCTCGTCGTGGTGGA 1699116 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| || ||| | |||| ||||||| |||| || | ||||||||| | Sbjct 1699115 GTGAAGCGTATCAGTGGCCTTATCTACGAAGAGACACGTGGCGTCCTCAAGATCTTCTTG 1699056 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| ||| || | || || |||||||||| | | ||||| || || Sbjct 1699055 GAAAACGTCATCCGTGACGCCGTTACTTACACTGAGCACGCTAGAAGGAAGACCGTTACG 1698996 Query 16637 TCCATGGATATCGTCTATGC 16656 | |||||| | |||||||| Sbjct 1698995 GCGATGGATGTTGTCTATGC 1698976 Score = 140 bits (154), Expect = 5e-29 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || |||||||||||||| ||||| |||||||| || |||||| | ||||||||||||||| Sbjct 1712577 CGTGATAACATCCAAGGTATCACTAAGCCAGCGATTCGTCGTTTAGCTCGTCGTGGTGGA 1712518 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 || |||||| || ||| | |||| ||||||| |||| || | ||||||||| | Sbjct 1712517 GTGAAGCGTATCAGTGGCCTTATCTACGAAGAGACACGTGGCGTCCTCAAGATCTTCTTG 1712458 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | ||| |||| ||| || | || || |||||||||| | | ||||| || || Sbjct 1712457 GAAAACGTCATCCGTGACGCCGTTACTTACACTGAGCACGCTAGAAGGAAGACCGTTACG 1712398 Query 16637 TCCATGGATATCGTCTATGC 16656 | |||||| | |||||||| Sbjct 1712397 GCGATGGATGTTGTCTATGC 1712378 >seq4 Length=27333975 Score = 127 bits (140), Expect = 3e-25 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || ||||| ||||||||||| || || || || |||||| ||||| | | || Sbjct 17377301 TCTTCGTGACAACATTCAAGGAATCACAAAACCTGCGATTCGTCGTTTGGCTAGGAGAGG 17377242 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | | ||| ||| | |||||||| | ||||| || |||||||| || Sbjct 17377241 AGGTGTGAAGAGAATTAGTGGTTTGATTTATGAAGAAACTCGTGGGGTGTTGAAGATTTT 17377182 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 || ||| || || | ||||||| | ||||| ||||| |||| | |||||||| Sbjct 17377181 TCTAGAGAATGTGATTCGTGATGCTGTTACTTATACTGAGCATGCTAGGAGGAAGACTGT 17377122 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | |||||| | || ||||| ||||| | || || | | ||||||| ||||| Sbjct 17377121 TACTGCTATGGATGTTGTTTATGCTTTGAAGAGACAGGGAAGGACCCTTTATGGGTTTGG 17377062 Query 16693 AAGTTAAT 16700 |||||| Sbjct 17377061 TGGTTAAT 17377054 >seq5 Length=26376911 Score = 125 bits (138), Expect = 1e-24 Identities = 176/247 (71%), Gaps = 0/247 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| |||||||| |||||||| ||||| || || || |||||| | |||||| | ||| Sbjct 26033201 CTTCGTGATAACATTCAAGGAATTACCAAACCTGCAATTCGTCGTTTAGCTCGTAGAGGT 26033142 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || ||| | || || || |||||||||| | ||| | |||||||||||||| Sbjct 26033141 GGTGTTAAGAGAATCAGCGGTTTAATCTATGAAGAAACTCGCGGCGTTTTGAAGATCTTT 26033082 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 || | | |||||| | ||||||| | || || ||||| |||| | ||||| || Sbjct 26033081 CTAGAAAACGTTATTCGTGATGCTGTTACTTACACTGAGCATGCTAGGAGGAAGACGGTT 26033022 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| | || || || | || | ||||| | | | ||||||||||| Sbjct 26033021 ACTGCTATGGATGTTGTTTACGCTCTCAAGAGACAAGGAAGGACCCTCTATGGTTTTGGT 26032962 Query 16694 AGTTAAT 16700 ||| || Sbjct 26032961 GGTTGAT 26032955 >seq19 Length=18159812 Score = 116 bits (128), Expect = 6e-22 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || ||||| |||||||| ||||| || || || |||||| | ||||| | || Sbjct 6933813 TCTTCGTGACAACATTCAAGGAATTACCAAACCTGCCATTCGTCGTTTAGCTCGAAGAGG 6933754 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | | ||||| | ||||||| |||| |||| |||||||||||||| Sbjct 6933753 CGGTGTGAAGAGAATTTCTGGCCTCATCTATGAGGAGACACGTGGCGTTTTGAAGATCTT 6933694 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| ||| ||| || | |||||| | || || ||||| |||| | | || || || Sbjct 6933693 TCTCGAGAACGTGATTCGTGATGCGGTTACTTACACTGAGCATGCTAGAAGGAAAACGGT 6933634 Query 16633 CACCTCCATGGATATCGTCTATGC 16656 || | |||||| | || ||||| Sbjct 6933633 TACTGCTATGGATGTTGTGTATGC 6933610 >seq20 Length=21988590 Score = 109 bits (120), Expect = 9e-20 Identities = 176/252 (70%), Gaps = 1/252 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 |||||| || ||||| ||||||||||| || || || || |||||| ||||| | | || Sbjct 10942140 TCTTCGTGACAACATTCAAGGAATCACAAAACCTGCGATTCGTCGTTTGGCTAGAAGAGG 10942199 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || |||||| | | ||| | | |||||||| | ||||| ||| |||||||| || Sbjct 10942200 AGGTGTCAAGAGAATTAGTGGTCTCATTTATGAAGAAACTCGTGGTGTGTTGAAGATTTT 10942259 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 || ||| ||||| | |||||| | || || || || |||| | ||||| || Sbjct 10942260 TCTAGAGAATGTTATTCGTGATGCAGTGACTTACACAGAACATGCTAGGAGGAAGACGGT 10942319 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | |||||| | || ||||| | || | || || | | ||||||||||||| Sbjct 10942320 TACTGCTATGGATGTGGTTTATGCTCTTAAGAGACAGGGAAGGACCCTTTATGGTTTTGG 10942379 Query 16693 AAGTTAA-TCTT 16703 ||||| |||| Sbjct 10942380 TGGTTAAGTCTT 10942391 >seq11 Length=35963958 Score = 104 bits (114), Expect = 4e-18 Identities = 183/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||| | ||||||| |||||| |||||||||||||| || || ||||| || || Sbjct 2926533 GCAAAGAGGCATCGCAAGGTTCTTCGCGATAACATCCAAGGTATTACTAAGCCCGCGATT 2926592 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || | || ||| | | || ||||| ||| | || ||| ||| | ||||| || | Sbjct 2926593 CGAAGGCTCGCTAGAAGAGGAGGAGTTAAGAGAATCAGTGGTTTGATTTATGAGGAAACC 2926652 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 | | || ||||||||||||||| ||| ||| || | ||||| | || || ||| Sbjct 2926653 AGAGGAGTGTTGAAGATCTTCCTCGAGAACGTGATTCGCGATGCGGTGACTTACACGGAG 2926712 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | ||||| || || | |||||| | |||||||| | || | || || Sbjct 2926713 CATGCGAGGAGGAAGACGGTTACAGCTATGGATGTGGTCTATGCTCTTAAGAGGCAGGGA 2926772 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| |||||| ||||| Sbjct 2926773 AGGACTCTCTATGGATTTGGAGGTTAA 2926799 Score = 84.2 bits (92), Expect = 3e-12 Identities = 166/246 (67%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || || || || |||||||| || || || || || |||||| | ||| | | || Sbjct 21144989 CTCCGTGACAATATTCAAGGAATAACAAAACCTGCGATTCGTCGTTTAGCTAGAAGAGGA 21145048 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || || || | | ||| | | |||||||| | ||||| ||| |||||||| ||| Sbjct 21145049 GGTGTGAAAAGGATTAGTGGTCTTATATATGAAGAAACTCGTGGTGTGTTGAAGATTTTC 21145108 Query 16574 CTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTC 16633 | ||| || || | ||||||| | ||||| ||||| |||| | ||||| || Sbjct 21145109 TTGGAGAATGTGATTCGTGATGCTGTTACTTATACTGAGCATGCTAGGAGAAAGACGGTT 21145168 Query 16634 ACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGA 16693 || | |||||| | || || || | || | || || | | ||||||||||||| Sbjct 21145169 ACGGCTATGGATGTTGTTTACGCTCTCAAGAGACAGGGTAGGACCCTTTATGGTTTTGGT 21145228 Query 16694 AGTTAA 16699 ||||| Sbjct 21145229 GGTTAA 21145234 >seq8 Length=25521646 Score = 98.7 bits (108), Expect = 2e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||||||||| || || |||||||| || || | ||||| | | ||||| | Sbjct 20811094 GAGACAACATCCAAGGCATAACGAAGCCAGCGATTCGGAGATTGGCTAGGAGGGGTGGTG 20811035 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | ||| | | ||| ||| ||||||| || | | | | ||| |||||||||||| | Sbjct 20811034 TTAAGAGGATAAGTGGTTTGATCTATGAGGAAACTAGAGGTGTGTTGAAGATCTTCTTGG 20810975 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | |||||| | |||||| | || || || ||||| | | |||||||| || Sbjct 20810974 AAAACGTTATTCGTGATGCGGTTACTTACACTGAACACGCGAGGAGGAAGACTGTTACTG 20810915 Query 16638 CCATGGATATCGTCTATGC 16656 |||||||| | || ||||| Sbjct 20810914 CCATGGATGTTGTTTATGC 20810896 >seq9 Length=21753712 Score = 96.9 bits (106), Expect = 5e-16 Identities = 169/246 (69%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || || ||||| ||||| ||||| ||||| || || || | || || | | || Sbjct 19170112 TCTCCGTGACAACATTCAAGGTATCACTAAGCCCGCAATTCGAAGGCTCGCAAGAAGAGG 19170053 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 |||||| ||| | || ||| ||| ||||||| || | | | || | |||||||| Sbjct 19170052 TGGAGTGAAGAGAATCAGTGGTTTGATCTATGAGGAAACAAGAGGAGTACTCAAGATCTT 19169993 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | ||| || | ||||||| | || ||||||||||| | | ||||| || Sbjct 19169992 TCTCGAAAACGTGATTCGTGATGCTGTTACTTACACCGAGCACGCAAGGAGGAAGACGGT 19169933 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 || | |||||| | |||||||| | || | ||||| | | | ||||| ||||| Sbjct 19169932 TACAGCTATGGATGTGGTCTATGCTCTCAAGAGGCAAGGAAGAACCCTGTATGGGTTTGG 19169873 Query 16693 AAGTTA 16698 | |||| Sbjct 19169872 AGGTTA 19169867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79062790111089