Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq664 466 3e-126 seq19 174 3e-38 seq9 138 2e-27 seq1 132 8e-26 seq5 125 1e-23 seq11 118 2e-21 seq3662 104 4e-17 seq3 98.7 2e-15 >seq664 Length=18451 Score = 466 bits (516), Expect = 3e-126 Identities = 670/942 (71%), Gaps = 2/942 (0%) Strand=Plus/Minus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGT 211670 || |||||||||||| | |||||||| | ||| | | | ||||| | ||||| | Sbjct 1464 GGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTAT 1406 Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730 || ||||| || || ||||| || ||||| || || || ||||| || || |||| || Sbjct 1405 CGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATC 1346 Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790 | | || || ||||| || || || ||||| || |||| |||| || ||||| Sbjct 1345 TCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGG 1286 Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGG 211850 ||| ||||| || || || |||||||| ||| | ||||||| ||| | |||||||| || Sbjct 1285 TTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGG 1226 Query 211851 TCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACA 211910 |||||| | | | | | |||||| | | || | | |||||||| | | Sbjct 1225 TCCTTATGAACTAATTGTTCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGA 1166 Query 211911 GTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACC 211970 |||||||||| | ||| | |||||||| |||||||| ||||| |||||||| || Sbjct 1165 GTGGGAACTTAGTTTTCGTCTGGGTATGCGCCCTTGGATTGCGGTTGCATATTCAGCTCC 1106 Query 211971 TGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGA 212030 ||| |||| ||| ||||| ||| | |||| ||| ||||||| || || || || Sbjct 1105 TGTTGCAGCTGCTACTGCTGTTTTCTTGATTTATCCAATCGGTCAAGGAAGCTTTTCGGA 1046 Query 212031 CGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACA 212090 ||||||||| |||| || || || || |||||||| ||| | ||||| || || || || Sbjct 1045 TGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTTATGATTGTATTTCAGGCTGAGCA 986 Query 212091 TAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATT 212150 || || |||||||| ||||| || ||| ||| || || ||| | ||||| || | | Sbjct 985 CAATATTCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCT 926 Query 212151 ATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTT 212210 |||| ||||||||||||||| | || || ||| | ||| | |||||||| | Sbjct 925 ATTCAGTGCTATGCACGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAA 866 Query 212211 AGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGTTGC 212270 || || ||| | ||||||| || || ||||| ||||| || ||||| || || || Sbjct 865 TGAATCTGCTAACGAAGGTTACAGATTTGGTCAAGAGGAAGAAACCTATAATATTGTAGC 806 Query 212271 TGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGAAG 212330 ||| ||||| || || || || | |||||||| ||||| ||||| || | Sbjct 805 TGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGTTC 746 Query 212331 TTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTAT 212390 |||||| ||||| || || | |||||||| | || | ||||| ||| | | ||||| Sbjct 745 TTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTAT 686 Query 212391 CTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATC 212450 | | || ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct 685 CAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGTCA 626 Query 212451 AGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGT 212510 |||| || || ||| |||| |||| || ||||| |||| ||||||||||||||||| Sbjct 625 AGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAGT 566 Query 212511 TATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||| ||| | ||||| || |||||||| || ||| |||| Sbjct 565 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 524 >seq19 Length=18159812 Score = 174 bits (192), Expect = 3e-38 Identities = 209/284 (74%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 212269 GCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAACAGCAGA 212328 ||||| ||||| || || || || | |||||||| ||||| ||||| || | Sbjct 6185435 GCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTCAATAATTCTCGT 6185494 Query 212329 AGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGT 212388 |||||| ||||| || || | |||||||| | || | ||||| ||| | | ||| Sbjct 6185495 TCTTTACATTTCTTTCTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGT 6185554 Query 212389 ATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCA 212448 ||| | || ||||| ||||| ||||||| ||||| ||||||||||| || |||||| Sbjct 6185555 ATCAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCGTAGTTGATAGT 6185614 Query 212449 TCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAA 212508 |||| || || ||| |||| |||| || ||||| |||| ||||||||||||||| Sbjct 6185615 CAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGAGCTAACCTTGGTATGGAA 6185674 Query 212509 GTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||||||| ||| | ||||| || |||||||| || ||| |||| Sbjct 6185675 GTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 6185718 >seq9 Length=21753712 Score = 138 bits (152), Expect = 2e-27 Identities = 165/223 (74%), Gaps = 1/223 (0%) Strand=Plus/Minus Query 212331 TTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTT-AACCTCTATGGGTA 212389 |||||| ||||| || | |||||||| | || | ||||| |||| | | |||| Sbjct 18376611 TTTACATTTCTTTCTAGTTGTTTGGCCTGTAGTAGGTATCTGGTTTAACCGCATTAGGTA 18376552 Query 212390 TCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCAT 212449 || |||| ||||| |||||| ||||||| ||||| |||||||||| || |||||| Sbjct 18376551 TCAGCACCATGGCTTTCAACTTAAATGGTTTCAATTTCAACCAATATGTAGTTGATAGTC 18376492 Query 212450 CAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAG 212509 |||| || || || || | |||| || ||||| |||| |||||||||||||||| Sbjct 18376491 AAGGTCGTGTAATTAATATCTGAGCTGATATTATTAACCGAGCTAACCTTGGTATGGAAG 18376432 Query 212510 TTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGC 212552 |||| || ||| | ||||| || ||||||| || ||| |||| Sbjct 18376431 TTATACATGAACGTAATGCTCATAACTTCCATCTAGACCTAGC 18376389 >seq1 Length=36457581 Score = 132 bits (146), Expect = 8e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 212331 TTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTAT 212390 |||||| ||||| | || | |||||||| | || | ||||| ||| | | |||| Sbjct 19599371 TTTACATTTCTTTTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTTTACCGCGTTAGGTAC 19599430 Query 212391 CTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGTTGTTGATGCATC 212450 | | || ||||| ||||| ||||||| ||||| ||||||||||| | |||||| Sbjct 19599431 CAGTACCATGGCTTTCAATTTAAATGGTTTCAATTTCAACCAATCCATAGTTGATAGTCA 19599490 Query 212451 AGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGT 212510 |||| || || || |||| |||| || | ||| |||| |||||||| |||||||| Sbjct 19599491 AGGTCGTGTAATTAATATATGGGCTGATATTATAAACCGAGCTAACCTTGGCATGGAAGT 19599550 Query 212511 TATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAG 212551 |||||| ||| | ||||| || |||||||| || ||| ||| Sbjct 19599551 TATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAG 19599591 >seq5 Length=26376911 Score = 125 bits (138), Expect = 1e-23 Identities = 177/246 (72%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGT 211670 || |||||||||||| | |||||||| | ||| | | | ||||| | ||||| | Sbjct 10577337 GGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTAT 10577279 Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730 || ||||| || || | ||| || ||||| || || || ||||| || || |||| || Sbjct 10577278 CGCTTTCATTGCTGCCCTTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATC 10577219 Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790 | | || || ||||| || || || ||||| || |||| |||| || ||||| Sbjct 10577218 TCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGG 10577159 Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGG 211850 ||| ||||| || || || |||||||| ||| | ||||||| ||| | |||||||| || Sbjct 10577158 TTTGCACTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGG 10577099 Query 211851 TCCTTA 211856 |||||| Sbjct 10577098 TCCTTA 10577093 Score = 113 bits (124), Expect = 7e-20 Identities = 137/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 212366 GTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTAAATGGATTCAACT 212425 |||| ||||| | | | | ||||| | || ||| | ||||| ||||||| ||||| | Sbjct 10060432 GTGTCTGGTTTATCGCATTAGGTATTAGTACTATGACTTTCAATTTAAATGGTTTCAATT 10060373 Query 212426 TCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGGGGTGATGTTCTTA 212485 |||||||||| | |||||| |||| || || ||| ||| | | || ||| Sbjct 10060372 TCAACCAATCCATAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGACTATTATTATTA 10060313 Query 212486 ACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTCCCACTTG 212545 || |||| ||||||||||||||||||||||| ||| ||||| || |||||||| || | Sbjct 10060312 ACCGAGCTAACCTTGGTATGGAAGTTATGCATGAACATAATGCTCATAACTTCCCTCTAG 10060253 Query 212546 ACTTAGC 212552 || |||| Sbjct 10060252 ACCTAGC 10060246 >seq11 Length=35963958 Score = 118 bits (130), Expect = 2e-21 Identities = 258/384 (67%), Gaps = 2/384 (1%) Strand=Plus/Plus Query 194584 AAACCTGAGTATGTATTTCTTGCTGCTGCTAAGGTAGGTGGTATAGGTGGTAACTCTACC 194643 || || |||| ||| | | ||||| || || || ||||| || || ||| ||| Sbjct 32510857 AAGCCAGAGTTTGTCATAGTAGCTGCAGCCAAAGTTGGTGGCATCCATGCCAACAACACC 32510916 Query 194644 TATCCTGCCGATTTCATCTATGACAATCTGATGATTCAGACAAATGTTATTGATGCTGCA 194703 || || || |||||||| ||| || |||||||| || | || ||| |||| Sbjct 32510917 TACCCAGCTGATTTCATTGGCATCAACCTCCAAATTCAGACCAACATCATCGATTCTGCT 32510976 Query 194704 TATCGTAATGGAGTTAAGAAACTATTGTTTCTAGGTTCATCTTGCATCTATCCTAAGTTT 194763 ||||| ||||| ||||| || |||||| | ||||| |||||||| || ||||||||| Sbjct 32510977 TATCGCAATGGCACCAAGAAGCTCTTGTTTTTGGGTTCCTCTTGCATATACCCTAAGTTT 32511036 Query 194764 CCAAAGATACCTATTACAGAGGATCAGTTACTTGCTAGTCCTTTGGAAGAATCTAAT-AG 194822 || || || |||| ||| || ||| || || | || || | ||| | Sbjct 32511037 GCACCTCAGCCGATCCCAGAAGATGCTTTGCTTACTGGTACCTTAGAGCCCACAAATGAA 32511096 Query 194823 TGCTTATGCAATTGCAAAGATAGCAGGTATGAGGATGTGTCAAGCATATCGTCAGCAGTA 194882 || | | || ||||| ||||| || || || | ||||||||||| || || ||||| Sbjct 32511097 TGGT-ACGCGATTGCCAAGATTGCGGGGATCAAAATGTGTCAAGCTTACCGAATTCAGTA 32511155 Query 194883 TGGATTTAATGCAATATCATTAATGCCTACTAATCTATACGGACCTAATGATAATTTTGA 194942 | ||||||| ||| |||||| || || ||||| ||||| || || ||||| | Sbjct 32511156 CAAGTGGGATGCAATCTCAGGAATGCCGACAAACCTATATGGACCAAACGACAATTTCCA 32511215 Query 194943 TATTAATAATGGTCATGTATTACC 194966 | | ||| |||||| ||||| Sbjct 32511216 TCCCGAGAATTCTCATGTTTTACC 32511239 >seq3662 Length=122019 Score = 104 bits (114), Expect = 4e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 212353 TGGCCTGTTATCTGTGTATGGTTAACCTCTATGGGTATCTGCACAATGGCATTCAACCTA 212412 || ||||| | || | ||||| | | | | |||||| | || || || ||||| || Sbjct 4489 TGACCTGTAGTAGGTATCTGGTTTATCGCGTTAGGTATCAGTACTATAGCTTTCAATTTA 4548 Query 212413 AATGGATTCAACTTCAACCAATCAGTTGTTGATGCATCAGGTAAGGTTGTTCCTACTTGG 212472 ||||| || || ||||| |||| || |||||| |||| || || ||||| | Sbjct 4549 AATGGTTTTAATTTCAATTAATCCGTAGTTGATTGTCAAGGTCGTGTAATTAATACTTAG 4608 Query 212473 GGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACAC 212532 |||| || ||| | |||| |||||||||||||||||||| || ||| | ||||| || Sbjct 4609 ACTGATATTATTAGCTGAGCTAACCTTGGTATGGAAGTTATACATGAACGTAATGCTCAT 4668 Query 212533 AACTTCCCACTTGACTTAGC 212552 |||||||| | ||| |||| Sbjct 4669 AACTTCCCTTTAGACCTAGC 4688 >seq3 Length=30153019 Score = 98.7 bits (108), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 211612 GGTTGGTTTGGTGTTCTTATGATCCCATGTCTTCTAG-CTGCAACAACATGCTTTATCGT 211670 || |||||||||||| | |||||||| | ||| | | | ||||| | ||||| | Sbjct 19659768 GGATGGTTTGGTGTTTTGATGATCCC-TACCTTATTGACCGCAACTTCTGTATTTATTAT 19659826 Query 211671 AGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTC 211730 || ||||| || || ||||| || ||||| || || || ||||| || || |||| || Sbjct 19659827 CGCTTTCATTGCTGCCCCTCCAGTAGATATTGATGGTATTCGTGAGCCTGTTTCTGGATC 19659886 Query 211731 ATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGG 211790 | | || || ||||| || || || ||||| || |||| |||| || ||||| Sbjct 19659887 TCTACTTTACGGAAACAATATTATTTCGGGTGCTATTATTCCTACTTCTGCGGCTATCGG 19659946 Query 211791 TTTACACTTCTATCCTATCTGGGAAGCAGCA 211821 ||| ||||| || || || |||||||| ||| Sbjct 19659947 TTTGCACTTTTACCCGATATGGGAAGCGGCA 19659977 Score = 89.7 bits (98), Expect = 8e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 212466 TACTTGGGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAA 212525 |||||||| |||| || ||||| |||| ||| ||||||||||||||||||| ||| | || Sbjct 15965357 TACTTGGGCTGATATTATTAACCGAGCTAACATTGGTATGGAAGTTATGCATGAACGTAA 15965298 Query 212526 TGCACACAACTTCCCACTTGAC 212547 ||| || |||||||| || ||| Sbjct 15965297 TGCTCATAACTTCCCTCTAGAC 15965276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807418188165880