Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq9 100 3e-16
seq2 89.7 5e-13
>seq9
Length=21753712
Score = 100 bits (110), Expect = 3e-16
Identities = 168/240 (70%), Gaps = 5/240 (2%)
Strand=Plus/Plus
Query 21473 AAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTT 21532
||||| || ||||||||||| | |||||||| | ||| || || || || |||||
Sbjct 19303917 AAACAAGCGAAATCACAATGAAGCCCTTCATCTCGCGATATCAACTCGTTCGAGAATGTA 19303976
Query 21533 AAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCTGAAAA 21591
| |||||||||||| || | ||||| | ||||||||| | | || | || ||| || ||
Sbjct 19303977 AGACCGGGCATTAACCCGCGTTTTTTAAGCCAAAATATCG-CACAGAAGCTTCCAGAGAA 19304035
Query 21592 GAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATC 21651
|| || || |||||| |||||| ||||| | ||||| || | |||||| | |
Sbjct 19304036 AAATATTCCTTCAACGCAAGCAAAAGCAACGAGGCGTTCTGCGAA---GGATTCTGAACC 19304092
Query 21652 CAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGC 21711
|||||| | ||||||| || || | | ||| |||| ||| || ||||| ||
Sbjct 19304093 GTCGATCCATCGTAACGCCCATTCAGCTTTCTTTGTAACACAAGGAATGGTTTCAATCGC 19304152
>seq2
Length=24697652
Score = 89.7 bits (98), Expect = 5e-13
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Plus
Query 21468 ACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAA 21527
||| ||| || || |||||||| || ||||| ||||| | ||||| || || || |
Sbjct 21046905 ACAACAAGCACGCGAAATCACAGTGTAAACCCTCATCTCGCGAGATTAACTCGTTTGAGA 21046964
Query 21528 ATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGC-TCCT 21586
| || | ||| ||||| | |||| || || ||||||||||| | | || | || |||
Sbjct 21046965 AGGTAAGACCAGGCATAAGGCCTCGTTTCTTCAACCAAAATATCG-CACAGAAGCTTCCA 21047023
Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCG 21634
|| |||||||| || ||||| |||||| ||||| | |||||| ||
Sbjct 21047024 GAGAAGAAAATACCTTCAACACAAGCAAACGCAACGAGACGTTCAGCG 21047071
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531810556380520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |