Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq4 100 3e-16 seq19 82.4 7e-11 seq5 82.4 7e-11 >seq4 Length=27333975 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || |||||||| | || || ||| | || ||| | ||| | || Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || || |||||| || || ||||| || || || ||||| Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATA 26946 || ||| | |||| || || |||||||| ||||||| |||| | | ||| || |||| Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCT-AGCTGATTATA 24477567 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 | || || || ||||| || | || || || |||| ||||| ||||| Sbjct 24477568 ATATCCAGAAGGAATCAACACTTCACCTTGTGTTGAGGCTTAGGGGAGG 24477616 >seq19 Length=18159812 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || |||||||| | |||||| | || | || Sbjct 4941346 ATGCAAATCTTTGTGAAGACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 4941405 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | |||||| |||||| ||||| || || || || || ||||| Sbjct 4941406 GACACCATCGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCACCAGATCAG 4941465 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || || || || | | ||||| || || || |||| | | ||| | || || ||||| Sbjct 4941466 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGTCG-AACTTTGGCTGATTATAA 4941524 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||| || || || || || ||||||| ||| || Sbjct 4941525 CATCCAGAAGGAGTCCACCCTCCATCTTGTCTTG 4941558 >seq5 Length=26376911 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| || || || || ||||| | ||||| | ||| | || Sbjct 2894150 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCT 2894091 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || ||| |||||||| || || || || || ||| Sbjct 2894090 GACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAA 2894031 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 || || || |||| | ||||| |||||||| |||| | | | | | ||| |||||||| Sbjct 2894030 CAGAGGCTTATTTTTGCTGGCAAGCAACTCGAGGATGGTCGTACCTT-AGCTGACTATAA 2893972 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||| || ||||| || ||| |||| || ||| || Sbjct 2893971 CATCCAGAAAGAGTCAACTCTCCACCTTGTCTTG 2893938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478581188940560