Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq9 163 7e-35 seq2 161 3e-34 seq11 147 6e-30 seq2896 111 4e-19 seq1 100 7e-16 seq8 93.3 1e-13 >seq9 Length=21753712 Score = 163 bits (180), Expect = 7e-35 Identities = 377/564 (67%), Gaps = 7/564 (1%) Strand=Plus/Minus Query 22402 TTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAA 22461 ||||||| ||||||| ||||||| | ||| || || || || |||||| | | Sbjct 19304161 TTATTCCACGCGATTGAAACCATTCCTTGTGTTACAAAGAAAGCTGAATGGGCGTTACGA 19304102 Query 22462 TGGATGAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGC 22521 ||||| || | | || ||||| ||||| || |||| |||||| |||||||| Sbjct 19304101 TGGATCGACGGTTCAGAATCCTTCGCAGAACGCCTCGTTGCTTTTGCTTGCGTTGAAGGA 19304042 Query 22522 ATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCG 22581 || || || |||||| || ||||| || |||||||| |||||||| | | ||||| Sbjct 19304041 ATATTTTTCTCTGGAAGCTTCTGTGCGATATTTTGGCTTAAAAAACGCGGGTTAATGCCC 19303982 Query 22582 GGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCG 22641 ||||| || || || || ||||| || |||||||| || |||||| ||||| || Sbjct 19303981 GGTCTTACATTCTCGAACGAGTTGATATCGCGAGATGAAGGGCTTCATTGTGATTTCGCT 19303922 Query 22642 TGTATGCTATA-TCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACTTGATAT 22700 ||| | |||| || || || | | || |||||| | || ||| | || Sbjct 19303921 TGTTTATTATACTC----TCTAATGAAGAAGAAGCTTCCAGAGGAGCGTGTGAAGGGAAT 19303866 Query 22701 TATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACCA-GTAAGTC 22759 | || | ||||| || | || | ||| | || || ||| | ||| || || Sbjct 19303865 TGTTCGTGACGCAGTGGAGATCGAGAGAGAGTTTGTGTGTGACGCGCTTCCATGTGCGT- 19303807 Query 22760 TCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTAT 22819 | | || || |||| | | |||||| ||||| | |||||||| ||| | ||| Sbjct 19303806 TGGTGGGAATGAATGGGGTTTTGATGAGTCAGTATATAGAGTTTGTTGCGGATAGGTTAT 19303747 Query 22820 TAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAAC 22879 | | | || || | || ||| ||| | || || || ||||| |||||||||| Sbjct 19303746 TGGGTGCGCTTGGGTGTGGGAAGGTGTATGAAGTGCAGAACCCTTTTGATTGGATGGAAC 19303687 Query 22880 TTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAG 22939 | ||||| ||| |||| ||||| |||||||| || || || ||||| ||||| ||||| | Sbjct 19303686 TGATTTCGCTTCAAGGGAAGACTAATTTCTTTGAGAAGAGGGTTGGGGAATATCAAAAGG 19303627 Query 22940 CAGGTGTTATGGATGCATTGAATG 22963 | ||||||| | ||||||| Sbjct 19303626 CTTCTGTTATGTCTAGCTTGAATG 19303603 >seq2 Length=24697652 Score = 161 bits (178), Expect = 3e-34 Identities = 330/486 (68%), Gaps = 7/486 (1%) Strand=Plus/Minus Query 22480 TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 || ||||| |||||||| |||| |||||| |||||||| |||||||| |||||| Sbjct 21047076 TCCTTCGCTGAACGTCTCGTTGCGTTTGCTTGTGTTGAAGGTATTTTCTTCTCTGGAAGC 21047017 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 || ||||| || |||||| | || ||||| | ||||||| ||||| || || ||||| Sbjct 21047016 TTCTGTGCGATATTTTGGTTGAAGAAACGAGGCCTTATGCCTGGTCTTACCTTCTCAAAC 21046957 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA-TCGGAA 22658 |||||||| |||||||||||| | || ||||| ||||| || | || || Sbjct 21046956 GAGTTAATCTCGCGAGATGAGGGTTTACACTGTGATTTCGCGTGCTTGTTGTACTC---- 21046901 Query 22659 TCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718 || || | | | || |||||| | || || | ||| | |||| ||||| Sbjct 21046900 TCTAATGAATAAGAAGCTTCCAGAAGAGCGCGTGAAGGGGATTGTGCGTGATGCGGTTGA 21046841 Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCA-GTAAGTCTCATTGGTATCAATGCCG 22777 | | || | ||| | || || ||| | ||| | || | | || || |||| | Sbjct 21046840 AATAGAGAGGGAGTTTGTGTGTGACGCGCTTCCATGCGCGT-TGGTGGGGATGAATGGGG 21046782 Query 22778 AATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATG 22837 | |||||| ||||||| | || || || ||| | |||| | | || || | || Sbjct 21046781 GTTTGATGAGTCAATATATTGAGTTCGTAGCTGATAGGTTATTGGGTGCGCTTGGGTGTG 21046722 Query 22838 CAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAA 22897 ||| ||| | || || || ||||| ||||||||| | ||||| ||| | || | Sbjct 21046721 GGAAGGTGTATGATGTGCAAAACCCTTTTGATTGGATGGAATTGATTTCGCTTCAGGGGA 21046662 Query 22898 AGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATGCAT 22957 |||| |||||||| || || || |||||||||||||| ||||| ||||||| | | Sbjct 21046661 AGACTAATTTCTTTGAGAAGAGGGTTGGTGAATACCAGAAAGCTTCTGTTATGTCTAGCT 21046602 Query 22958 TGAATG 22963 |||||| Sbjct 21046601 TGAATG 21046596 >seq11 Length=35963958 Score = 147 bits (162), Expect = 6e-30 Identities = 319/473 (67%), Gaps = 7/473 (1%) Strand=Plus/Plus Query 22480 TCATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA 22539 || ||||| || || ||| |||| |||||| |||||||| |||||||| |||||| Sbjct 2850570 TCCTTCGCTGAGCGCCTTGTTGCGTTTGCTTGTGTTGAAGGAATTTTCTTCTCTGGAAGC 2850629 Query 22540 TTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAAT 22599 || ||||| || || ||||| || || | | ||||||| || || || || ||||| Sbjct 2850630 TTCTGTGCTATATTCTGGCTTAAGAAGAGAGGTCTTATGCCTGGACTTACCTTCTCAAAC 2850689 Query 22600 GAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATA-TCGGAA 22658 ||||| || |||||||| || |||||| ||||| || || || | || || Sbjct 2850690 GAGTTGATATCGCGAGATGAAGGGCTTCATTGTGATTTCGCTTGCTTGTTGTACTC---- 2850745 Query 22659 TCATATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGA 22718 || || | |||| ||| || | || ||| | ||| | |||| || || Sbjct 2850746 TCTAATGAAGAATAAGCTTTCAGAGGAGCGTGTGAAGGGGATTGTGCGTGATGCTGTGGA 2850805 Query 22719 ACTTGAACGTCTATTTATTTGCGAGGCGTTACCA-GTAAGTCTCATTGGTATCAATGCCG 22777 | || | ||| |||| || || | ||| || || | |||| || |||| | Sbjct 2850806 GATAGAGAGGGAGTTTGTTTGTGACGCACTTCCATGTGCGT-TGGTTGGGATGAATGGGG 2850864 Query 22778 AATCAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATG 22837 | |||||| ||||||| | |||||||| ||| | |||| | | || || | || Sbjct 2850865 TTTTGATGAGTCAATATATTGAGTTTGTTGCGGATAGGTTATTGGGTGCGCTTGGGTGTG 2850924 Query 22838 CAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAA 22897 ||| ||| | || || || ||||| ||||||||||| ||||| ||| |||| | Sbjct 2850925 GTAAGGTGTATGATGTGCAGAACCCGTTTGATTGGATGGAACTAATTTCGCTTCAAGGGA 2850984 Query 22898 AGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 |||| |||||||| || || || |||||||| || || ||||| ||||||| Sbjct 2850985 AGACTAATTTCTTTGAGAAGAGGGTTGGTGATTATCAGAAAGCTTCTGTTATG 2851037 Score = 87.8 bits (96), Expect = 5e-12 Identities = 164/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| || ||||| || | ||| || | ||| | Sbjct 31406606 TTGCTTCCTTGTGTGTATGAAAGATGATAGTATAGAGGGAATATATGATACTTTGAAGGA 31406665 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG- 363724 |||||| || ||| || || ||||||||||| || | ||||| | || | Sbjct 31406666 GTGTGCTGCGATCAGCAAATCAGCTGGAGGAATTGGTGTTTCTGTTCACAACATCCGAGC 31406725 Query 363725 CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 ||||| ||||||||| || || || | |||| | || ||||| | ||||| ||||| Sbjct 31406726 CACAG-GCAGTTACATCCGGGGAACTAATGGGACA-TCCAATGGTATTGTTCCAATGCTG 31406783 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 ||||| ||| | ||||||| | || || || || |||||||| ||| | ||||| Sbjct 31406784 CGTGTTTTTAATGATACTGCTCGCTATGTTGATCAAGGTGGAGGCAAGAGGAAAGG 31406839 >seq2896 Length=25968 Score = 111 bits (122), Expect = 4e-19 Identities = 176/247 (71%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 363595 CAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGAC 363654 |||||| | |||||| ||| | ||||| || ||| || |||||||| | ||| Sbjct 4549 CAGATGAGTAGTTGCTTCCTTGTGTGCATGAAAGATGATAGTATAGAGGGTATATATGAA 4608 Query 363655 ACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCAC 363714 || | || | |||||| | || || || || ||||||||||| || | ||| Sbjct 4609 ACTTTGAAAGAGTGTGCTGTCATCAGTAAATCAGCTGGAGGAATTGGTGTCTCTGTTCAC 4668 Query 363715 AATGTTCGTG-CACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGG 363772 ||| |||||| ||||| |||||||||||| || || | |||| | || ||||| | Sbjct 4669 AATATTCGTGCCACAG-GCAGTTACATTCGTGGGACAAATGGGACA-TCCAATGGCATTA 4726 Query 363773 TTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGC 363832 |||| ||||| |||||||| | |||||||| | || || || || |||||||||||| Sbjct 4727 TTCCAATGCTGCGTGTGTTCAATGATACTGCGCGCTATGTTGATCAAGGTGGAGGAAAGA 4786 Query 363833 GCAAAGG 363839 | ||||| Sbjct 4787 GGAAAGG 4793 >seq1 Length=36457581 Score = 100 bits (110), Expect = 7e-16 Identities = 167/236 (71%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 |||||| ||| | ||||| || ||| || ||||| || | ||| || | ||| | Sbjct 33689298 TTGCTTCCTTGTGTGTATGAAAGATGATAGTATAGAGGGAATATATGATACTTTGAAGGA 33689239 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC 363725 |||||| || ||| || || ||||||||||| || | ||||| ||||||| Sbjct 33689238 GTGTGCTGCAATCAGCAAATCAGCTGGAGGAATTGGTGTTTCTGTTCACAACATTCGTGC 33689179 Query 363726 -ACAGAACAGTTACATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 |||| ||||||||||| || || | |||| | || ||||| | ||||| ||||| Sbjct 33689178 CACAGGG-AGTTACATTCGTGGAACTAATGGGACA-TCCAATGGTATTGTTCCAATGCTG 33689121 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||||||| | ||||||| | || || || ||||||||||| ||| | ||||| Sbjct 33689120 CGTGTGTTCAATGATACTGCCCGCTATGTTGATCAGGGTGGAGGCAAGAGGAAAGG 33689065 >seq8 Length=25521646 Score = 93.3 bits (102), Expect = 1e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 111691 ATCTTATGTGCCAGTTTTATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGAT 111750 || |||| | ||||| |||||| | ||| | | || |||||||||||||| |||| Sbjct 24540643 ATTTTATTTTGCAGTTCTATGTAGCAAATGGGGAGTTATCCTGCCAAATGTATCAACGAT 24540584 Query 111751 CTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCT 111810 ||||||| || || || ||||| |||||||| |||||| ||| || || || || ||| Sbjct 24540583 CTGCTGACATGGGCCTGGGTGTGCCGTTTAACATTGCATCTTATGCGCTGCTGACATGCA 24540524 Query 111811 TAATCGCTCATTTT 111824 | || |||||| || Sbjct 24540523 TGATTGCTCATGTT 24540510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303126941514086