Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 9e-22
seq6 100 2e-16
seq5 89.7 4e-13
seq19 84.2 2e-11
>seq4
Length=27333975
Score = 118 bits (130), Expect = 9e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049
||||||| | || |||||||| | || || ||| | || ||| | ||||| |||
Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448
Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109
|||||||||||| | || || |||||| || || ||||| || || || |||||
Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508
Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168
|||||| |||||| || || || ||||| ||||||| |||| | | ||| |||||||
Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCT-AGCTGATTATA 24477567
Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
| || || || ||||| ||| |||| | ||||| || | || |||||
Sbjct 24477568 ATATCCAGAAGGAATCAACACTTCACCTTGTGTTGAGGCTTAGGGGAGG 24477616
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || | ||||| || | || ||| | || || ||| |
Sbjct 3993539 ATGCAAATCTTTGTCAAGACTCTTACTGGTAAGACCATCACCCTTGAGGTTGAGAGCTCG 3993598
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || || ||||| ||||| || ||||| ||||| || ||
Sbjct 3993599 GACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 3993658
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | | || ||||| ||||| |||| | ||| | | ||||||||||
Sbjct 3993659 CAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGAACCCTTGCCGATTATAAC 3993718
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
|| || || || || || | ||||| |||
Sbjct 3993719 ATCCAGAAGGAGTCCACTCTCCATTTGGTG 3993748
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | ||||| || || | || ||||| | |||||| |||| || ||| | |
Sbjct 3993995 ATGCAGATTTTTGTGAAGACCCTTACAGGAAAGACCATTACCCTCGAGGTTGAGAGCTCC 3994054
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|| |||||||| | || || ||||| ||||| ||||| || || || || ||
Sbjct 3994055 GATACCATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCAG 3994114
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| |||||| | || |||||||||||||||| || | | || ||||||
Sbjct 3994115 CAGAGGTTGATTTTTGCTGGTAAGCAACTCGAAGATGGAAGGACTCTTGCTGACTATAAC 3994174
Query 24171 ATTCAAAAAGAATCTACAATTCA 24193
|| || || || ||||| ||||
Sbjct 3994175 ATCCAGAAGGAGTCTACCCTTCA 3994197
>seq6
Length=33111450
Score = 100 bits (110), Expect = 2e-16
Identities = 142/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047
|| ||||| | ||||| ||||| |||| || ||| | || ||| |||| || ||| ||
Sbjct 5099643 AAGATGCAGATCTTTGTGAAAACCCTAACGGGTAAAACCATAACCCTCGAGGTTGAGTCC 5099702
Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107
||||||||||| | ||||| ||||| ||||| ||||| || || || ||
Sbjct 5099703 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGAC 5099762
Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167
|| ||| ||||||| | || ||| |||||||| || || | | | | | || ||||||
Sbjct 5099763 CAGCAGCGACTGATCTTCGCCGGAAAGCAACTTGAGGACGGCCGCACCCTCGCCGATTAC 5099822
Query 24168 AACATTCAAAAAGAATCTAC 24187
|| || || || ||||| ||
Sbjct 5099823 AATATCCAGAAGGAATCAAC 5099842
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| ||||| ||||||| || | || ||| | || || ||
Sbjct 6668878 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 6668937
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || || ||||| || || || || || || || ||||||
Sbjct 6668938 GACACCATTGACAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATTCCACCAGATCAA 6668997
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
||||| || || | | || |||||||| ||||||| || || | || ||||||||
Sbjct 6668998 CAGAGGCTTATATTTGCTGGAAAGCAACTTGAAGATGGAAG-GACTTTGGCAGATTATAA 6669056
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218
||| || || || ||||| ||||||| || | | ||||| ||||||
Sbjct 6669057 CATCCAGAAGGAGTCTACTCTTCATTTGGTACTGCGTTTGAGGGGAGGA 6669105
>seq5
Length=26376911
Score = 89.7 bits (98), Expect = 4e-13
Identities = 148/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || || ||||| | || || | ||||| |||
Sbjct 2894378 ATGCAAATATTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCG 2894319
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | || || || ||| |||||||| ||||| || ||||| |||
Sbjct 2894318 GACACCATAGATAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 2894259
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
|||||||| || | | |||||||| || || |||| | | || | ||| || || ||
Sbjct 2894258 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCG-GACCTTAGCTGACTACAA 2894200
Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||| || || ||||| || | |||||||||
Sbjct 2894199 CATCCAGAAGGAATCCACTCTCCATTTAGTG 2894169
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || || ||||| | || || | ||||| ||| |
Sbjct 2894150 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCT 2894091
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||| || || | || || || ||| |||||||| ||||| || || || |||
Sbjct 2894090 GACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAA 2894031
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
||||| || |||| | |||||||||||||| |||| | || | ||| || |||||
Sbjct 2894030 CAGAGGCTTATTTTTGCTGGCAAGCAACTCGAGGATGGTCG-TACCTTAGCTGACTATAA 2893972
Query 24170 CATTCAAAAAGAATCTAC 24187
||| || ||||| || ||
Sbjct 2893971 CATCCAGAAAGAGTCAAC 2893954
>seq19
Length=18159812
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || |||||||| | || ||| | || || |||
Sbjct 4941346 ATGCAAATCTTTGTGAAGACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 4941405
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | |||||| |||||| ||||| || || || || || |||||
Sbjct 4941406 GACACCATCGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCACCAGATCAG 4941465
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169
||||| || || | | |||||||| || || |||| | ||| | || ||||||||
Sbjct 4941466 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGTCG-AACTTTGGCTGATTATAA 4941524
Query 24170 CATTCAAAAAGAATCTAC 24187
||| || || || || ||
Sbjct 4941525 CATCCAGAAGGAGTCCAC 4941542
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
|||||| | ||||| || || || || ||||| | || ||| | || || ||| |
Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
|||||||| || | |||||| |||||| ||||| || || || || ||||||||
Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||||| || || | | |||||||| || || || | ||| | ||||||||||
Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069
Query 24171 ATTCAAAAAGAATCTACAATTCA 24193
|| || || || || || ||||
Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCA 4941092
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429864879583815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |