Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq4 118 9e-22 seq6 100 2e-16 seq5 89.7 4e-13 seq19 84.2 2e-11 >seq4 Length=27333975 Score = 118 bits (130), Expect = 9e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || |||||||| | || || ||| | || ||| | ||||| ||| Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | || || |||||| || || ||||| || || || ||||| Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATA 24168 |||||| |||||| || || || ||||| ||||||| |||| | | ||| ||||||| Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCT-AGCTGATTATA 24477567 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 | || || || ||||| ||| |||| | ||||| || | || ||||| Sbjct 24477568 ATATCCAGAAGGAATCAACACTTCACCTTGTGTTGAGGCTTAGGGGAGG 24477616 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| || | || ||| | || || ||| | Sbjct 3993539 ATGCAAATCTTTGTCAAGACTCTTACTGGTAAGACCATCACCCTTGAGGTTGAGAGCTCG 3993598 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| ||||| || ||||| ||||| || || Sbjct 3993599 GACACCATTGATAATGTTAAGGCTAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 3993658 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | || ||||| ||||| |||| | ||| | | |||||||||| Sbjct 3993659 CAGAGGCTTATCTTTGCTGGAAAGCAGCTCGAGGATGGCCGAACCCTTGCCGATTATAAC 3993718 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || || || || | ||||| ||| Sbjct 3993719 ATCCAGAAGGAGTCCACTCTCCATTTGGTG 3993748 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || ||||| | |||||| |||| || ||| | | Sbjct 3993995 ATGCAGATTTTTGTGAAGACCCTTACAGGAAAGACCATTACCCTCGAGGTTGAGAGCTCC 3994054 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || |||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 3994055 GATACCATCGATAATGTGAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCAGACCAG 3994114 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| |||||| | || |||||||||||||||| || | | || |||||| Sbjct 3994115 CAGAGGTTGATTTTTGCTGGTAAGCAACTCGAAGATGGAAGGACTCTTGCTGACTATAAC 3994174 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || || ||||| |||| Sbjct 3994175 ATCCAGAAGGAGTCTACCCTTCA 3994197 >seq6 Length=33111450 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || ||||| | ||||| ||||| |||| || ||| | || ||| |||| || ||| || Sbjct 5099643 AAGATGCAGATCTTTGTGAAAACCCTAACGGGTAAAACCATAACCCTCGAGGTTGAGTCC 5099702 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 ||||||||||| | ||||| ||||| ||||| ||||| || || || || Sbjct 5099703 TCTGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAAGGAATCCCACCGGAC 5099762 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 || ||| ||||||| | || ||| |||||||| || || | | | | | || |||||| Sbjct 5099763 CAGCAGCGACTGATCTTCGCCGGAAAGCAACTTGAGGACGGCCGCACCCTCGCCGATTAC 5099822 Query 24168 AACATTCAAAAAGAATCTAC 24187 || || || || ||||| || Sbjct 5099823 AATATCCAGAAGGAATCAAC 5099842 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||||| || | || ||| | || || || Sbjct 6668878 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 6668937 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || ||||| || || || || || || || |||||| Sbjct 6668938 GACACCATTGACAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATTCCACCAGATCAA 6668997 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | | || |||||||| ||||||| || || | || |||||||| Sbjct 6668998 CAGAGGCTTATATTTGCTGGAAAGCAACTTGAAGATGGAAG-GACTTTGGCAGATTATAA 6669056 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| || || || ||||| ||||||| || | | ||||| |||||| Sbjct 6669057 CATCCAGAAGGAGTCTACTCTTCATTTGGTACTGCGTTTGAGGGGAGGA 6669105 >seq5 Length=26376911 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || ||||| | || || | ||||| ||| Sbjct 2894378 ATGCAAATATTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTTGAGAGTTCG 2894319 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || || ||| |||||||| ||||| || ||||| ||| Sbjct 2894318 GACACCATAGATAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCCGACCAA 2894259 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||||| || | | |||||||| || || |||| | | || | ||| || || || Sbjct 2894258 CAGAGACTTATCTTTGCTGGCAAGCAGCTTGAGGATGGCCG-GACCTTAGCTGACTACAA 2894200 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||| || || ||||| || | ||||||||| Sbjct 2894199 CATCCAGAAGGAATCCACTCTCCATTTAGTG 2894169 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || ||||| | || || | ||||| ||| | Sbjct 2894150 ATGCAAATCTTTGTCAAGACCTTGACCGGAAAGACCATCACACTTGAAGTGGAGAGCTCT 2894091 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || || ||| |||||||| ||||| || || || ||| Sbjct 2894090 GACACAATTGACAATGTGAAGGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAA 2894031 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || |||| | |||||||||||||| |||| | || | ||| || ||||| Sbjct 2894030 CAGAGGCTTATTTTTGCTGGCAAGCAACTCGAGGATGGTCG-TACCTTAGCTGACTATAA 2893972 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || ||||| || || Sbjct 2893971 CATCCAGAAAGAGTCAAC 2893954 >seq19 Length=18159812 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || |||||||| | || ||| | || || ||| Sbjct 4941346 ATGCAAATCTTTGTGAAGACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGTTCT 4941405 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | |||||| |||||| ||||| || || || || || ||||| Sbjct 4941406 GACACCATCGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATTCCACCAGATCAG 4941465 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 ||||| || || | | |||||||| || || |||| | ||| | || |||||||| Sbjct 4941466 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGATGGTCG-AACTTTGGCTGATTATAA 4941524 Query 24170 CATTCAAAAAGAATCTAC 24187 ||| || || || || || Sbjct 4941525 CATCCAGAAGGAGTCCAC 4941542 Score = 82.4 bits (90), Expect = 7e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || || || ||||| | || ||| | || || ||| | Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | |||||| |||||| ||||| || || || || |||||||| Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| || || | | |||||||| || || || | ||| | |||||||||| Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || || || || || || |||| Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCA 4941092 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429864879583815