Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq18 159 3e-34 seq17 141 9e-29 seq3 141 9e-29 seq6 140 3e-28 seq19 120 3e-22 seq20 116 3e-21 seq4 116 3e-21 seq5 104 2e-17 seq12525 91.5 1e-13 >seq18 Length=16588007 Score = 159 bits (176), Expect = 3e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | || || || | || | |||||||||||| ||||| ||||||||| Sbjct 12189666 GCCACCGCGGAGGCGGAGGACAAGGTGGAGGGTCGACTCCTTCTGAATATTGTAATCGGC 12189725 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||| || || || || || ||| |||| ||||||||||||||||| || Sbjct 12189726 GAGAGTGCGACCGTCTTCGAGTTGTTTTCCGGCGAAGATCAAACGCTGCTGGTCCGGTGG 12189785 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| || ||||| | || | ||||||| ||| || | Sbjct 12189786 AATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAAC 12189845 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||||||||| ||||| ||||| ||||| |||||||| Sbjct 12189846 CTCGAGGGTAATGGTTTTACCCGTTAGGGTTTTCACGAAGATCTGCAT 12189893 >seq17 Length=21299880 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | ||| || ||||| || |||||||| ||| Sbjct 4985042 GCCACCACGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 4984983 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||| || ||||| || || ||| |||| | ||||||||||||||| || Sbjct 4984982 GAGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 4984923 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | || | ||||||| ||| || | Sbjct 4984922 GATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAAC 4984863 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | |||||| || ||||| ||||| ||||| |||||||| Sbjct 4984862 TTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 4984815 >seq3 Length=30153019 Score = 141 bits (156), Expect = 9e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | || || || | || | ||| || ||||| || |||||||| ||| Sbjct 15142492 GCCACCACGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTGTAGTCGGC 15142551 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||| || ||||| || || ||| |||| | ||||||||||||||| || Sbjct 15142552 GAGGGTGCGACCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 15142611 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||| ||||| ||| || ||||| | || | ||||||| ||| || | Sbjct 15142612 GATTCCTTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTATCGGAGGATTCAAC 15142671 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | |||||| || ||||| ||||| ||||| |||||||| Sbjct 15142672 TTCGAGGGTGATGGTTTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 15142719 >seq6 Length=33111450 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | ||| || ||||| || || ||||||||| Sbjct 5099872 CCACCGCGGAGGCGGAGGACAAGGTGGAGGGTTGATTCCTTCTGGATATTGTAATCGGCG 5099813 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || ||||| || ||| |||| | |||||||||||||| ||| Sbjct 5099812 AGGGTGCGGCCGTCCTCAAGTTGCTTTCCGGCGAAGATCAGTCGCTGCTGGTCCGGTGGG 5099753 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||||| | || | || || | |||||| | Sbjct 5099752 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACC 5099693 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||||||||| ||||| ||||| || || |||||||| Sbjct 5099692 TCGAGGGTTATGGTTTTACCCGTTAGGGTTTTCACAAAGATCTGCAT 5099646 >seq19 Length=18159812 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||| || || ||| Sbjct 4941344 CCACCACGGAGACGAAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCT 4941285 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| ||| ||||| ||||||||||| ||| |||| | |||||||||||||||||| Sbjct 4941284 -AGGGTACGCCCATCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGG 4941226 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| || || ||| || ||| | | || | || || | ||| | Sbjct 4941225 GATACCTTCCTTATCCTGGATCTTGGCCTTCACATTGTCGATTGTGTCCGAACTCTCTAC 4941166 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || ||||| || || ||||||||||| Sbjct 4941165 CTCCAAAGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAAATCTGCAT 4941118 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||| || || | Sbjct 4940888 CCACCACGAAGACGGAGCACCAAATGAAGGGTGGACTCCTTTTGGATGTTATAGTCTGCC 4940829 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| |||||||| || ||| |||| | ||||||||| || || ||| Sbjct 4940828 AGGGTACGCCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCTGGTGGG 4940769 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | ||||| | ||| | Sbjct 4940768 ATACCTTCCTTATCCTGGATCTTAGCCTTCACATTATCTATGGTATCTGAACTCTCAACT 4940709 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || ||||| || ||||| Sbjct 4940708 TCGAGAGTGATGGTCTTGCCAGTAAGGGTCTTAACGAAGATTTGCAT 4940662 >seq20 Length=21988590 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | || || || | || | ||| |||||||| || |||||||| ||| Sbjct 4225089 CCGCCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 4225148 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || || ||||| || ||| |||| | |||||||||||||| ||| Sbjct 4225149 AGGGTGCGACCGTCTTCCAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTGGTCCGGTGGG 4225208 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| || || ||| | | || | || || | ||| || | Sbjct 4225209 ATTCCTTCCTTGTCCTGAATCTTGGCCTTCACATTGTCAATTGTGTCTGAGGATTCAACC 4225268 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||||| || ||||| ||||| ||||| |||||||| Sbjct 4225269 TCGAGGGTTATTGTTTTCCCAGTTAGGGTTTTCACGAAGATCTGCAT 4225315 >seq4 Length=27333975 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | || | ||| |||||||| || |||||||| ||| Sbjct 22406937 CCACCGCGGAGGCGGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 22406878 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||| || ||||| || || ||| |||| | || ||||||||||| || Sbjct 22406877 AGGGTGCGACCGTCTTCGAGCTGTTTTCCGGCGAAGATGAGGCGTTGCTGGTCCGGTGGA 22406818 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 |||||||| ||||| ||| || ||| | | || | || |||| || || | Sbjct 22406817 ATTCCTTCCTTGTCTTGGATCTTGGCCTTCACATTGTCGATTGTGTCGGAAGATTCAACC 22406758 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || ||||| ||||| ||||| |||||||||||||| Sbjct 22406757 TCAAGGGTTATCGTCTTACCCGTTAGGGTTTTCACGAAAATCTGCAT 22406711 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | ||| || || | || | || ||||||||||| |||||||| || Sbjct 3993310 GCCACCGCGAAGACGGAGGACAAGGTGGAGTGTGGACTCCTTTTGTATGTTGTAGTCAGC 3993251 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||| || |||| | ||| ||||| ||||| || Sbjct 3993250 AAGAGTGCGACCATCCTCAAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGATCCGGTGG 3993191 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || ||| | | || | || |||| ||| | Sbjct 3993190 GATCCCTTCCTTGTCTTGGATCTTAGCCTTCACGTTGTCGATGGTGTCGGAACTCTCTAC 3993131 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| || ||||| ||||| || ||||| Sbjct 3993130 CTCGAGAGTGATGGTCTTGCCGGTGAGGGTTTTCACGAAGATTTGCAT 3993083 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| || || || || || ||||| ||| Sbjct 24477388 CCTCCACGGAGACGGAGGACGAGGTGGAGGGTTGATTCTTTCTGGATATTGTAGTCGGCG 24477329 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||||||||| || || ||| |||| | |||||||||||| || || Sbjct 24477328 AGGGTGCGACCGTCCTCTAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCAGGTGGA 24477269 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| ||||| ||| | | || || | | || | || |||| | ||| | Sbjct 24477268 ATTCCTTCCTTGTC-CTGAATCTTAGCTTTTACGTTATCGATTGTGTCGGAGCTCTCCAC 24477210 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || |||||||| ||||| ||||| || ||||| Sbjct 24477209 CTCTAGGGTGATGGTCTTTCCGGTTAGGGTTTTCACGAAGATTTGCAT 24477162 >seq5 Length=26376911 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| ||||||||||| ||||||||||| Sbjct 2894380 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCA 2894439 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| ||| ||||| || |||||||| || | || | |||||| ||||| || ||| Sbjct 2894440 AGGGTACGCCCATCCTCAAGTTGCTTGCCAGCAAAAATGAGACGCTGTTGGTCTGGTGGG 2894499 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| ||| | | || | ||||| | ||| | Sbjct 2894500 ATCCCTTCCTTGTCTTGAATTTTAGCCTTTACATTATCTATGGTATCAGAACTCTCAACT 2894559 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || || || || || || || ||||| Sbjct 2894560 TCGAGAGTGATGGTCTTGCCAGTGAGTGTCTTAACAAAGATTTGCAT 2894606 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCT 131066 ||||| || | ||| ||||||||||| | || || ||||| || |||||||| || ||| Sbjct 2894152 CCACCACGAAGACGAAGCACTAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCT 2894211 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| ||||||||||| || |||| | | ||| ||||| || || Sbjct 2894212 -AAGGTCCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGTTGGTCGGGTGG 2894270 Query 131127 GATTCCTTCTTTGTC 131141 ||| || |||||||| Sbjct 2894271 GATGCCCTCTTTGTC 2894285 >seq12525 Length=279716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | || | ||| |||||||| ||||||||||| || Sbjct 230703 CCACCACGAAGACGCAGCACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 230644 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | || || |||||||| || || |||| || | ||| ||||| || ||| Sbjct 230643 AGGGTCCTTCCATCTTCAAGCTGCTTTCCAGCAAAGATCAACCTCTGTTGGTCTGGGGGG 230584 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || ||| | | || ||| | | || | |||||| | ||| | Sbjct 230583 ATTCCTTCCTTATC-CTGAATCTTTGCCTTCACATTATCAATAGTATCCGAACTCTCAAC 230525 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| ||||| || || | || || || |||||||||||| Sbjct 230524 CTCAAGAGTAATAGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCATG 230476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471932717128320