Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 4e-19
seq19 89.7 4e-13
>seq5
Length=26376911
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || || ||||| || || ||||| ||||| || | ||| | ||||| | |||
Sbjct 2893948 TGGAGAGTTGACTCTTTCTGGATGTTATAGTCAGCTAAGGTACGACCATCCTCGAGTTGC 2894007
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852
||||| ||| ||||||||| ||||||||| || | |||||||||||| |||||
Sbjct 2894008 TTGCCAGCAAAAATAAGCCTCTGTTGGTCTGGTGGGATGCCCTCTTTGTCTTGAATTTTG 2894067
Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912
|||||| | | | | ||||| | |||| ||| | |||||||| |||||||||
Sbjct 2894068 GCCTTCACATTGTCAATTGTGTCAGAGCTCTCCACTTCAAGTGTGATGGTCTTTCCGGTC 2894127
Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935
| || |||||||| || |||||
Sbjct 2894128 AAGGTCTTGACAAAGATTTGCAT 2894150
Score = 98.7 bits (108), Expect = 8e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783
|| || | ||| || ||||| ||||| || ||||||||||| || | ||| | | |||
Sbjct 2894167 AGCACTAAATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCAGCTAAGGTCCGGCCATCC 2894226
Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843
|| | || ||||| ||| | ||||| | ||||||||| || | ||||||||||||
Sbjct 2894227 TCAAGCTGCTTGCCAGCAAAGATAAGTCTCTGTTGGTCGGGTGGGATGCCCTCTTTGTCT 2894286
Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903
||||| |||||| | | | ||||| ||| ||| | ||||||||
Sbjct 2894287 TGAATTTTGGCCTTCACATTATCTATGGTGTCCGAACTCTCAACTTCAAGTGTGATGGTC 2894346
Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||||||||| || |||||||| || |||||
Sbjct 2894347 TTTCCGGTCAAGGTCTTGACAAATATTTGCAT 2894378
Score = 91.5 bits (100), Expect = 1e-13
Identities = 163/234 (70%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 16707 ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGG 16766
||||||| || || | | || | || || |||||||||||||| ||||||||||| |
Sbjct 2893466 ACCCTCCACGAAGACGTAAAACAAGGTGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAG 2893525
Query 16767 CCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAG 16826
| | ||| | | |||||||| || || || ||| | || | || ||| |||||| |
Sbjct 2893526 CAAGGGTCCTTCCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCCGGTG 2893585
Query 16827 GCACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC-- 16882
| | ||||| ||||| || |||||| ||||| | | | | |||| ||| |
Sbjct 2893586 GGATCCCCTCCTTGTCCTGGATTTTTGCT--TTCACATTGTCGATTGTGT--CCGAACTT 2893641
Query 16883 TCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
|| |||| |||||||| || ||||||| || || ||||| || ||||||
Sbjct 2893642 TCAACCTCCAAAGTGATGGTCTTACCGGTCAAAGTCTTCACAAAGATTTGCATT 2893695
>seq19
Length=18159812
Score = 89.7 bits (98), Expect = 4e-13
Identities = 144/205 (70%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792
|| || ||||||||||| || ||||| || ||||||| ||| ||||||| | ||
Sbjct 4941092 TGAAGAGTGGACTCCTTCTGGATGTTATAATCGGCCAAAGTTCGACCGTCCTCAAGCTGC 4941033
Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850
||||| ||| | ||||||| ||| || || || | ||||| ||||| || |||
Sbjct 4941032 TTGCCAGCAAAGATAAGCCTCTGCTGATCGGGTGGGATACCCTCCTTGTCTTGGATCTTT 4940973
Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910
||| || || | | | | |||||| |||| || | ||||||||| |||||||
Sbjct 4940972 GCT--TTGACATTGTCAATGGTGTCGGAACTCTCCACCTCAAGGGTGATGGTCTTTCCGG 4940915
Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935
||| || || ||||| || |||||
Sbjct 4940914 TCAAGGTCTTAACAAAGATTTGCAT 4940890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405020989963270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |