Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16]
13,573 sequences; 609,203,021 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq4 89.7 4e-13
seq19 86.0 5e-12
seq9 82.4 6e-11
>seq4
Length=27333975
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
||||| |||||||| || || |||| || ||||||||||| |||| ||||
Sbjct 24477618 ATGCAGATTTTTGTGAAGACTTTGACTGGGAAAACCATTACTTTGGAGGTGGAAAGTTCT 24477677
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
||| | ||| | || ||| || ||| || || ||||| |||| |||||
Sbjct 24477678 GATACAATTGATAATGTGAAAGCTAAGATTCAGGATAAGGAAGGTATTCCACCGGATCAG 24477737
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| ||| | |||| ||| || || ||||| |||||| | ||| |||| |||||||||
Sbjct 24477738 CAGAGGTTGATTTTTGCAGGGAAGCAATTAGAAGATGGAAGGACTTTGGCTGATTATAAT 24477797
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || || || ||||| || || | || | |||||||| || ||
Sbjct 24477798 ATTCAGAAGGAGTCTACTCTTCACCTTGTTCTTCGTCTGCGTGGGGG 24477844
>seq19
Length=18159812
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 111187 ATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111246
|||||||| ||||| || || ||||||| || ||||| ||| | || ||| |
Sbjct 4940890 ATGCAAATCTTTGTTAAGACCTTGACCGGAAAGACCATCACCCTTGAGGTGGAGAGTTCC 4940949
Query 111247 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111306
|| | ||| | | || ||| ||| || ||||| || || | || ||||||
Sbjct 4940950 GACACCATTGACAATGTCAAAGCAAAGATCCAAGACAAGGAGGGTATCCCACCCGATCAG 4941009
Query 111307 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111366
|| |||||||| | ||| ||||| || | || || | |||| |||||||||||||
Sbjct 4941010 CAGAGGCTTATCTTTGCTGGCAAGCAGCTTGAGGACGGTCGAACTTTGGCCGATTATAAC 4941069
Query 111367 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111413
|| || || || || || || || | || |||||||| || |||||
Sbjct 4941070 ATCCAGAAGGAGTCCACTCTTCACCTTGTCTTGCGTCTCCGTGGTGG 4941116
>seq9
Length=21753712
Score = 82.4 bits (90), Expect = 6e-11
Identities = 90/120 (75%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 111280 GACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAA 111339
||||| ||||| | || || || |||||||| |||| ||| || || || |||||
Sbjct 2446104 GACAAGGAAGGTATCCCTCCTGACCAGCAAAGGCTGATTTTTGCTGGTAAGCAGCTGGAA 2446045
Query 111340 GATTCTAAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTG 111399
||| ||| | |||||||||||||||||||| ||||| ||||| ||||| || |||
Sbjct 2446044 GATGGACGCACTCTTGCCGATTATAATATACAAAAGGAATCCACACTTCATTTGGTCTTG 2445985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422970020326600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |