Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lupinus_20angustifolius_20[refseq_20GCF_5F001865875.1_202016-11-16] 13,573 sequences; 609,203,021 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq6 132 3e-26 seq19 95.1 9e-15 seq4 84.2 2e-11 >seq6 Length=33111450 Score = 132 bits (146), Expect = 3e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| |||| ||||| ||||| ||| | || |||| | Sbjct 6668878 ATGCAAATCTTTGTGAAAACCCTAACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 6668937 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | | || ||||| || || ||||| |||||| | || | | ||| Sbjct 6668938 GACACCATTGACAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATTCCACCAGATCAA 6668997 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| ||||| |||||||| || ||||| |||||| || ||| |||| ||||| || Sbjct 6668998 CAGAGGCTTATATTTGCTGGAAAGCAACTTGAAGATGGAAGGACTTTGGCAGATTATAAC 6669057 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| |||||||||||| ||||| | ||||| | |||||| Sbjct 6669058 ATCCAGAAGGAGTCTACTCTTCATTTGGTACTGCGTTTGAGGGGAGGA 6669105 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/235 (68%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| |||||| | || || | || || || || ||||| |||| ||| | Sbjct 6669105 AATGCAGATATTTGTGAAGACTCTGACTGGGAAGACTATTACATTGGAGGTGGAGAGTTC 6669164 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || ||| | | || | ||| |||||| || || ||||| | || | | || Sbjct 6669165 TGACACGATTGATAATGTGAAGGCAAAAATACAAGACAAGGAGGGGATTCCACCAGATCA 6669224 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| | ||||| ||||| ||||| | |||||| || ||| | || || || || Sbjct 6669225 ACAGAGGTTGATCTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTCTTGCTGACTATAA 6669284 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 ||||||||||| || |||||||| | || |||||| | || || || | |||| Sbjct 6669285 CATTCAGAAGGAGTCAACTCTTCACCTTGTCTTACGTCTTCGTGGTGGCTTTTAA 6669339 >seq19 Length=18159812 Score = 95.1 bits (104), Expect = 9e-15 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 21831 AAAATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCC 21890 |||||||| || || | ||||| ||||||| ||||| || ||| | ||| ||| | Sbjct 4557145 AAAATGCAGATCTTCGTGAAAACCCTAACGGGTAAAACAATAACCCTAGAAGTTGAAAGC 4557204 Query 21891 GCAGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAAC 21950 || || | | | || | || || || |||||||| || || || | | Sbjct 4557205 AGTGACACAATCGACAATGTGAAAGCCAAGATCCAAGATAAAGAAGGAGTTCCACCAGAT 4557264 Query 21951 CAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTAC 22010 ||||| | | || || ||||| |||||||| |||||| || ||| | || |||||| Sbjct 4557265 CAACAACGTTTGATTTTCGCTGGTAAACAACTTGAAGATGGAAGAACCCTAGCTGATTAC 4557324 Query 22011 AATATTCAGAAGGAATCTACTCTTCAT 22037 |||||||| |||||||||||||||||| Sbjct 4557325 AATATTCAAAAGGAATCTACTCTTCAT 4557351 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 ||||| || ||| | ||| | |||| || || | || |||||||| || ||||| ||| Sbjct 4941667 GATAAGGAAGGTATCCCTCCAGACCAGCAAAGGTTGATTTTTGCTGGAAAGCAACTTGAA 4941726 Query 21987 GATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTATTA 22046 ||| | || |||| |||||||||||||||||||| || || ||||| | || | Sbjct 4941727 GATGGACGTACCCTGGCAGATTACAATATTCAGAAGGAGTCCACCCTTCACCTTGTCCTT 4941786 Query 22047 CGTTTACGAGGAGGA 22061 ||||| | |||||| Sbjct 4941787 CGTTTGAGGGGAGGA 4941801 >seq4 Length=27333975 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| || | ||||| | || ||||||||||| ||| | ||| ||| | Sbjct 24477389 AATGCAAATCTTCGTAAAAACCCTCACCGGCAAAACCATAACCCTAGAAGTGGAGAGTTC 24477448 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | | | | ||| || ||| ||||| || || | || | | || Sbjct 24477449 CGACACCATCGACAACGTAAAGGCGAAGATTCAAGATAAGGAAGGAATTCCACCAGATCA 24477508 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 |||||| | || || ||||| |||||||| |||||| || ||| | || ||||| || Sbjct 24477509 GCAGAGATTGATTTTCGCTGGAAAACAACTTGAAGATGGAAGAACCCTAGCTGATTATAA 24477568 Query 22013 TATTCAGAAGGAATCTACTCTTCA 22036 ||| ||||||||||| || ||||| Sbjct 24477569 TATCCAGAAGGAATCAACACTTCA 24477592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358065558659842